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The map label for this gene is vdlD [H]

Identifier: 126173952

GI number: 126173952

Start: 2002783

End: 2003262

Strand: Direct

Name: vdlD [H]

Synonym: Sbal_1723

Alternate gene names: 126173952

Gene position: 2002783-2003262 (Clockwise)

Preceding gene: 126173951

Following gene: 126173953

Centisome position: 39.06

GC content: 49.38

Gene sequence:

>480_bases
ATGGCTGGTATCGATAGACAAAGTACCCTGAGATTTTTGTCAGAGCCTGCGGATGTAAATTTTGGTGGTAAGGTCCACGG
CGGCGCTGTGATGAAGTGGATCGATCTCGCGGCCTATGCATGTGCAGCGGGTTGGAGCGGTAAATATTGTATTACTGCCT
ATGCGGGCGGGATTCGTTTTGTGCAACCCATTTTAGTGGGCAACATAGTCGAAGTCAGTGCTAAGGTGATTTATACGGGG
AAAACTTCTATGCATATCGGTATCGATGTGCGGGCGGGCGATCCTAAAGTCTCTGAACGTCATCTCACCACTCACTGTAT
TGTGATCATGGTGGCTGTTGATGAACATGGCCAGCCTACGCCAGTGCCTGAGTGGATACCGCAAACTGAACATGATATTC
ATTTGCGCGATTCTGCGCTGCGCTTGATGGAAATGCGTAAAAAGATTGGCGCCGAAATGGAAGCCCACGTGGTGAAATAG

Upstream 100 bases:

>100_bases
GCCAATCGTAATTATCTTTACGCTATTGGGGATTTCTATCGTAAACTCAGCCTATTGCACGAAGACATTGAGCCACAGTG
GCTGAATAAGTTGAGGTTAT

Downstream 100 bases:

>100_bases
CCCCATAAATTAAATCAACAAAGGCGCTTAAGGCGCCTTTGTTGTCTCTGCCGAAAAGTGCGTTTGCCTGTGGGGCCGAT
TTCAACCTGACGCTATGCGG

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MAGIDRQSTLRFLSEPADVNFGGKVHGGAVMKWIDLAAYACAAGWSGKYCITAYAGGIRFVQPILVGNIVEVSAKVIYTG
KTSMHIGIDVRAGDPKVSERHLTTHCIVIMVAVDEHGQPTPVPEWIPQTEHDIHLRDSALRLMEMRKKIGAEMEAHVVK

Sequences:

>Translated_159_residues
MAGIDRQSTLRFLSEPADVNFGGKVHGGAVMKWIDLAAYACAAGWSGKYCITAYAGGIRFVQPILVGNIVEVSAKVIYTG
KTSMHIGIDVRAGDPKVSERHLTTHCIVIMVAVDEHGQPTPVPEWIPQTEHDIHLRDSALRLMEMRKKIGAEMEAHVVK
>Mature_158_residues
AGIDRQSTLRFLSEPADVNFGGKVHGGAVMKWIDLAAYACAAGWSGKYCITAYAGGIRFVQPILVGNIVEVSAKVIYTGK
TSMHIGIDVRAGDPKVSERHLTTHCIVIMVAVDEHGQPTPVPEWIPQTEHDIHLRDSALRLMEMRKKIGAEMEAHVVK

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI32528284, Length=146, Percent_Identity=30.8219178082192, Blast_Score=68, Evalue=3e-12,
Organism=Homo sapiens, GI32528286, Length=146, Percent_Identity=30.8219178082192, Blast_Score=68, Evalue=3e-12,
Organism=Homo sapiens, GI75709208, Length=146, Percent_Identity=30.8219178082192, Blast_Score=68, Evalue=3e-12,
Organism=Homo sapiens, GI32528282, Length=146, Percent_Identity=30.8219178082192, Blast_Score=68, Evalue=3e-12,
Organism=Escherichia coli, GI1787506, Length=117, Percent_Identity=30.7692307692308, Blast_Score=64, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 17389; Mature: 17258

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGIDRQSTLRFLSEPADVNFGGKVHGGAVMKWIDLAAYACAAGWSGKYCITAYAGGIRF
CCCCCHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHH
VQPILVGNIVEVSAKVIYTGKTSMHIGIDVRAGDPKVSERHLTTHCIVIMVAVDEHGQPT
HHHHHHCCEEEEEEEEEEECCCEEEEEEEEECCCCCCCCCEEEEEEEEEEEEECCCCCCC
PVPEWIPQTEHDIHLRDSALRLMEMRKKIGAEMEAHVVK
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCEEEECC
>Mature Secondary Structure 
AGIDRQSTLRFLSEPADVNFGGKVHGGAVMKWIDLAAYACAAGWSGKYCITAYAGGIRF
CCCCHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHH
VQPILVGNIVEVSAKVIYTGKTSMHIGIDVRAGDPKVSERHLTTHCIVIMVAVDEHGQPT
HHHHHHCCEEEEEEEEEEECCCEEEEEEEEECCCCCCCCCEEEEEEEEEEEEECCCCCCC
PVPEWIPQTEHDIHLRDSALRLMEMRKKIGAEMEAHVVK
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]