| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yuxL [H]
Identifier: 126173607
GI number: 126173607
Start: 1569017
End: 1571851
Strand: Direct
Name: yuxL [H]
Synonym: Sbal_1369
Alternate gene names: 126173607
Gene position: 1569017-1571851 (Clockwise)
Preceding gene: 126173605
Following gene: 126173613
Centisome position: 30.6
GC content: 48.75
Gene sequence:
>2835_bases TTGAAGTTAATCCCTATCACATCTCTGGTGCTGTTATCCCTTGGAATATTGCCAGCAGTGCAGGCTGATACCAGCACTAA ACCGCTCACCCTCACAGACATCATGCACTTTGAATCCCTTGAAAAGCCGGTTATCGCAGATAAGGGCCAAGTCATCGCGG TCGAGTCTGCGCCCGATCGCGGGGATAGTCACGTCATTGTGAAAAATGTGCTGTCGCAGCAAAGTTATCAAATCGCGGGT GGGTCAGATCCTTTAGTGAGTCACGATGGCCGCTTTGTGGCTGTGGTGGTCAAACCGAGTTTGCTCACGCGTGAAACGAG TGATGCCAAGGCGAAGAAAAAACTCAAATCTGACATGGTATTACTCGATACCCAAACGGGCACTCAAACCCGCTTTGAGC GCGTGAAGGAATTCGTGTTCAGTGATGACGGTAAGCATTTGGCAATGTGGTTTGAGGCCGATGAAGAGTCTAAAAAAGAT GCTGAGCCTAAAGCCAGCGAAAAACTCGCTGAAGCAGGCACACAAACCCCAGCGAAAGCGGATAAGCCAAAGGTTGATAA GTTTGACCAAGGCCGCCGTTTTACTTTACTTAGTTTAGACGGTCAAACCCAGCGCATCGATGTTGAGCAAGTGACAGGTT ATGTGTTTGATAAGGCGAGCCGCCGACTTGCATTGGCGGTGAATGATATCGCCAATAAACAGCATCAATTGCAGTTAGTG GATTTACATACCCACCAAAAAACCGTCGCTTTTGATTCGCCTAGCCAACAGGTTGGTGCGTTAGCGCTGGCTAAAAATGG TCGTTGGCTGGCGTTTACGCAGGGCAAAGATAGCGAGTTGCCCTATGGTCGCAGCTATCAGTTATCGCTGGTCGATTTGC AATCGGGTAAAATCAGCAAAACTCCTGAGTCACCCGAGTGGAAACTCAATCGCTACACTAGTTTAAGCTTCTCATTGGAC AGCGAACGGCTGTTCTTCGGCCGCGTGCCAGAGGTGAGCCAGCAGCTTAGTTTGCAGAAAATCACCGAAGAAAAAGACCT GTTTAATGCCGATATTGTTACCGGACAGCGTGGGCTTAAGGTGTGGCATGGTGACGACCCACGGATTAAACCCCACGAAA TCAAGCAATATGAGGATGAGCAAAAACGGACTTACCTTGCGGTATTGCATTTAGGCTCAAATAACGTGGTGCAGCTTGGC GATAAAACTGTGCCAGATGTGACGATTTCACAACATAAGCGCTTTATGTTGGCGAGTTCGGATTTGCCCTATCGCAAGAT GGCGACGTGGGCGGGCTTCTATCAAGACTATTATCTGGTCGACATTAACACTGGCAGTAAGGTGCCTTTTTTGACTCAGC AGCCGAGCGATGCCGAGCCAAGTTTGTCGGGTAATGGCAAGTATGTGGCTTATTATCAGCAAGGTAATGTGTATCTTTAT GATATTGCTGAGGCCCATCGCACTAACCTGACAAGATCATTAAAGGTCAGCTTTGCCGATGAAGACCATGACTATCCATC GAGCGCGCCGGGATATGGTTTTGGCCCTTGGCTGAAAGATGACGCTGGGTTCTTGGTTTACGATAAATATGATGTCTGGC AGTTTAATACTGAATCTAAGGCAGGTTTTGCCTTAACCGCAGGTAAAGGGCGCACCCAGAAAATTCAATATCGTCTTGAG GGCTTAGTCGATAATCCCGATGAACCGACTGAGCTTGCCTATAACGCCACTGTGTTACTCCACGGTTATAGCGATAAAAC TAAGGCCGATGGCTTCTACCAAGCGACGCTCGGCGCAGCGGGCGTGAAAACGCTGATGCAAGGCGAGTATAAGTTGACTG TGTTAGGACGCAGTAAAGACGCAGACACTATCGTGTTTTCTAAGGAGCGTTTCGACTTATTCCCCGACTTGTATACCGCT AACTATAGCGCCCCGCAAAATGCAGGTAAGCAAACGGATTTAGATAAGCAACGCCAAGCGTTTAACTGGAGCAAAGCCGA GTTAGTTCACTGGACGAATGGCGATGGTAAGCCGTTAGATGGCGTGCTGATCAAGCCGACCAATTATCAAGCGGGTCAGC GTGTTCCTGTGTTGGTTTATTACTATCGTTTTATGACGGATAGGCTGCATGCCTTCCCGCAGATGAACATTAACCACAGG CCTAATTTTGCTTGGTATATCAATAATGGCTATGCGGTGTTCCTGCCTGATATTCGTTTTGAAATTGGTTACCCCGGCGC GAGTTCGGTGCAAGCGCTCACCTCAGGCGTGCAAAAGCTGATTGAGATGGGCATTGCCGATCCCGATGCTATTGGTCTGC AAGGTCATTCTTGGAGTGGTTATCAAACGGCGTTTGCCATCACTCAGACTAAGATGTTTAAGGCGGCGGTCGCGGGTGCG CCGGTATCGAACATGACCAGCGCCTACAGTGGCATTCGCCATGGTACGGGTATTGCGCGTCAGTTCCAGTATGAAACGGG ACAGAGCCGTATTGGCGCGAGTTTGTTTGCCGCGCCGCAAAAGTATATTGAAAACTCGCCAGTATTTTACGCTGACCGAA TTCAAACGCCTTTGATGATCATGTTTGGTGATAAGGACGATGCGGTGCCTTGGGAACAAGGTGTTGAAATGTACTTGGCC ATGCGCCGTGCGGGTAAAGATGTGGTGTTCTTACAATATGAGGATGAGCCGCATCACTTGAAAAAGTACCCGAATAAGCT CGATTACAGCATTCGCATGATGCAGTATTTCGACCATTATCTGAAAGGTAAACCCGCGCCAGAATGGCTCAGCAAAGGCG AAGCCTATGTCGAGTACAAGGCCGATGATGAATAA
Upstream 100 bases:
>100_bases GTGGTATAACTTGTAAAAATACTGGGTTCTCACCATGATGGAGAGCCAATGGTTAAATAAAGTCTACTTTAGTCTAACAA ATATATAAAAGAGGAAGACA
Downstream 100 bases:
>100_bases CTAACTGATTTAGCTTATTGCTATCACACTGAGTGACCTAGGTATGCTGTCACTAAGACGTTCAGTTGGTTAATTATGAA ATAAAAACGCCACCGATTAG
Product: peptidase S9 prolyl oligopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 944; Mature: 944
Protein sequence:
>944_residues MKLIPITSLVLLSLGILPAVQADTSTKPLTLTDIMHFESLEKPVIADKGQVIAVESAPDRGDSHVIVKNVLSQQSYQIAG GSDPLVSHDGRFVAVVVKPSLLTRETSDAKAKKKLKSDMVLLDTQTGTQTRFERVKEFVFSDDGKHLAMWFEADEESKKD AEPKASEKLAEAGTQTPAKADKPKVDKFDQGRRFTLLSLDGQTQRIDVEQVTGYVFDKASRRLALAVNDIANKQHQLQLV DLHTHQKTVAFDSPSQQVGALALAKNGRWLAFTQGKDSELPYGRSYQLSLVDLQSGKISKTPESPEWKLNRYTSLSFSLD SERLFFGRVPEVSQQLSLQKITEEKDLFNADIVTGQRGLKVWHGDDPRIKPHEIKQYEDEQKRTYLAVLHLGSNNVVQLG DKTVPDVTISQHKRFMLASSDLPYRKMATWAGFYQDYYLVDINTGSKVPFLTQQPSDAEPSLSGNGKYVAYYQQGNVYLY DIAEAHRTNLTRSLKVSFADEDHDYPSSAPGYGFGPWLKDDAGFLVYDKYDVWQFNTESKAGFALTAGKGRTQKIQYRLE GLVDNPDEPTELAYNATVLLHGYSDKTKADGFYQATLGAAGVKTLMQGEYKLTVLGRSKDADTIVFSKERFDLFPDLYTA NYSAPQNAGKQTDLDKQRQAFNWSKAELVHWTNGDGKPLDGVLIKPTNYQAGQRVPVLVYYYRFMTDRLHAFPQMNINHR PNFAWYINNGYAVFLPDIRFEIGYPGASSVQALTSGVQKLIEMGIADPDAIGLQGHSWSGYQTAFAITQTKMFKAAVAGA PVSNMTSAYSGIRHGTGIARQFQYETGQSRIGASLFAAPQKYIENSPVFYADRIQTPLMIMFGDKDDAVPWEQGVEMYLA MRRAGKDVVFLQYEDEPHHLKKYPNKLDYSIRMMQYFDHYLKGKPAPEWLSKGEAYVEYKADDE
Sequences:
>Translated_944_residues MKLIPITSLVLLSLGILPAVQADTSTKPLTLTDIMHFESLEKPVIADKGQVIAVESAPDRGDSHVIVKNVLSQQSYQIAG GSDPLVSHDGRFVAVVVKPSLLTRETSDAKAKKKLKSDMVLLDTQTGTQTRFERVKEFVFSDDGKHLAMWFEADEESKKD AEPKASEKLAEAGTQTPAKADKPKVDKFDQGRRFTLLSLDGQTQRIDVEQVTGYVFDKASRRLALAVNDIANKQHQLQLV DLHTHQKTVAFDSPSQQVGALALAKNGRWLAFTQGKDSELPYGRSYQLSLVDLQSGKISKTPESPEWKLNRYTSLSFSLD SERLFFGRVPEVSQQLSLQKITEEKDLFNADIVTGQRGLKVWHGDDPRIKPHEIKQYEDEQKRTYLAVLHLGSNNVVQLG DKTVPDVTISQHKRFMLASSDLPYRKMATWAGFYQDYYLVDINTGSKVPFLTQQPSDAEPSLSGNGKYVAYYQQGNVYLY DIAEAHRTNLTRSLKVSFADEDHDYPSSAPGYGFGPWLKDDAGFLVYDKYDVWQFNTESKAGFALTAGKGRTQKIQYRLE GLVDNPDEPTELAYNATVLLHGYSDKTKADGFYQATLGAAGVKTLMQGEYKLTVLGRSKDADTIVFSKERFDLFPDLYTA NYSAPQNAGKQTDLDKQRQAFNWSKAELVHWTNGDGKPLDGVLIKPTNYQAGQRVPVLVYYYRFMTDRLHAFPQMNINHR PNFAWYINNGYAVFLPDIRFEIGYPGASSVQALTSGVQKLIEMGIADPDAIGLQGHSWSGYQTAFAITQTKMFKAAVAGA PVSNMTSAYSGIRHGTGIARQFQYETGQSRIGASLFAAPQKYIENSPVFYADRIQTPLMIMFGDKDDAVPWEQGVEMYLA MRRAGKDVVFLQYEDEPHHLKKYPNKLDYSIRMMQYFDHYLKGKPAPEWLSKGEAYVEYKADDE >Mature_944_residues MKLIPITSLVLLSLGILPAVQADTSTKPLTLTDIMHFESLEKPVIADKGQVIAVESAPDRGDSHVIVKNVLSQQSYQIAG GSDPLVSHDGRFVAVVVKPSLLTRETSDAKAKKKLKSDMVLLDTQTGTQTRFERVKEFVFSDDGKHLAMWFEADEESKKD AEPKASEKLAEAGTQTPAKADKPKVDKFDQGRRFTLLSLDGQTQRIDVEQVTGYVFDKASRRLALAVNDIANKQHQLQLV DLHTHQKTVAFDSPSQQVGALALAKNGRWLAFTQGKDSELPYGRSYQLSLVDLQSGKISKTPESPEWKLNRYTSLSFSLD SERLFFGRVPEVSQQLSLQKITEEKDLFNADIVTGQRGLKVWHGDDPRIKPHEIKQYEDEQKRTYLAVLHLGSNNVVQLG DKTVPDVTISQHKRFMLASSDLPYRKMATWAGFYQDYYLVDINTGSKVPFLTQQPSDAEPSLSGNGKYVAYYQQGNVYLY DIAEAHRTNLTRSLKVSFADEDHDYPSSAPGYGFGPWLKDDAGFLVYDKYDVWQFNTESKAGFALTAGKGRTQKIQYRLE GLVDNPDEPTELAYNATVLLHGYSDKTKADGFYQATLGAAGVKTLMQGEYKLTVLGRSKDADTIVFSKERFDLFPDLYTA NYSAPQNAGKQTDLDKQRQAFNWSKAELVHWTNGDGKPLDGVLIKPTNYQAGQRVPVLVYYYRFMTDRLHAFPQMNINHR PNFAWYINNGYAVFLPDIRFEIGYPGASSVQALTSGVQKLIEMGIADPDAIGLQGHSWSGYQTAFAITQTKMFKAAVAGA PVSNMTSAYSGIRHGTGIARQFQYETGQSRIGASLFAAPQKYIENSPVFYADRIQTPLMIMFGDKDDAVPWEQGVEMYLA MRRAGKDVVFLQYEDEPHHLKKYPNKLDYSIRMMQYFDHYLKGKPAPEWLSKGEAYVEYKADDE
