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The map label for this gene is ompW [H]

Identifier: 126173728

GI number: 126173728

Start: 1732624

End: 1733271

Strand: Direct

Name: ompW [H]

Synonym: Sbal_1490

Alternate gene names: 126173728

Gene position: 1732624-1733271 (Clockwise)

Preceding gene: 126173727

Following gene: 126173730

Centisome position: 33.79

GC content: 43.83

Gene sequence:

>648_bases
ATGATGAATAAAAACACTGTTTCTAAACTGATCGCTGCCACCCTTCTAGCCGCTGGTTTTTCTGCTTCTGTATCGGCTCA
CCAAGCAGGTGACATTATCGTTCGTGCGGGTGCTATCGTTGTTGCGCCAAACGAATCAAGCGACCCAGTTGCAACTTTTG
GTGAGTTCAAAGTGAGTAACAATACTCAACTTGGTTTGAACTTCGGTTATATGTTGACTGATAACTTTGGGGTAGAGTTA
TTAGCAGCAACGCCTTTTAGCCACGATGTTTCTTTGGCTGGCGTAGGTAAAATTGCTGAAACTAAGCAACTGCCGCCAAC
TTTAGTGGCGCAGTACTATTTCGGTAATTCTCAATCAGTGGTTCGCCCTTACATTGGCGTCGGTGTGAATTACACTAACT
TTTATGATAATGAATTCACCAATGATTTAGGTGGTGCGTTAACTGACTTAAGCATGACCACGTCTTGGGGCTTAGCGGCA
CAAGCGGGTGTTGACTATCAGGTTAACAAAAACTGGTTAGTGAACGCTTCTGTGTGGTACGCGCAAATTAGCAGCGATGT
GAAGTTTAAATTATCGGGTGACACTGTGGTTATTGGTACCGATATTGACCCATGGGTTTATATGGTCAGCGTAGGTTACA
CTTTCTAA

Upstream 100 bases:

>100_bases
ATTTGGATCAATAAAGCAGTCGCGCTTCTCTGGCAGTGTAGGCGTCAATTGTTAAGGATGTAATTTAAAACAAAAACCTA
TGTTGTACATATGGAGTATG

Downstream 100 bases:

>100_bases
TCTACGGATCAGATAAGCGTAAAAAAGGAGCCTTAGGCTCCTTTTTCGTTTCTGCACTTTTTATCGCGCATGTTCCACTC
AGGTTAAGCCGACTTAGCGC

Product: outer membrane protein W

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MMNKNTVSKLIAATLLAAGFSASVSAHQAGDIIVRAGAIVVAPNESSDPVATFGEFKVSNNTQLGLNFGYMLTDNFGVEL
LAATPFSHDVSLAGVGKIAETKQLPPTLVAQYYFGNSQSVVRPYIGVGVNYTNFYDNEFTNDLGGALTDLSMTTSWGLAA
QAGVDYQVNKNWLVNASVWYAQISSDVKFKLSGDTVVIGTDIDPWVYMVSVGYTF

Sequences:

>Translated_215_residues
MMNKNTVSKLIAATLLAAGFSASVSAHQAGDIIVRAGAIVVAPNESSDPVATFGEFKVSNNTQLGLNFGYMLTDNFGVEL
LAATPFSHDVSLAGVGKIAETKQLPPTLVAQYYFGNSQSVVRPYIGVGVNYTNFYDNEFTNDLGGALTDLSMTTSWGLAA
QAGVDYQVNKNWLVNASVWYAQISSDVKFKLSGDTVVIGTDIDPWVYMVSVGYTF
>Mature_215_residues
MMNKNTVSKLIAATLLAAGFSASVSAHQAGDIIVRAGAIVVAPNESSDPVATFGEFKVSNNTQLGLNFGYMLTDNFGVEL
LAATPFSHDVSLAGVGKIAETKQLPPTLVAQYYFGNSQSVVRPYIGVGVNYTNFYDNEFTNDLGGALTDLSMTTSWGLAA
QAGVDYQVNKNWLVNASVWYAQISSDVKFKLSGDTVVIGTDIDPWVYMVSVGYTF

Specific function: Acts as a receptor for colicin S4 [H]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=217, Percent_Identity=51.1520737327189, Blast_Score=217, Evalue=4e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 22978; Mature: 22978

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNKNTVSKLIAATLLAAGFSASVSAHQAGDIIVRAGAIVVAPNESSDPVATFGEFKVSN
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCEEEEEEEECC
NTQLGLNFGYMLTDNFGVELLAATPFSHDVSLAGVGKIAETKQLPPTLVAQYYFGNSQSV
CCEEEEEEEEEEECCCCEEEEEECCCCCCEEEEECCCCHHCCCCCHHHEEEEEECCCCCE
VRPYIGVGVNYTNFYDNEFTNDLGGALTDLSMTTSWGLAAQAGVDYQVNKNWLVNASVWY
ECHHHHCCCEECEECCCCCCHHHCCCEECCEEECCCCCEECCCCCEEECCCEEEEEEEEE
AQISSDVKFKLSGDTVVIGTDIDPWVYMVSVGYTF
EEECCCEEEEECCCEEEEECCCCCEEEEEEEECCC
>Mature Secondary Structure
MMNKNTVSKLIAATLLAAGFSASVSAHQAGDIIVRAGAIVVAPNESSDPVATFGEFKVSN
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCEEEEEEEECC
NTQLGLNFGYMLTDNFGVELLAATPFSHDVSLAGVGKIAETKQLPPTLVAQYYFGNSQSV
CCEEEEEEEEEEECCCCEEEEEECCCCCCEEEEECCCCHHCCCCCHHHEEEEEECCCCCE
VRPYIGVGVNYTNFYDNEFTNDLGGALTDLSMTTSWGLAAQAGVDYQVNKNWLVNASVWY
ECHHHHCCCEECEECCCCCCHHHCCCEECCEEECCCCCEECCCCCEEECCCEEEEEEEEE
AQISSDVKFKLSGDTVVIGTDIDPWVYMVSVGYTF
EEECCCEEEEECCCEEEEECCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 9629924; 10348872 [H]