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The map label for this gene is rpfG [H]

Identifier: 126173684

GI number: 126173684

Start: 1676277

End: 1678208

Strand: Direct

Name: rpfG [H]

Synonym: Sbal_1446

Alternate gene names: 126173684

Gene position: 1676277-1678208 (Clockwise)

Preceding gene: 126173683

Following gene: 126173688

Centisome position: 32.69

GC content: 47.62

Gene sequence:

>1932_bases
ATGTCAACTAGTCAAAGCCTTATCGTTGGAATGAAAGACTTGCCCGATAGTTTGAATTTGTCTTGGGCACAGCTTGATGA
GCAATTTCGCGTGCTACGGATGAGCCAAGCCTTTTACAGCCGTTGTAAACGCTCGGCGGCGCAAATCATTAATCAACCCA
TCAGCCAACTGTTTAGTGCCTTTAATGCCGAGTTGTGCGCCGATATCGTGAGGCGACGTGGGCAAGAGATAGGTTTTCAA
TTACAAGACCATAGAGGTATACGTGTGCATCTCGCGCTGCATTCCTTGCCTGAAATGGGATGGTATTTGATTCTATCCGA
CATTAATTTTGAAGATCCGCAGATGAAGGAGCTGCATTCGGATTATCGCCGAGCGATTCAAGCCAGCGATGCTTGGCTGC
AACACATTGAAGATGTGATTAAATCCTCCCAAGAAGAAGTGTTTAAAGTTGCCGTCTCCAAGGCGATGTCGCTCACAGGC
AGTCGATATGGCTTTATTCTGCTGCATAACGAAAAGTCAAAAACACTCACGCTCGCGGCACGTTCAGACTATCCTCCCGC
CGAGGCGAATCAAGCCGATTTCATCGAAGATAATACCCAAGTGTCAGAACTTGAAAGCCGCGTATGGCTCGAATGCGTGC
GAGATTATAAGCCGATTATCCAAAATCAAACCGACTCCCAAAGGCGCTTAGGGGATTTGCCCTTAGATAAACTGTTACTT
GCAGGGCGTTATTTGGCGGTGCCGATTTTGTTTCGCAGCCGCTTGGTCGGCATAGTGTGCGTGGTCGACCGTAACGAGCC
CTATAGTCGCAATGATGCAAGATCATTACTCACCTTCGCCAGCATCCTATGGCACACCATCGAACTGCCGCGCACATTAC
GGGCTGTCTCTCGCCAGTCCAAAATCATTAAATCGCAAAAAGAGCAGTTATCTCAGTCGTTAACCCAGCTTATTAGTGCC
ATTTCTGAGGCATTGGAACTAAAAGATGCCTATACCGCAGGGCATCAAAAGTCGGTAGCGCAATTAAGTTATTTGATTGG
TGAGAAATTAGGCTTAGATCCACTGCGTCTCGAAGGACTGAAAATTGGTGCCTTAGTCCATGATATCGGCAAGTTGGCCA
TTCCATCGCAGATCTTGACCAAACCTTCGAAGCTTTCGAAAGAAGAATACGCATTAATACAGACCCATCCACTCCATGGA
GCTGAAATTATTGAGGATGTGGAGTTTCCTTGGCCCATTAAAGAGATGATTTTACAGCATCATGAGCGGCTCGATGGCTC
AGGCTATCCCGCGGGTTTAAAGGATAAAGCCATTCTCTATGAGGCGAAAATTATTGCCGTAGCCGATGTTGCCGATTCGA
TATTATCCCACAGGCCCTATCGTCCATCTTTGGGGCTGGAGAAAATGACCGAAGTGCTGCGTGCGGGCAAAGGGACTCTT
TTTGATCCTGAGATAGTCGAAACCTGTTTAGAGATTTTGATTAATCGTGAGTTGAGTATTAGTGACCATATCGGCGCTGC
GCCACTTGAACCTCTAGTTACGATTTCCCTCGACCATGAGTTAGTCGACGTTAAGCGTTTGCTTACCGCCGCCCACGCTA
AGGTGGCCGTGGTATTGGATGAACAACATAAGATACTCGGCGTGATCACGAGTCGTTTGCTGGAACATTGGTTCAGCCCA
TTACTTGGCACAGCGGCTGAGCGTGAGCAGGATAGGGCATCACTGCATAAAAAAGCCCATCAGATCATGCAGCATTCGGT
GCCTATTATCAGTGAGGTGGCCACATCGGAAGATGCCTTATTGCAGTTGAATCTTTTGGACTCAGAATATCTTGTGGTGG
TGAACAAAGCGCAGCAGCCATTGGGGATTATCGGCTGGCGGGCTATTGCCATGACGAGAAATGCATTTCGTGAAGTTGAG
CGCTTGATTTAA

Upstream 100 bases:

>100_bases
GCTATCATTATGTTTATTGGAGATTTTATAGTGCTCACATTCGGGCGAATATCACGCTAAAGCGTGTCGCCCATGCTCTA
ATCAAAGACTGGAGTGCTGG

Downstream 100 bases:

>100_bases
GTGCCTTATTAAACACTTTATTTTTAAGCCTGATAATGACAGCGCAACTATAGGCTAAATTTTACTGACAATAAAAAAGA
TGCCCGCGGGCATCTTTTTT

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 643; Mature: 642

Protein sequence:

>643_residues
MSTSQSLIVGMKDLPDSLNLSWAQLDEQFRVLRMSQAFYSRCKRSAAQIINQPISQLFSAFNAELCADIVRRRGQEIGFQ
LQDHRGIRVHLALHSLPEMGWYLILSDINFEDPQMKELHSDYRRAIQASDAWLQHIEDVIKSSQEEVFKVAVSKAMSLTG
SRYGFILLHNEKSKTLTLAARSDYPPAEANQADFIEDNTQVSELESRVWLECVRDYKPIIQNQTDSQRRLGDLPLDKLLL
AGRYLAVPILFRSRLVGIVCVVDRNEPYSRNDARSLLTFASILWHTIELPRTLRAVSRQSKIIKSQKEQLSQSLTQLISA
ISEALELKDAYTAGHQKSVAQLSYLIGEKLGLDPLRLEGLKIGALVHDIGKLAIPSQILTKPSKLSKEEYALIQTHPLHG
AEIIEDVEFPWPIKEMILQHHERLDGSGYPAGLKDKAILYEAKIIAVADVADSILSHRPYRPSLGLEKMTEVLRAGKGTL
FDPEIVETCLEILINRELSISDHIGAAPLEPLVTISLDHELVDVKRLLTAAHAKVAVVLDEQHKILGVITSRLLEHWFSP
LLGTAAEREQDRASLHKKAHQIMQHSVPIISEVATSEDALLQLNLLDSEYLVVVNKAQQPLGIIGWRAIAMTRNAFREVE
RLI

Sequences:

>Translated_643_residues
MSTSQSLIVGMKDLPDSLNLSWAQLDEQFRVLRMSQAFYSRCKRSAAQIINQPISQLFSAFNAELCADIVRRRGQEIGFQ
LQDHRGIRVHLALHSLPEMGWYLILSDINFEDPQMKELHSDYRRAIQASDAWLQHIEDVIKSSQEEVFKVAVSKAMSLTG
SRYGFILLHNEKSKTLTLAARSDYPPAEANQADFIEDNTQVSELESRVWLECVRDYKPIIQNQTDSQRRLGDLPLDKLLL
AGRYLAVPILFRSRLVGIVCVVDRNEPYSRNDARSLLTFASILWHTIELPRTLRAVSRQSKIIKSQKEQLSQSLTQLISA
ISEALELKDAYTAGHQKSVAQLSYLIGEKLGLDPLRLEGLKIGALVHDIGKLAIPSQILTKPSKLSKEEYALIQTHPLHG
AEIIEDVEFPWPIKEMILQHHERLDGSGYPAGLKDKAILYEAKIIAVADVADSILSHRPYRPSLGLEKMTEVLRAGKGTL
FDPEIVETCLEILINRELSISDHIGAAPLEPLVTISLDHELVDVKRLLTAAHAKVAVVLDEQHKILGVITSRLLEHWFSP
LLGTAAEREQDRASLHKKAHQIMQHSVPIISEVATSEDALLQLNLLDSEYLVVVNKAQQPLGIIGWRAIAMTRNAFREVE
RLI
>Mature_642_residues
STSQSLIVGMKDLPDSLNLSWAQLDEQFRVLRMSQAFYSRCKRSAAQIINQPISQLFSAFNAELCADIVRRRGQEIGFQL
QDHRGIRVHLALHSLPEMGWYLILSDINFEDPQMKELHSDYRRAIQASDAWLQHIEDVIKSSQEEVFKVAVSKAMSLTGS
RYGFILLHNEKSKTLTLAARSDYPPAEANQADFIEDNTQVSELESRVWLECVRDYKPIIQNQTDSQRRLGDLPLDKLLLA
GRYLAVPILFRSRLVGIVCVVDRNEPYSRNDARSLLTFASILWHTIELPRTLRAVSRQSKIIKSQKEQLSQSLTQLISAI
SEALELKDAYTAGHQKSVAQLSYLIGEKLGLDPLRLEGLKIGALVHDIGKLAIPSQILTKPSKLSKEEYALIQTHPLHGA
EIIEDVEFPWPIKEMILQHHERLDGSGYPAGLKDKAILYEAKIIAVADVADSILSHRPYRPSLGLEKMTEVLRAGKGTLF
DPEIVETCLEILINRELSISDHIGAAPLEPLVTISLDHELVDVKRLLTAAHAKVAVVLDEQHKILGVITSRLLEHWFSPL
LGTAAEREQDRASLHKKAHQIMQHSVPIISEVATSEDALLQLNLLDSEYLVVVNKAQQPLGIIGWRAIAMTRNAFREVER
LI

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 72374; Mature: 72243

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSQSLIVGMKDLPDSLNLSWAQLDEQFRVLRMSQAFYSRCKRSAAQIINQPISQLFSA
CCCCCCCEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNAELCADIVRRRGQEIGFQLQDHRGIRVHLALHSLPEMGWYLILSDINFEDPQMKELHS
HCHHHHHHHHHHCCHHCCCEEECCCCEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHH
DYRRAIQASDAWLQHIEDVIKSSQEEVFKVAVSKAMSLTGSRYGFILLHNEKSKTLTLAA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEE
RSDYPPAEANQADFIEDNTQVSELESRVWLECVRDYKPIIQNQTDSQRRLGDLPLDKLLL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHH
AGRYLAVPILFRSRLVGIVCVVDRNEPYSRNDARSLLTFASILWHTIELPRTLRAVSRQS
HCHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIIKSQKEQLSQSLTQLISAISEALELKDAYTAGHQKSVAQLSYLIGEKLGLDPLRLEGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHCCCC
KIGALVHDIGKLAIPSQILTKPSKLSKEEYALIQTHPLHGAEIIEDVEFPWPIKEMILQH
HHHHHHHHHHHHCCCHHHHCCCHHCCHHHEEEEEECCCCHHHHHHHCCCCCCHHHHHHHH
HERLDGSGYPAGLKDKAILYEAKIIAVADVADSILSHRPYRPSLGLEKMTEVLRAGKGTL
HHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC
FDPEIVETCLEILINRELSISDHIGAAPLEPLVTISLDHELVDVKRLLTAAHAKVAVVLD
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCEEEEEEC
EQHKILGVITSRLLEHWFSPLLGTAAEREQDRASLHKKAHQIMQHSVPIISEVATSEDAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCE
LQLNLLDSEYLVVVNKAQQPLGIIGWRAIAMTRNAFREVERLI
EEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STSQSLIVGMKDLPDSLNLSWAQLDEQFRVLRMSQAFYSRCKRSAAQIINQPISQLFSA
CCCCCCEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNAELCADIVRRRGQEIGFQLQDHRGIRVHLALHSLPEMGWYLILSDINFEDPQMKELHS
HCHHHHHHHHHHCCHHCCCEEECCCCEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHH
DYRRAIQASDAWLQHIEDVIKSSQEEVFKVAVSKAMSLTGSRYGFILLHNEKSKTLTLAA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEE
RSDYPPAEANQADFIEDNTQVSELESRVWLECVRDYKPIIQNQTDSQRRLGDLPLDKLLL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHH
AGRYLAVPILFRSRLVGIVCVVDRNEPYSRNDARSLLTFASILWHTIELPRTLRAVSRQS
HCHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIIKSQKEQLSQSLTQLISAISEALELKDAYTAGHQKSVAQLSYLIGEKLGLDPLRLEGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHCCCC
KIGALVHDIGKLAIPSQILTKPSKLSKEEYALIQTHPLHGAEIIEDVEFPWPIKEMILQH
HHHHHHHHHHHHCCCHHHHCCCHHCCHHHEEEEEECCCCHHHHHHHCCCCCCHHHHHHHH
HERLDGSGYPAGLKDKAILYEAKIIAVADVADSILSHRPYRPSLGLEKMTEVLRAGKGTL
HHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC
FDPEIVETCLEILINRELSISDHIGAAPLEPLVTISLDHELVDVKRLLTAAHAKVAVVLD
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCEEEEEEC
EQHKILGVITSRLLEHWFSPLLGTAAEREQDRASLHKKAHQIMQHSVPIISEVATSEDAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCE
LQLNLLDSEYLVVVNKAQQPLGIIGWRAIAMTRNAFREVERLI
EEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]