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR011659 - InterPro: IPR001375 [H]
Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 105954; Mature: 105954
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIPITSLVLLSLGILPAVQADTSTKPLTLTDIMHFESLEKPVIADKGQVIAVESAPDR CEECCHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCEEEEECCCCC GDSHVIVKNVLSQQSYQIAGGSDPLVSHDGRFVAVVVKPSLLTRETSDAKAKKKLKSDMV CCCEEHHHHHHCCCCEEECCCCCCCEECCCCEEEEEECCCHHCCCCCHHHHHHHHHCCEE LLDTQTGTQTRFERVKEFVFSDDGKHLAMWFEADEESKKDAEPKASEKLAEAGTQTPAKA EEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCC DKPKVDKFDQGRRFTLLSLDGQTQRIDVEQVTGYVFDKASRRLALAVNDIANKQHQLQLV CCCCCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHCCCCEEEEEEHHHCCCCEEEEEE DLHTHQKTVAFDSPSQQVGALALAKNGRWLAFTQGKDSELPYGRSYQLSLVDLQSGKISK EEECCCEEEEECCCCHHHCEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCC TPESPEWKLNRYTSLSFSLDSERLFFGRVPEVSQQLSLQKITEEKDLFNADIVTGQRGLK CCCCCCEEEEEEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCE VWHGDDPRIKPHEIKQYEDEQKRTYLAVLHLGSNNVVQLGDKTVPDVTISQHKRFMLASS EEECCCCCCCHHHHHHHHHHHCEEEEEEEEECCCCEEEECCCCCCCCCCCCCCEEEEECC DLPYRKMATWAGFYQDYYLVDINTGSKVPFLTQQPSDAEPSLSGNGKYVAYYQQGNVYLY CCCHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCEEEE DIAEAHRTNLTRSLKVSFADEDHDYPSSAPGYGFGPWLKDDAGFLVYDKYDVWQFNTESK ECCHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCC AGFALTAGKGRTQKIQYRLEGLVDNPDEPTELAYNATVLLHGYSDKTKADGFYQATLGAA CCEEEECCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEHHHHH GVKTLMQGEYKLTVLGRSKDADTIVFSKERFDLFPDLYTANYSAPQNAGKQTDLDKQRQA HHHHHHCCCEEEEEEECCCCCCEEEEECCHHCCCCCHHCCCCCCCCCCCCCCCCHHHHHH FNWSKAELVHWTNGDGKPLDGVLIKPTNYQAGQRVPVLVYYYRFMTDRLHAFPQMNINHR CCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCC PNFAWYINNGYAVFLPDIRFEIGYPGASSVQALTSGVQKLIEMGIADPDAIGLQGHSWSG CCEEEEEECCEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC YQTAFAITQTKMFKAAVAGAPVSNMTSAYSGIRHGTGIARQFQYETGQSRIGASLFAAPQ CEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHCHHHHHCCH KYIENSPVFYADRIQTPLMIMFGDKDDAVPWEQGVEMYLAMRRAGKDVVFLQYEDEPHHL HHHCCCCEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHH KKYPNKLDYSIRMMQYFDHYLKGKPAPEWLSKGEAYVEYKADDE HHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEECCCC >Mature Secondary Structure MKLIPITSLVLLSLGILPAVQADTSTKPLTLTDIMHFESLEKPVIADKGQVIAVESAPDR CEECCHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCEEEEECCCCC GDSHVIVKNVLSQQSYQIAGGSDPLVSHDGRFVAVVVKPSLLTRETSDAKAKKKLKSDMV CCCEEHHHHHHCCCCEEECCCCCCCEECCCCEEEEEECCCHHCCCCCHHHHHHHHHCCEE LLDTQTGTQTRFERVKEFVFSDDGKHLAMWFEADEESKKDAEPKASEKLAEAGTQTPAKA EEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCC DKPKVDKFDQGRRFTLLSLDGQTQRIDVEQVTGYVFDKASRRLALAVNDIANKQHQLQLV CCCCCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHCCCCEEEEEEHHHCCCCEEEEEE DLHTHQKTVAFDSPSQQVGALALAKNGRWLAFTQGKDSELPYGRSYQLSLVDLQSGKISK EEECCCEEEEECCCCHHHCEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCC TPESPEWKLNRYTSLSFSLDSERLFFGRVPEVSQQLSLQKITEEKDLFNADIVTGQRGLK CCCCCCEEEEEEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCE VWHGDDPRIKPHEIKQYEDEQKRTYLAVLHLGSNNVVQLGDKTVPDVTISQHKRFMLASS EEECCCCCCCHHHHHHHHHHHCEEEEEEEEECCCCEEEECCCCCCCCCCCCCCEEEEECC DLPYRKMATWAGFYQDYYLVDINTGSKVPFLTQQPSDAEPSLSGNGKYVAYYQQGNVYLY CCCHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCEEEE DIAEAHRTNLTRSLKVSFADEDHDYPSSAPGYGFGPWLKDDAGFLVYDKYDVWQFNTESK ECCHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCC AGFALTAGKGRTQKIQYRLEGLVDNPDEPTELAYNATVLLHGYSDKTKADGFYQATLGAA CCEEEECCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEHHHHH GVKTLMQGEYKLTVLGRSKDADTIVFSKERFDLFPDLYTANYSAPQNAGKQTDLDKQRQA HHHHHHCCCEEEEEEECCCCCCEEEEECCHHCCCCCHHCCCCCCCCCCCCCCCCHHHHHH FNWSKAELVHWTNGDGKPLDGVLIKPTNYQAGQRVPVLVYYYRFMTDRLHAFPQMNINHR CCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCC PNFAWYINNGYAVFLPDIRFEIGYPGASSVQALTSGVQKLIEMGIADPDAIGLQGHSWSG CCEEEEEECCEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC YQTAFAITQTKMFKAAVAGAPVSNMTSAYSGIRHGTGIARQFQYETGQSRIGASLFAAPQ CEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHCHHHHHCCH KYIENSPVFYADRIQTPLMIMFGDKDDAVPWEQGVEMYLAMRRAGKDVVFLQYEDEPHHL HHHCCCCEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHH KKYPNKLDYSIRMMQYFDHYLKGKPAPEWLSKGEAYVEYKADDE HHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 3098560 [H]