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The map label for this gene is ytfH [C]

Identifier: 126173934

GI number: 126173934

Start: 1983233

End: 1983688

Strand: Direct

Name: ytfH [C]

Synonym: Sbal_1705

Alternate gene names: 126173934

Gene position: 1983233-1983688 (Clockwise)

Preceding gene: 126173932

Following gene: 126173935

Centisome position: 38.68

GC content: 48.68

Gene sequence:

>456_bases
ATGAAGCGCAAGAATCTAAGTGATACTGAATGCCCTGTTGCACGTTCGCTAGATGTGATCGGTGACGGGTGGTCGCTTCT
TATCATACGAGACGCTTTCGACGGGATAAGCCGTTTTAGTGCTTTTCAAAAGAATCTCGGTATTGCACGTAGCATGTTGA
CAGCTCGTTTGCTGGCTCTGGTTGAGCAGGGGGTATTGGAGACCATACCGGCTTCCGATGGTACGGCTTATCAGGAATAT
GTGTTGACTGAGATGGGGCGTGGGCTTTTTCCAGTGATTATCGCTTTGCGCCAGTGGGGCGAGGATCACCTTTACCAGCC
TGATGAGCAGCATTCGGTGTTAATTGACACCCAAACGGGTGAACCGGTAACGCGTCTTGAACTACGTTCTAAAGAGAATC
AAGTTCTTGAATGGCGAGATACTACCGTTAGGAAAGTATCGCCAGATTTGAAGTAG

Upstream 100 bases:

>100_bases
TAGATTGTTGGTTGATCTAGTCTTATTTTAAGACTTAATTTGCAGGGCTAATAAATGACCGTATAATGAGACAGTTATGT
GAACCCAAAAGGACAACTAA

Downstream 100 bases:

>100_bases
TGGAACCGAGGAGAAAAGCGCCTAGTGTTCATATTGGGAGAAGTTTTGGGTTGTTATGCCTGAATCGATGGCACACGATA
CCGTCCTGTTCTATCAGCTA

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MKRKNLSDTECPVARSLDVIGDGWSLLIIRDAFDGISRFSAFQKNLGIARSMLTARLLALVEQGVLETIPASDGTAYQEY
VLTEMGRGLFPVIIALRQWGEDHLYQPDEQHSVLIDTQTGEPVTRLELRSKENQVLEWRDTTVRKVSPDLK

Sequences:

>Translated_151_residues
MKRKNLSDTECPVARSLDVIGDGWSLLIIRDAFDGISRFSAFQKNLGIARSMLTARLLALVEQGVLETIPASDGTAYQEY
VLTEMGRGLFPVIIALRQWGEDHLYQPDEQHSVLIDTQTGEPVTRLELRSKENQVLEWRDTTVRKVSPDLK
>Mature_151_residues
MKRKNLSDTECPVARSLDVIGDGWSLLIIRDAFDGISRFSAFQKNLGIARSMLTARLLALVEQGVLETIPASDGTAYQEY
VLTEMGRGLFPVIIALRQWGEDHLYQPDEQHSVLIDTQTGEPVTRLELRSKENQVLEWRDTTVRKVSPDLK

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 17057; Mature: 17057

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKNLSDTECPVARSLDVIGDGWSLLIIRDAFDGISRFSAFQKNLGIARSMLTARLLAL
CCCCCCCCCCCCHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEQGVLETIPASDGTAYQEYVLTEMGRGLFPVIIALRQWGEDHLYQPDEQHSVLIDTQTG
HHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCC
EPVTRLELRSKENQVLEWRDTTVRKVSPDLK
CCHHHHHHHCCCCCEEHHCCCHHHHCCCCCC
>Mature Secondary Structure
MKRKNLSDTECPVARSLDVIGDGWSLLIIRDAFDGISRFSAFQKNLGIARSMLTARLLAL
CCCCCCCCCCCCHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEQGVLETIPASDGTAYQEYVLTEMGRGLFPVIIALRQWGEDHLYQPDEQHSVLIDTQTG
HHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCC
EPVTRLELRSKENQVLEWRDTTVRKVSPDLK
CCHHHHHHHCCCCCEEHHCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]