| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yuxL [H]
Identifier: 126173741
GI number: 126173741
Start: 1746630
End: 1748678
Strand: Direct
Name: yuxL [H]
Synonym: Sbal_1503
Alternate gene names: 126173741
Gene position: 1746630-1748678 (Clockwise)
Preceding gene: 126173740
Following gene: 126173743
Centisome position: 34.06
GC content: 49.19
Gene sequence:
>2049_bases ATGAAGTTACATGGATATTTATGGGTGCTAGGGAGTTTGTTTTGTTTGGGGGCTTGCGAGCGCTCGAACAAAGAAACACC GCATCTTAGTGATAATGGTGGGCGTATTGTTGCGCCCTATGGCAGTTGGCTGTCTCCCTTATCGGCGAATGATGTATTTG AACAGGCCGATAATGTCGCCGAGTTACAAAGCGTAGATGGGGCGATTTATTTCTCTGAATCTGATGGTGATAAGCAAGGC CAAGTAGGGATTAAGCGTCTCGATAAAAAGGGCAATATCGCCGACGTCGTGCCGCCAAGCTTTAATGTTAAATCCGCCGT TCATGAATACGGCGGCGCCGCCTTTTTAGGGATAGGCCAGAGTTTATTTGCCACTAAGGCACATGATCAACTGTTTTATC GTTTCGCCCCTAATCAACCCCCCCTGCCGTTAACGCCTAATGGCACCCGTCATGCTGACTGTATCGCTTATCCTAAAGGG TCACGGATTATCTGTGTGCGCGAGGATCATCGCCAGCCCGGTGAGCCCAAGGCGAGCCTTGTGACAATCAATCTTAACTT TGCCGGCGAAGGCGATACCTTTGTCTCGGGGCATGACTTTATTTCTTCGCCCGCTATCTCGCCCGATAACAGCCAACTGG CGTGGATCACGTGGGAACATCCCTATATGCCATGGGATAACAGTATTCTCTGGCTTGGCGATCTCGACCGTAAAGGGCAA CTGCACAATATTCGTAAGGTAAACACGCCTACGGATTCTTCCGTGACACAGCCATTATTCAGCCCTGATGGACAATTATA TGTCGTGTCGGATATCAGTAACTGGTGGAATATCTATCGAGTCACGGCACAAAATACCTTAGCCCCAGTGCTGAACAAAA AAGCCGAGTTTGCCGTGGCCGATTGGTATTTAGGCAATCACAACTACGCCTTCGAATCCGAAAAAACCATCATTGCCAGC TATATGCTTGGCAGTCAGGCGGCGCTAATTCGGCTGCATTTGGATTCGGGTTTGACCGAGTCCTTAGCCGTCGATTTCGG CGAAATCACCCAAGTGATCAGGGGCGAGGATGCCGTTTATTTTGTTGGCGCTAAGGCAACGCCAGAGAAGGGTATTTATA AAGTCATCGGTCGTGGCACTGAGTTGGTGTATACGCCTAACTTGCCAAAGCTTGATCCTAATTATATTTCCCGGGCAAAA AATATTACCTTTAAAACTGGTGTTAACCAGCAAGCCTACGGTTATTTTTATGGGCCGGTTAACCCCAACTATACTGCGCC CCATGATACCCGCCCGCCGCTCATAGTGATGTTGCACGGCGGCCCAACGGCGCGGGCGAGTCTGGCTTATCGCAGTGATA TTCAATTTTGGACCAGCCGTGGCTTTGCGGTGCTCGATGTTAATTTTCGAGGTAGCAGTGGTTTTGGCCGCGCCTATCGT CAGAGTATTTACGGCAAATGGGGTCAGGCTGATGTGGAAGATGCGGTCAATGCGGCCCGTTATTTAGTCGATAAAGGCTG GGTTGATGGACAAAAACTGGCGATTCGAGGCGTAAGCGCAGGCGGGTTAACTGTGATGTCGTCCTTGGCTTTTTATGATG TGTTTCAAGCGGGTGTCAGTTACGCGGGGATCAGTGATTTTGAACAGCTGGCCAAGAGTACCCATAAGTTTGAGACGGGG TATTTAGATCAGCTCATTGGTCCCTATGCGAACAATCAAGCCCGTTATAGGGAGTTGTCGCCGTTGTATCATCTTGAAGG CTTGAATGAGCCCTTGTTAATTTTTCAAGGCTTGCGGGATCAAATTGTGCCGCCACAGCAGTCGCGAAAAATTTATGAGG CATTAAAAGTCAGAGGTGTGCCAACGGCTTATATTGCCTATCAAGATGAGCCACACGGCGGTTGGAAGCCAGAACACAGG GCCGCAGGATTAGAGACTGAACTCGCATTTTATGGGCAAGTGTTTAACTTTACCCCTGCAGGTAAGTTGGCAACATTGGT ACTGGATAATGCTGCGGCGTTAAAGCCGACCTTAGTCCGCAATCAATAA
Upstream 100 bases:
>100_bases AGTGGTAAATTGGTTCTTAAAAAAATTTAAAAAATAACCAATTTCTGCAAGTTCCTATTTTGTTTCGGTTTGTGCAGTTG GCAAACATTGGGGAGAAACA
Downstream 100 bases:
>100_bases CGCAGTATTTACCGTTATGACTCTTGGCCGTTGCTAGTGCGACTGGCTTTACAACAACACTCAGAGCCTGCATCGTGCAG GCTTTGGTCTTTTTGGGATT
Product: peptidase S9 prolyl oligopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 682; Mature: 682
Protein sequence:
>682_residues MKLHGYLWVLGSLFCLGACERSNKETPHLSDNGGRIVAPYGSWLSPLSANDVFEQADNVAELQSVDGAIYFSESDGDKQG QVGIKRLDKKGNIADVVPPSFNVKSAVHEYGGAAFLGIGQSLFATKAHDQLFYRFAPNQPPLPLTPNGTRHADCIAYPKG SRIICVREDHRQPGEPKASLVTINLNFAGEGDTFVSGHDFISSPAISPDNSQLAWITWEHPYMPWDNSILWLGDLDRKGQ LHNIRKVNTPTDSSVTQPLFSPDGQLYVVSDISNWWNIYRVTAQNTLAPVLNKKAEFAVADWYLGNHNYAFESEKTIIAS YMLGSQAALIRLHLDSGLTESLAVDFGEITQVIRGEDAVYFVGAKATPEKGIYKVIGRGTELVYTPNLPKLDPNYISRAK NITFKTGVNQQAYGYFYGPVNPNYTAPHDTRPPLIVMLHGGPTARASLAYRSDIQFWTSRGFAVLDVNFRGSSGFGRAYR QSIYGKWGQADVEDAVNAARYLVDKGWVDGQKLAIRGVSAGGLTVMSSLAFYDVFQAGVSYAGISDFEQLAKSTHKFETG YLDQLIGPYANNQARYRELSPLYHLEGLNEPLLIFQGLRDQIVPPQQSRKIYEALKVRGVPTAYIAYQDEPHGGWKPEHR AAGLETELAFYGQVFNFTPAGKLATLVLDNAAALKPTLVRNQ
Sequences:
>Translated_682_residues MKLHGYLWVLGSLFCLGACERSNKETPHLSDNGGRIVAPYGSWLSPLSANDVFEQADNVAELQSVDGAIYFSESDGDKQG QVGIKRLDKKGNIADVVPPSFNVKSAVHEYGGAAFLGIGQSLFATKAHDQLFYRFAPNQPPLPLTPNGTRHADCIAYPKG SRIICVREDHRQPGEPKASLVTINLNFAGEGDTFVSGHDFISSPAISPDNSQLAWITWEHPYMPWDNSILWLGDLDRKGQ LHNIRKVNTPTDSSVTQPLFSPDGQLYVVSDISNWWNIYRVTAQNTLAPVLNKKAEFAVADWYLGNHNYAFESEKTIIAS YMLGSQAALIRLHLDSGLTESLAVDFGEITQVIRGEDAVYFVGAKATPEKGIYKVIGRGTELVYTPNLPKLDPNYISRAK NITFKTGVNQQAYGYFYGPVNPNYTAPHDTRPPLIVMLHGGPTARASLAYRSDIQFWTSRGFAVLDVNFRGSSGFGRAYR QSIYGKWGQADVEDAVNAARYLVDKGWVDGQKLAIRGVSAGGLTVMSSLAFYDVFQAGVSYAGISDFEQLAKSTHKFETG YLDQLIGPYANNQARYRELSPLYHLEGLNEPLLIFQGLRDQIVPPQQSRKIYEALKVRGVPTAYIAYQDEPHGGWKPEHR AAGLETELAFYGQVFNFTPAGKLATLVLDNAAALKPTLVRNQ >Mature_682_residues MKLHGYLWVLGSLFCLGACERSNKETPHLSDNGGRIVAPYGSWLSPLSANDVFEQADNVAELQSVDGAIYFSESDGDKQG QVGIKRLDKKGNIADVVPPSFNVKSAVHEYGGAAFLGIGQSLFATKAHDQLFYRFAPNQPPLPLTPNGTRHADCIAYPKG SRIICVREDHRQPGEPKASLVTINLNFAGEGDTFVSGHDFISSPAISPDNSQLAWITWEHPYMPWDNSILWLGDLDRKGQ LHNIRKVNTPTDSSVTQPLFSPDGQLYVVSDISNWWNIYRVTAQNTLAPVLNKKAEFAVADWYLGNHNYAFESEKTIIAS YMLGSQAALIRLHLDSGLTESLAVDFGEITQVIRGEDAVYFVGAKATPEKGIYKVIGRGTELVYTPNLPKLDPNYISRAK NITFKTGVNQQAYGYFYGPVNPNYTAPHDTRPPLIVMLHGGPTARASLAYRSDIQFWTSRGFAVLDVNFRGSSGFGRAYR QSIYGKWGQADVEDAVNAARYLVDKGWVDGQKLAIRGVSAGGLTVMSSLAFYDVFQAGVSYAGISDFEQLAKSTHKFETG YLDQLIGPYANNQARYRELSPLYHLEGLNEPLLIFQGLRDQIVPPQQSRKIYEALKVRGVPTAYIAYQDEPHGGWKPEHR AAGLETELAFYGQVFNFTPAGKLATLVLDNAAALKPTLVRNQ
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Homo sapiens, GI23510451, Length=216, Percent_Identity=29.6296296296296, Blast_Score=90, Evalue=6e-18, Organism=Homo sapiens, GI194394146, Length=260, Percent_Identity=26.9230769230769, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI16933540, Length=210, Percent_Identity=27.6190476190476, Blast_Score=67, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17552908, Length=621, Percent_Identity=30.5958132045089, Blast_Score=253, Evalue=3e-67, Organism=Caenorhabditis elegans, GI25144537, Length=213, Percent_Identity=31.924882629108, Blast_Score=116, Evalue=3e-26, Organism=Caenorhabditis elegans, GI25144540, Length=213, Percent_Identity=31.924882629108, Blast_Score=116, Evalue=5e-26, Organism=Caenorhabditis elegans, GI25149159, Length=210, Percent_Identity=30.952380952381, Blast_Score=84, Evalue=3e-16, Organism=Caenorhabditis elegans, GI25144543, Length=134, Percent_Identity=34.3283582089552, Blast_Score=84, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17550672, Length=210, Percent_Identity=25.7142857142857, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI45550825, Length=261, Percent_Identity=24.1379310344828, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI45553511, Length=261, Percent_Identity=24.1379310344828, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI45551969, Length=261, Percent_Identity=24.1379310344828, Blast_Score=78, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR011659 - InterPro: IPR001375 [H]
Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 75246; Mature: 75246
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLHGYLWVLGSLFCLGACERSNKETPHLSDNGGRIVAPYGSWLSPLSANDVFEQADNVA CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCHH ELQSVDGAIYFSESDGDKQGQVGIKRLDKKGNIADVVPPSFNVKSAVHEYGGAAFLGIGQ HHHHCCCEEEEECCCCCCCCCHHHHHHCCCCCEEECCCCCCCHHHHHHHCCCEEEEECCH SLFATKAHDQLFYRFAPNQPPLPLTPNGTRHADCIAYPKGSRIICVREDHRQPGEPKASL HHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCEEE VTINLNFAGEGDTFVSGHDFISSPAISPDNSQLAWITWEHPYMPWDNSILWLGDLDRKGQ EEEEEEECCCCCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCC LHNIRKVNTPTDSSVTQPLFSPDGQLYVVSDISNWWNIYRVTAQNTLAPVLNKKAEFAVA CCCCEECCCCCCCHHCCCCCCCCCCEEEEECCCCCEEEEEEECCCHHHHHHCCCCCEEEE DWYLGNHNYAFESEKTIIASYMLGSQAALIRLHLDSGLTESLAVDFGEITQVIRGEDAVY EEEECCCCEEECCCCEEEEEEHHCCCEEEEEEEECCCCCHHHHCCHHHHHHHHCCCCEEE FVGAKATPEKGIYKVIGRGTELVYTPNLPKLDPNYISRAKNITFKTGVNQQAYGYFYGPV EEECCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHCCCCEEECCCCCCCCEEEECCC NPNYTAPHDTRPPLIVMLHGGPTARASLAYRSDIQFWTSRGFAVLDVNFRGSSGFGRAYR CCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHCCCEEEEEEEECCCCCCCHHHH QSIYGKWGQADVEDAVNAARYLVDKGWVDGQKLAIRGVSAGGLTVMSSLAFYDVFQAGVS HHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCC YAGISDFEQLAKSTHKFETGYLDQLIGPYANNQARYRELSPLYHLEGLNEPLLIFQGLRD CCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHCCCHHHHCCCCCHHHHHHCHHH QIVPPQQSRKIYEALKVRGVPTAYIAYQDEPHGGWKPEHRAAGLETELAFYGQVFNFTPA HCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHCCCCHHHEEHHHEEECCCC GKLATLVLDNAAALKPTLVRNQ CCEEEEEECCCHHCCCCCCCCC >Mature Secondary Structure MKLHGYLWVLGSLFCLGACERSNKETPHLSDNGGRIVAPYGSWLSPLSANDVFEQADNVA CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCHH ELQSVDGAIYFSESDGDKQGQVGIKRLDKKGNIADVVPPSFNVKSAVHEYGGAAFLGIGQ HHHHCCCEEEEECCCCCCCCCHHHHHHCCCCCEEECCCCCCCHHHHHHHCCCEEEEECCH SLFATKAHDQLFYRFAPNQPPLPLTPNGTRHADCIAYPKGSRIICVREDHRQPGEPKASL HHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCEEE VTINLNFAGEGDTFVSGHDFISSPAISPDNSQLAWITWEHPYMPWDNSILWLGDLDRKGQ EEEEEEECCCCCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCC LHNIRKVNTPTDSSVTQPLFSPDGQLYVVSDISNWWNIYRVTAQNTLAPVLNKKAEFAVA CCCCEECCCCCCCHHCCCCCCCCCCEEEEECCCCCEEEEEEECCCHHHHHHCCCCCEEEE DWYLGNHNYAFESEKTIIASYMLGSQAALIRLHLDSGLTESLAVDFGEITQVIRGEDAVY EEEECCCCEEECCCCEEEEEEHHCCCEEEEEEEECCCCCHHHHCCHHHHHHHHCCCCEEE FVGAKATPEKGIYKVIGRGTELVYTPNLPKLDPNYISRAKNITFKTGVNQQAYGYFYGPV EEECCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHCCCCEEECCCCCCCCEEEECCC NPNYTAPHDTRPPLIVMLHGGPTARASLAYRSDIQFWTSRGFAVLDVNFRGSSGFGRAYR CCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHCCCEEEEEEEECCCCCCCHHHH QSIYGKWGQADVEDAVNAARYLVDKGWVDGQKLAIRGVSAGGLTVMSSLAFYDVFQAGVS HHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCC YAGISDFEQLAKSTHKFETGYLDQLIGPYANNQARYRELSPLYHLEGLNEPLLIFQGLRD CCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHCCCHHHHCCCCCHHHHHHCHHH QIVPPQQSRKIYEALKVRGVPTAYIAYQDEPHGGWKPEHRAAGLETELAFYGQVFNFTPA HCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHCCCCHHHEEHHHEEECCCC GKLATLVLDNAAALKPTLVRNQ CCEEEEEECCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 3098560 [H]