| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173792
Identifier: 126173792
GI number: 126173792
Start: 1812607
End: 1814145
Strand: Direct
Name: 126173792
Synonym: Sbal_1558
Alternate gene names: NA
Gene position: 1812607-1814145 (Clockwise)
Preceding gene: 126173791
Following gene: 126173793
Centisome position: 35.35
GC content: 47.24
Gene sequence:
>1539_bases ATGAAACTTAACATTGCCGCCATACTCATGCTCTCAGTTTGTTCATTGACTACTGTCAGTGCAAAAGCTGCAGACAAACA AGCAACTGATACAGCATCTAATGTAACTTCCACTTGTACCGGAGCTTACCCAAGTTACTTCCAAGACCCCGCGTTCAATA AAACCGGTATGTGGGACAATCAAGTCATCATCAACCAAGCTTATTCGGGCTGGAAGGGACCTATTTTTAGCTTGAGCGAC GCCTATTCGAGTGCGCAGCAAGATAATGCTGCACCTTGGCTTGAATTCAATCCCTTCGATAAAAGTCTGAGTGAGACAGA GAAAAATACCCAAGCGTGGAAATACCTTTGGGCTGTGATGAAGTACATTCAAGAGGGGAACATCGACAAAGGCGATATCA GTAAGGACTGGGATTTGTGTAATAACAAGGTTCGCTCTTGGTACCATATTCCCTATCAGACCTATGATCCTATGAGTGGG CGGGAATTTATCCACGGCTTGACCCGCGAAGCCCCCGTCACTATGGAGATAAAAGGCCAAGGCGATTTGAAAACCACTAT GTGGGCGGTGGGGTTTTATAATCCTCAGGCGGCTAATAGCATTGGCAAGGTATGGACAGGAGCGCCGTCACCTGTGATGC CGCAGCAAAACTTTGTATTTAATGAAGGCAGTGTGATCGGCAAATTACTGTTCACCACAGCAACGCCCAATAATTATCCT TTCCTCGAAAACGTACCCGTTTGGCAAGCCAATATCAGCGCCAGTGATTTCTGCGAATGTAAAAATGCCGATGGCAGTGC TTGCAGTTTCCAACAGGAAACAGAGCAATGCCCGCGTTCTGTCGCCGATGTGTACTTATTACAGTTTGACATCGCAGTGC GTGACAGCCGCTCGCCCGTGGGCTGGGCATATGGTACTTTTGTCGCCGATGGTCAGTTTAAAGCGAAAGAGAAAAATCCT TGGGATCGTATCTCTCCACTGGGATTAATGTGGGGTAATGATACGCCGCCTGCCACAGTGGGAGCGGCAGCATTCCCTCA AAACCCAATCACAGGGCTTAAGGATAGCGCTGTATTTCAAGAGGTCGTTGGTCGCTTGAATGAGCACACCAATGCGGGAC ACTTAGGGTGTAACGGACGTTTAAATGGCCCTGCGGATAACGCATTAAGTAGCTGTTTATCTTGCCATCAAACCGCATCC GTTCCTGATAGCACTAATAATACTCCGGCAATCATGTACCAATTTGCCTCGTATCAACAGCCGGGCAGTGGTCAATGCTT AACATCGCCCAGCGCCCTCGATTTATCGATTGACCAAGTGTATTTCAAAACCTTTATGTGCTCAGCATCTTTTGTTGGGC CAAGCAACATAGTCCCCGTACCTAAATATGCCCAAGGGCAAAAAGAGTGGATTTCAACTGACTTTTCATTACAGCTCAGC ATCAGTCTCACCCAGTGGCAAGAATGGCAAGAAGACCAAGATAACCTGAAAAAGAACATCAAAGTGCGCGTATTCGAGGG CACTTTACCTTCTCGCTAA
Upstream 100 bases:
>100_bases TGAGGATATTAAAAATTAGTCTATGCTTACTTTGAGTCGCCGCTGGTGCCGAGACTCACAAAGGGAGTTTTTAGGACTAA TACTCTTCAAGGACGATATT
Downstream 100 bases:
>100_bases TGTTGAAGTTTGTGTAACTAATTGTATTTAGTACGCCATCTCAGATTTGACGGCATATTTCTACTTTTATATTGTATTTC AATAACAAGGGACTCAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MKLNIAAILMLSVCSLTTVSAKAADKQATDTASNVTSTCTGAYPSYFQDPAFNKTGMWDNQVIINQAYSGWKGPIFSLSD AYSSAQQDNAAPWLEFNPFDKSLSETEKNTQAWKYLWAVMKYIQEGNIDKGDISKDWDLCNNKVRSWYHIPYQTYDPMSG REFIHGLTREAPVTMEIKGQGDLKTTMWAVGFYNPQAANSIGKVWTGAPSPVMPQQNFVFNEGSVIGKLLFTTATPNNYP FLENVPVWQANISASDFCECKNADGSACSFQQETEQCPRSVADVYLLQFDIAVRDSRSPVGWAYGTFVADGQFKAKEKNP WDRISPLGLMWGNDTPPATVGAAAFPQNPITGLKDSAVFQEVVGRLNEHTNAGHLGCNGRLNGPADNALSSCLSCHQTAS VPDSTNNTPAIMYQFASYQQPGSGQCLTSPSALDLSIDQVYFKTFMCSASFVGPSNIVPVPKYAQGQKEWISTDFSLQLS ISLTQWQEWQEDQDNLKKNIKVRVFEGTLPSR
Sequences:
>Translated_512_residues MKLNIAAILMLSVCSLTTVSAKAADKQATDTASNVTSTCTGAYPSYFQDPAFNKTGMWDNQVIINQAYSGWKGPIFSLSD AYSSAQQDNAAPWLEFNPFDKSLSETEKNTQAWKYLWAVMKYIQEGNIDKGDISKDWDLCNNKVRSWYHIPYQTYDPMSG REFIHGLTREAPVTMEIKGQGDLKTTMWAVGFYNPQAANSIGKVWTGAPSPVMPQQNFVFNEGSVIGKLLFTTATPNNYP FLENVPVWQANISASDFCECKNADGSACSFQQETEQCPRSVADVYLLQFDIAVRDSRSPVGWAYGTFVADGQFKAKEKNP WDRISPLGLMWGNDTPPATVGAAAFPQNPITGLKDSAVFQEVVGRLNEHTNAGHLGCNGRLNGPADNALSSCLSCHQTAS VPDSTNNTPAIMYQFASYQQPGSGQCLTSPSALDLSIDQVYFKTFMCSASFVGPSNIVPVPKYAQGQKEWISTDFSLQLS ISLTQWQEWQEDQDNLKKNIKVRVFEGTLPSR >Mature_512_residues MKLNIAAILMLSVCSLTTVSAKAADKQATDTASNVTSTCTGAYPSYFQDPAFNKTGMWDNQVIINQAYSGWKGPIFSLSD AYSSAQQDNAAPWLEFNPFDKSLSETEKNTQAWKYLWAVMKYIQEGNIDKGDISKDWDLCNNKVRSWYHIPYQTYDPMSG REFIHGLTREAPVTMEIKGQGDLKTTMWAVGFYNPQAANSIGKVWTGAPSPVMPQQNFVFNEGSVIGKLLFTTATPNNYP FLENVPVWQANISASDFCECKNADGSACSFQQETEQCPRSVADVYLLQFDIAVRDSRSPVGWAYGTFVADGQFKAKEKNP WDRISPLGLMWGNDTPPATVGAAAFPQNPITGLKDSAVFQEVVGRLNEHTNAGHLGCNGRLNGPADNALSSCLSCHQTAS VPDSTNNTPAIMYQFASYQQPGSGQCLTSPSALDLSIDQVYFKTFMCSASFVGPSNIVPVPKYAQGQKEWISTDFSLQLS ISLTQWQEWQEDQDNLKKNIKVRVFEGTLPSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56491; Mature: 56491
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNIAAILMLSVCSLTTVSAKAADKQATDTASNVTSTCTGAYPSYFQDPAFNKTGMWDN CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCC QVIINQAYSGWKGPIFSLSDAYSSAQQDNAAPWLEFNPFDKSLSETEKNTQAWKYLWAVM EEEEECCCCCCCCCCEEHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH KYIQEGNIDKGDISKDWDLCNNKVRSWYHIPYQTYDPMSGREFIHGLTREAPVTMEIKGQ HHHHHCCCCCCCCCCCHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHCCCCCEEEEECCC GDLKTTMWAVGFYNPQAANSIGKVWTGAPSPVMPQQNFVFNEGSVIGKLLFTTATPNNYP CCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEEEEECCCCCCC FLENVPVWQANISASDFCECKNADGSACSFQQETEQCPRSVADVYLLQFDIAVRDSRSPV CCCCCCCEEECCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEEEECCCCCC GWAYGTFVADGQFKAKEKNPWDRISPLGLMWGNDTPPATVGAAAFPQNPITGLKDSAVFQ CEEEEEEEECCCEECCCCCCCHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHH EVVGRLNEHTNAGHLGCNGRLNGPADNALSSCLSCHQTASVPDSTNNTPAIMYQFASYQQ HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCC PGSGQCLTSPSALDLSIDQVYFKTFMCSASFVGPSNIVPVPKYAQGQKEWISTDFSLQLS CCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEE ISLTQWQEWQEDQDNLKKNIKVRVFEGTLPSR EEHHHHHHHHHHHHHHHCCCEEEEEECCCCCC >Mature Secondary Structure MKLNIAAILMLSVCSLTTVSAKAADKQATDTASNVTSTCTGAYPSYFQDPAFNKTGMWDN CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCC QVIINQAYSGWKGPIFSLSDAYSSAQQDNAAPWLEFNPFDKSLSETEKNTQAWKYLWAVM EEEEECCCCCCCCCCEEHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH KYIQEGNIDKGDISKDWDLCNNKVRSWYHIPYQTYDPMSGREFIHGLTREAPVTMEIKGQ HHHHHCCCCCCCCCCCHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHCCCCCEEEEECCC GDLKTTMWAVGFYNPQAANSIGKVWTGAPSPVMPQQNFVFNEGSVIGKLLFTTATPNNYP CCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEEEEECCCCCCC FLENVPVWQANISASDFCECKNADGSACSFQQETEQCPRSVADVYLLQFDIAVRDSRSPV CCCCCCCEEECCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEEEECCCCCC GWAYGTFVADGQFKAKEKNPWDRISPLGLMWGNDTPPATVGAAAFPQNPITGLKDSAVFQ CEEEEEEEECCCEECCCCCCCHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHH EVVGRLNEHTNAGHLGCNGRLNGPADNALSSCLSCHQTASVPDSTNNTPAIMYQFASYQQ HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCC PGSGQCLTSPSALDLSIDQVYFKTFMCSASFVGPSNIVPVPKYAQGQKEWISTDFSLQLS CCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEE ISLTQWQEWQEDQDNLKKNIKVRVFEGTLPSR EEHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA