| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is kefB [H]
Identifier: 126173706
GI number: 126173706
Start: 1704176
End: 1706122
Strand: Direct
Name: kefB [H]
Synonym: Sbal_1468
Alternate gene names: 126173706
Gene position: 1704176-1706122 (Clockwise)
Preceding gene: 126173704
Following gene: 126173708
Centisome position: 33.24
GC content: 48.54
Gene sequence:
>1947_bases ATGGAACATAGCTTCTTAATCCAAGTACTACTTATGTTAGTGATTGCCATTGTGGCTATTGCTGTGCTGCGCCGTTTGGG CTTACCCGCAATTCTGGCTTATTTACTCACTGGTGTAGTGAGTGGACCGAGCGGTTTTCATTGGTTTACCCAGCATCAAA TGCAATCTGTCGCTGAACTTGGGGTGGTGCTACTGATGTTTACCTTAGGCTTAGAGTTCTCTGTGCCGCGGCTGTGGGCC ATGCGCCGTACCGTATTTGGCTTAGGCAGTGCACAGATGGTAATAACGACCCTGTTGACTATGGGCGTGGCCCTGTTGTG TGGTCTTAATTGGGTCGAAGCCTTAGTTATCGGAGCTGCCATTGCCTTATCATCCACTGCCATCGTCCTTAAATTACTCA ATGAGCAAGGATGGTTGCGTCGTCGTCATGGTGAGCTATCCGTCAGTGTCTTATTATTCCAAGATTTAGCGGTTGTGCCG CTGTTGATCCTATTGCCATTACTGGCCAATGGCGGCGAACCTTTGATGGTCGCGGATATCGCCTTTGCCTTGCTCAAAGG TATTTTGGCTTTTTTCCTCTTGATGGCTTTTGGCAAATGGGCATTGCCGCGGATTTTTGACGAAGTTGCCCGCTCCCGCT CTAACGAACTCTTCGTGTTATCAACACTAGTGGTGGCTTTAGTGACAGGCGCATTTACCCAATGGCTGGGATTATCAATG GCGCTGGGGGCATTTATGGCGGGCATGCTGCTGGGGGAAAGCCAGTACCGTCGCCAACTTGAGGCGGATATCCGGCCGTT TCGCGATCTATTGATGGGGCTGTTTTTCATTTCCATCGGCATGATGCTGGACTTTACCTTAGTGATGCGTTTCTGGTGGC AGATATTGTTGATCTTAGTGGCCGTTGTACTCGGTAAGGCGCTGATCATTCATGGGATCTTAAGATTGGTTGGCGAACCC TTTCGGATTGCGATGAGCACCGCCATGAGCCTAGCCCAAGTGGGCGAATTCAGTTTTGTGGTGTTGGCTTTAGCGGTTAA CTATCAACTTCTAGATAATGAAATCAGTACCATGTTAGTCATGGTCGCCGTGCTTTCCATGACGATAGCCCCGTGGTTAG TTCGCCATAGCGTGGATATTGCTAAGTGGGTGTTAGGAATAAGGCAGGCAAAACATGTGGATGAAGCTGTGCCACTCTTG ATGGATGAGCATGATCTGGTGATGATTTTTGGTTACGGCCGAGTAGGGCAGACCATCGCCCGTTTTTTGAAAACCGAAGC TGTACCTTATCTGGTCATGGATCTCGATCCGACTCGTGTCTCTGAGGCGCGCCGTGCTGGCGAACCTATTTATTTTGGTG ATGTGTGTAAACGGGCGATGTTAAAACAAATAGGCGTTAAGCAGGCCAAGATGATCGTCATCACTTTTTGTGAGTCGCGT AGTTTAGAAGAAGTCTTACCTTTATGTAAGTTATTGGCGCCAGGCGCTAAAATTTTAGTCAGAACTAAAGACGACAGTGA TTTAGACTTACTGAAAAAAGCCGGTGCCAATCAAGTGATCCCAGAATCTTTGGAAGGCAGCCTGATGTTAGTGTCACAGG TGTTACATCAATGTGGTGTGCCTTTGGCGCGCATTTTAAAACGCTTAGAGTCAGAGCGGCGCAGTCATTATCAATTTTTA CATGGCTTCTTTTCCGGTACAGAAACCGACTTCACCTTAGAGTCATTGCATGCGGTGGCGTTACCGCGTGGTGCAGATGC GATTGGTAAAACCGTTGCTGAGATCATGTGGGAAACATTGAGGGTGGAGTTAAGGGCGATTCGTCGCAGTGGCGCCGAAG TGGAACATCCTGAGCAGGACTGGGTTTTTCGTGCAGGGGATATCTTACTGATAGTGGGTAAACCACGAAGACTTGAGAAA GCGGAAGCTAAACTGCTGCACGGCTAA
Upstream 100 bases:
>100_bases ATTTGTTAATAAAATTTGTCTTTGTTAGTCATTCAGTTAAGCTTAAAACTCAGCGTTATTTTTTTGACACGTCAGCATTT TGACAGGAGTCATAGCCCCA
Downstream 100 bases:
>100_bases AGGTTGATGGTCAGCGTGAGTGATGGATGAAAACGCAGATATAAAAATGCCGACATAATGTCGGCATTTTTGTCTGGAAT TTGTTAACTTAAATTAGACA
Product: potassium efflux system protein
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter; NEM-activatable K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 648; Mature: 648
Protein sequence:
>648_residues MEHSFLIQVLLMLVIAIVAIAVLRRLGLPAILAYLLTGVVSGPSGFHWFTQHQMQSVAELGVVLLMFTLGLEFSVPRLWA MRRTVFGLGSAQMVITTLLTMGVALLCGLNWVEALVIGAAIALSSTAIVLKLLNEQGWLRRRHGELSVSVLLFQDLAVVP LLILLPLLANGGEPLMVADIAFALLKGILAFFLLMAFGKWALPRIFDEVARSRSNELFVLSTLVVALVTGAFTQWLGLSM ALGAFMAGMLLGESQYRRQLEADIRPFRDLLMGLFFISIGMMLDFTLVMRFWWQILLILVAVVLGKALIIHGILRLVGEP FRIAMSTAMSLAQVGEFSFVVLALAVNYQLLDNEISTMLVMVAVLSMTIAPWLVRHSVDIAKWVLGIRQAKHVDEAVPLL MDEHDLVMIFGYGRVGQTIARFLKTEAVPYLVMDLDPTRVSEARRAGEPIYFGDVCKRAMLKQIGVKQAKMIVITFCESR SLEEVLPLCKLLAPGAKILVRTKDDSDLDLLKKAGANQVIPESLEGSLMLVSQVLHQCGVPLARILKRLESERRSHYQFL HGFFSGTETDFTLESLHAVALPRGADAIGKTVAEIMWETLRVELRAIRRSGAEVEHPEQDWVFRAGDILLIVGKPRRLEK AEAKLLHG
Sequences:
>Translated_648_residues MEHSFLIQVLLMLVIAIVAIAVLRRLGLPAILAYLLTGVVSGPSGFHWFTQHQMQSVAELGVVLLMFTLGLEFSVPRLWA MRRTVFGLGSAQMVITTLLTMGVALLCGLNWVEALVIGAAIALSSTAIVLKLLNEQGWLRRRHGELSVSVLLFQDLAVVP LLILLPLLANGGEPLMVADIAFALLKGILAFFLLMAFGKWALPRIFDEVARSRSNELFVLSTLVVALVTGAFTQWLGLSM ALGAFMAGMLLGESQYRRQLEADIRPFRDLLMGLFFISIGMMLDFTLVMRFWWQILLILVAVVLGKALIIHGILRLVGEP FRIAMSTAMSLAQVGEFSFVVLALAVNYQLLDNEISTMLVMVAVLSMTIAPWLVRHSVDIAKWVLGIRQAKHVDEAVPLL MDEHDLVMIFGYGRVGQTIARFLKTEAVPYLVMDLDPTRVSEARRAGEPIYFGDVCKRAMLKQIGVKQAKMIVITFCESR SLEEVLPLCKLLAPGAKILVRTKDDSDLDLLKKAGANQVIPESLEGSLMLVSQVLHQCGVPLARILKRLESERRSHYQFL HGFFSGTETDFTLESLHAVALPRGADAIGKTVAEIMWETLRVELRAIRRSGAEVEHPEQDWVFRAGDILLIVGKPRRLEK AEAKLLHG >Mature_648_residues MEHSFLIQVLLMLVIAIVAIAVLRRLGLPAILAYLLTGVVSGPSGFHWFTQHQMQSVAELGVVLLMFTLGLEFSVPRLWA MRRTVFGLGSAQMVITTLLTMGVALLCGLNWVEALVIGAAIALSSTAIVLKLLNEQGWLRRRHGELSVSVLLFQDLAVVP LLILLPLLANGGEPLMVADIAFALLKGILAFFLLMAFGKWALPRIFDEVARSRSNELFVLSTLVVALVTGAFTQWLGLSM ALGAFMAGMLLGESQYRRQLEADIRPFRDLLMGLFFISIGMMLDFTLVMRFWWQILLILVAVVLGKALIIHGILRLVGEP FRIAMSTAMSLAQVGEFSFVVLALAVNYQLLDNEISTMLVMVAVLSMTIAPWLVRHSVDIAKWVLGIRQAKHVDEAVPLL MDEHDLVMIFGYGRVGQTIARFLKTEAVPYLVMDLDPTRVSEARRAGEPIYFGDVCKRAMLKQIGVKQAKMIVITFCESR SLEEVLPLCKLLAPGAKILVRTKDDSDLDLLKKAGANQVIPESLEGSLMLVSQVLHQCGVPLARILKRLESERRSHYQFL HGFFSGTETDFTLESLHAVALPRGADAIGKTVAEIMWETLRVELRAIRRSGAEVEHPEQDWVFRAGDILLIVGKPRRLEK AEAKLLHG
Specific function: Transport system that facilitates potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=407, Percent_Identity=25.7985257985258, Blast_Score=94, Evalue=6e-19, Organism=Escherichia coli, GI1789749, Length=545, Percent_Identity=35.7798165137615, Blast_Score=288, Evalue=9e-79, Organism=Escherichia coli, GI1786232, Length=569, Percent_Identity=32.8646748681898, Blast_Score=275, Evalue=7e-75, Organism=Escherichia coli, GI1786685, Length=523, Percent_Identity=29.8279158699809, Blast_Score=202, Evalue=5e-53, Organism=Saccharomyces cerevisiae, GI6322367, Length=409, Percent_Identity=22.7383863080685, Blast_Score=75, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR020884 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 71787; Mature: 71787
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHSFLIQVLLMLVIAIVAIAVLRRLGLPAILAYLLTGVVSGPSGFHWFTQHQMQSVAEL CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH GVVLLMFTLGLEFSVPRLWAMRRTVFGLGSAQMVITTLLTMGVALLCGLNWVEALVIGAA HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IALSSTAIVLKLLNEQGWLRRRHGELSVSVLLFQDLAVVPLLILLPLLANGGEPLMVADI HHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH AFALLKGILAFFLLMAFGKWALPRIFDEVARSRSNELFVLSTLVVALVTGAFTQWLGLSM HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHH ALGAFMAGMLLGESQYRRQLEADIRPFRDLLMGLFFISIGMMLDFTLVMRFWWQILLILV HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVVLGKALIIHGILRLVGEPFRIAMSTAMSLAQVGEFSFVVLALAVNYQLLDNEISTMLV HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH MVAVLSMTIAPWLVRHSVDIAKWVLGIRQAKHVDEAVPLLMDEHDLVMIFGYGRVGQTIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHH RFLKTEAVPYLVMDLDPTRVSEARRAGEPIYFGDVCKRAMLKQIGVKQAKMIVITFCESR HHHHHCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHEEEEEECCCC SLEEVLPLCKLLAPGAKILVRTKDDSDLDLLKKAGANQVIPESLEGSLMLVSQVLHQCGV CHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHCCC PLARILKRLESERRSHYQFLHGFFSGTETDFTLESLHAVALPRGADAIGKTVAEIMWETL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH RVELRAIRRSGAEVEHPEQDWVFRAGDILLIVGKPRRLEKAEAKLLHG HHHHHHHHHCCCCCCCCCCCCEEECCCEEEEECCCCHHHHHHHHHCCC >Mature Secondary Structure MEHSFLIQVLLMLVIAIVAIAVLRRLGLPAILAYLLTGVVSGPSGFHWFTQHQMQSVAEL CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH GVVLLMFTLGLEFSVPRLWAMRRTVFGLGSAQMVITTLLTMGVALLCGLNWVEALVIGAA HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IALSSTAIVLKLLNEQGWLRRRHGELSVSVLLFQDLAVVPLLILLPLLANGGEPLMVADI HHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH AFALLKGILAFFLLMAFGKWALPRIFDEVARSRSNELFVLSTLVVALVTGAFTQWLGLSM HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHH ALGAFMAGMLLGESQYRRQLEADIRPFRDLLMGLFFISIGMMLDFTLVMRFWWQILLILV HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVVLGKALIIHGILRLVGEPFRIAMSTAMSLAQVGEFSFVVLALAVNYQLLDNEISTMLV HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH MVAVLSMTIAPWLVRHSVDIAKWVLGIRQAKHVDEAVPLLMDEHDLVMIFGYGRVGQTIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHH RFLKTEAVPYLVMDLDPTRVSEARRAGEPIYFGDVCKRAMLKQIGVKQAKMIVITFCESR HHHHHCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHEEEEEECCCC SLEEVLPLCKLLAPGAKILVRTKDDSDLDLLKKAGANQVIPESLEGSLMLVSQVLHQCGV CHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHCCC PLARILKRLESERRSHYQFLHGFFSGTETDFTLESLHAVALPRGADAIGKTVAEIMWETL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH RVELRAIRRSGAEVEHPEQDWVFRAGDILLIVGKPRRLEKAEAKLLHG HHHHHHHHHCCCCCCCCCCCCEEECCCEEEEECCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA