| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174056
Identifier: 126174056
GI number: 126174056
Start: 2124019
End: 2124777
Strand: Reverse
Name: 126174056
Synonym: Sbal_1830
Alternate gene names: NA
Gene position: 2124777-2124019 (Counterclockwise)
Preceding gene: 126174057
Following gene: 126174055
Centisome position: 41.44
GC content: 44.53
Gene sequence:
>759_bases ATGAACACTAGTCTCATTGAGATTACCGTCGCCGAAATTAAAGAGTTGGCGGACGTAGAGCCAAAACAAGCGAGCAAACG CTTTGAAATCATTGCAAATACCATGAGCGACGAGCAATTAGTCGAAGTCATCGAACACATGGATATCGTCACGCTGACGC AAATCAACAGTCACCATGATATCTCTTGCCCTTCGATCATGTCTGAACTCATGACCCCAGAACAAATTCGCGACATCGTC TGTCAGCAACCTTTGTACTGGGAAGAAAAAATCAAAAACAATGCCGAAGAACTTATTCAGCATACCTTTGATTTTTTGAC CTATTTAATTCGCATCCAAGATAGCGAAGAAAAGCAAACTGCGATTCTAGAATGTATCGCCGAAGATCCAGCGGGCCTCT TCTATCTGTCGATCCCTTTCATCGAAATGATGTTAGGCGAAAAACATGAAGATGAAGACGGCTACACAGATCTCTATGAT GACGAAGAAGACACTGAAACCATCGGCTACGACAGCCGCGTCGCCAGTGAAGATGCACACAGCCTCAGCATAGACGACCC ACGCAGCCTAATGGCCTTAATCCACGAGCTTGCGCCCGATGTTGAAAAAGCCATTAAGAGTCTGCTGCGTAACGAAAGCT CAGGTTGGGAAATGATCATCAGCAAGTTTGTCAACGAGCTGGTTATTCAAGCCAAAGAGAAAAACCAAGTGACGGATGAA TACGCTGAAGTCGATGATATGTTTAGCTTTTTGGATTAA
Upstream 100 bases:
>100_bases GTGATGACAACGATTATGTTGGCACCTCAGATAACGACGACGATGATGAAGGCGAAGAGGAAGATGGCTACTACGATCAC TACGATGATGAGGACCGCTA
Downstream 100 bases:
>100_bases GGAATTATTTGATGCAACTGGTACTGCGTGATGTAGATCAAGGACCCTACCTAAGCAAGGTATTGATCCAAGGCCAAGCA GACGAAACGCTGAGCGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MNTSLIEITVAEIKELADVEPKQASKRFEIIANTMSDEQLVEVIEHMDIVTLTQINSHHDISCPSIMSELMTPEQIRDIV CQQPLYWEEKIKNNAEELIQHTFDFLTYLIRIQDSEEKQTAILECIAEDPAGLFYLSIPFIEMMLGEKHEDEDGYTDLYD DEEDTETIGYDSRVASEDAHSLSIDDPRSLMALIHELAPDVEKAIKSLLRNESSGWEMIISKFVNELVIQAKEKNQVTDE YAEVDDMFSFLD
Sequences:
>Translated_252_residues MNTSLIEITVAEIKELADVEPKQASKRFEIIANTMSDEQLVEVIEHMDIVTLTQINSHHDISCPSIMSELMTPEQIRDIV CQQPLYWEEKIKNNAEELIQHTFDFLTYLIRIQDSEEKQTAILECIAEDPAGLFYLSIPFIEMMLGEKHEDEDGYTDLYD DEEDTETIGYDSRVASEDAHSLSIDDPRSLMALIHELAPDVEKAIKSLLRNESSGWEMIISKFVNELVIQAKEKNQVTDE YAEVDDMFSFLD >Mature_252_residues MNTSLIEITVAEIKELADVEPKQASKRFEIIANTMSDEQLVEVIEHMDIVTLTQINSHHDISCPSIMSELMTPEQIRDIV CQQPLYWEEKIKNNAEELIQHTFDFLTYLIRIQDSEEKQTAILECIAEDPAGLFYLSIPFIEMMLGEKHEDEDGYTDLYD DEEDTETIGYDSRVASEDAHSLSIDDPRSLMALIHELAPDVEKAIKSLLRNESSGWEMIISKFVNELVIQAKEKNQVTDE YAEVDDMFSFLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28958; Mature: 28958
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSLIEITVAEIKELADVEPKQASKRFEIIANTMSDEQLVEVIEHMDIVTLTQINSHHD CCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHEEECCCCCC ISCPSIMSELMTPEQIRDIVCQQPLYWEEKIKNNAEELIQHTFDFLTYLIRIQDSEEKQT CCCHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHH AILECIAEDPAGLFYLSIPFIEMMLGEKHEDEDGYTDLYDDEEDTETIGYDSRVASEDAH HHHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCHHCCCCCC SLSIDDPRSLMALIHELAPDVEKAIKSLLRNESSGWEMIISKFVNELVIQAKEKNQVTDE CCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YAEVDDMFSFLD HHHHHHHHHHCC >Mature Secondary Structure MNTSLIEITVAEIKELADVEPKQASKRFEIIANTMSDEQLVEVIEHMDIVTLTQINSHHD CCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHEEECCCCCC ISCPSIMSELMTPEQIRDIVCQQPLYWEEKIKNNAEELIQHTFDFLTYLIRIQDSEEKQT CCCHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHH AILECIAEDPAGLFYLSIPFIEMMLGEKHEDEDGYTDLYDDEEDTETIGYDSRVASEDAH HHHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCHHCCCCCC SLSIDDPRSLMALIHELAPDVEKAIKSLLRNESSGWEMIISKFVNELVIQAKEKNQVTDE CCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YAEVDDMFSFLD HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA