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The map label for this gene is ohrR [H]

Identifier: 126173895

GI number: 126173895

Start: 1943145

End: 1943543

Strand: Direct

Name: ohrR [H]

Synonym: Sbal_1663

Alternate gene names: 126173895

Gene position: 1943145-1943543 (Clockwise)

Preceding gene: 126173893

Following gene: 126173896

Centisome position: 37.9

GC content: 49.37

Gene sequence:

>399_bases
GTGTGCTTCGCGTTATATTCCGCGAGTAATGCCTTAGTGCGCGCTTATCGTCCTTTACTCGAGGCATACGAGTTAACTTT
CCCTCAATATCTGGTGATGCAAACCCTGTGGCGTCAAAATGGCTGCAGTCAAACCCAGCTATCGGCGGCGACTAAGCTCG
ATATGGGGACGCTAACGCCTATCGTTAAGCGGTTAGAGGTAAAAGGCTTGATCACGCGTTTGGCCTGCGTTGAAGATGAG
CGGAAAAAATTGATCACTCTGACGACTCAGGGAGAGGCGATTAAGCATGAAGCCCTAGCCTTAAAGCAAACCTTGCTGAA
TAAAGTGCAGATGGATGCCGAGGCGCTCGATTTACTGAGGCGGCAATGTCTTGCCCTTATTGAAGATTTACAGTCCTAG

Upstream 100 bases:

>100_bases
CCCAGAGCTCGGATCTACAGAGCAGAGTCAAAACCCAGAGCTACAAAACCCTGAGTCACAAAGCCTAGCGCCAAGTGATG
CACTGTGTTTATCCGATAAT

Downstream 100 bases:

>100_bases
AGATAAAGCTACTGGTGCTGTTCGCTACCCGAGAATTCAGTCTCTGCACAGATTAATACTTGATTGGCTTAGTTTTTGCT
TTAAACCGTCATTGAGTCTT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MCFALYSASNALVRAYRPLLEAYELTFPQYLVMQTLWRQNGCSQTQLSAATKLDMGTLTPIVKRLEVKGLITRLACVEDE
RKKLITLTTQGEAIKHEALALKQTLLNKVQMDAEALDLLRRQCLALIEDLQS

Sequences:

>Translated_132_residues
MCFALYSASNALVRAYRPLLEAYELTFPQYLVMQTLWRQNGCSQTQLSAATKLDMGTLTPIVKRLEVKGLITRLACVEDE
RKKLITLTTQGEAIKHEALALKQTLLNKVQMDAEALDLLRRQCLALIEDLQS
>Mature_132_residues
MCFALYSASNALVRAYRPLLEAYELTFPQYLVMQTLWRQNGCSQTQLSAATKLDMGTLTPIVKRLEVKGLITRLACVEDE
RKKLITLTTQGEAIKHEALALKQTLLNKVQMDAEALDLLRRQCLALIEDLQS

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 14914; Mature: 14914

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: PS50995 HTH_MARR_2 ; PS00226 IF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCFALYSASNALVRAYRPLLEAYELTFPQYLVMQTLWRQNGCSQTQLSAATKLDMGTLTP
CEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHH
IVKRLEVKGLITRLACVEDERKKLITLTTQGEAIKHEALALKQTLLNKVQMDAEALDLLR
HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RQCLALIEDLQS
HHHHHHHHHHCC
>Mature Secondary Structure
MCFALYSASNALVRAYRPLLEAYELTFPQYLVMQTLWRQNGCSQTQLSAATKLDMGTLTP
CEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHH
IVKRLEVKGLITRLACVEDERKKLITLTTQGEAIKHEALALKQTLLNKVQMDAEALDLLR
HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RQCLALIEDLQS
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]