| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173564
Identifier: 126173564
GI number: 126173564
Start: 1511402
End: 1512619
Strand: Direct
Name: 126173564
Synonym: Sbal_1326
Alternate gene names: NA
Gene position: 1511402-1512619 (Clockwise)
Preceding gene: 126173563
Following gene: 126173565
Centisome position: 29.48
GC content: 44.99
Gene sequence:
>1218_bases ATGACCTGGTTATTATCCGCAGGGATACTGTTCACTTTTGCCGCGATTGCGTTTGTGATTTATCGCTGGGGTAACATTCG CTGTATCGGTGTGACGCCTGTGCGTACGTTTACCTTTATCGCGATTCTGTTCACCTCAGGCCTTGATGTCGGCTTGATCA TGTTTCCGCTGACCGAGTTTGCGGGTTATGCCAATGTGGCGGCGAGTCCTGAATACGGCTTTACCAATCCGCTGGCGATT GAGTTTGGCTTTTGGGCCTTCTTGATTTGGGGGTTCTACTTTTTAACCTGCTTCTATTTTTGTGTGATTGAACCTAGGGT GAAGTTCTTCGACATTCCTTTGGTCAAGTTCATCAATAATATCGTGATTATTGGTACCTGTGCCTTTACCGCCTATTTGT TATTAAGCAATTTGCCCTGGTACTTACCCGAATTAGGTGATGGCGAAACCATAGTCGGTAGCTTTTATTTAATCGTATTT ATGGTGATCGCCGCGGCGGTGTATTCCAGCACTAGCATACGTTATGTGCGTATTTTGAGCTTAGCCAGCACTTGGTTATT TTTAGGCTTGATTGCCATGATGTGGGCCAGTGCATTTTTATCGGCTGACTCGAGTGTGGGCGAGTTCTTTACGACCTTTG CCATGCTGGGCGACTACTTCGGCAATATTCAACATTTTGTGTTACCCATCAACGACTACCATGAGTTTTATCTGTTCTGG TGGTTTGCGTGGAGCATTATGATTGGTCAATTTACCTCGCGCTTTGTCGGCGGGATGAAAACCTACCAAGTGCTGCTGGC CATGATGGTGTTTCCGTCTATTCCCATCGCTATCTGGTTCACTGTGCTTTATTACTACAGCGCCAATGGGTTAGATACCT CGGGCTTCTATAATCTGGCGATGGTGATTGTAGGGGTGACCTTTGTGATTAACTCACTCGACTCACTGGTACGCCTGTAT ACCGACAATCTTAATCTGACGATTGAGCGTTTAGGCAAGCTTAAATATGTCAGCTTTAACTTAGTGTTGCTCTGCAGTCT GACATTACTCTTTCAATTAGACTTTCTTCAAATTCAATGGGTTGGTGCAATCGCACTGGGCCTGATCTTTAGCTGTTTTG GTTACATCATGATGACGCAATTGCAAACAGTTCGTGCCATTGAGCGCTCGCCAAAAGAGAACAAAATCGACTTTACTAAA ATTGAGCTAGCTAACTAA
Upstream 100 bases:
>100_bases TCAGTTTTTTATTATTAAATAAAAACATGGAGTTACATTTTATGGATTCATATCCTCATGCCTACTTATATCCAGTATCG ACTGGGACGGAGTGCATCCT
Downstream 100 bases:
>100_bases TGGAAAAATTAATAATGAAATCAAAATGTTTTTATCTTGTCGCCGGCGGATTGTTATTGATGTCGACTGCGGCGAATGCC GGATTATCGGCCACTGTGAC
Product: putative transporter, BCCT family protein
Products: NA
Alternate protein names: QuateRNAry Ammonium Permease; BCCT Family Transporter; Choline-Glycine Betaine Transporter-Like Protein
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MTWLLSAGILFTFAAIAFVIYRWGNIRCIGVTPVRTFTFIAILFTSGLDVGLIMFPLTEFAGYANVAASPEYGFTNPLAI EFGFWAFLIWGFYFLTCFYFCVIEPRVKFFDIPLVKFINNIVIIGTCAFTAYLLLSNLPWYLPELGDGETIVGSFYLIVF MVIAAAVYSSTSIRYVRILSLASTWLFLGLIAMMWASAFLSADSSVGEFFTTFAMLGDYFGNIQHFVLPINDYHEFYLFW WFAWSIMIGQFTSRFVGGMKTYQVLLAMMVFPSIPIAIWFTVLYYYSANGLDTSGFYNLAMVIVGVTFVINSLDSLVRLY TDNLNLTIERLGKLKYVSFNLVLLCSLTLLFQLDFLQIQWVGAIALGLIFSCFGYIMMTQLQTVRAIERSPKENKIDFTK IELAN
Sequences:
>Translated_405_residues MTWLLSAGILFTFAAIAFVIYRWGNIRCIGVTPVRTFTFIAILFTSGLDVGLIMFPLTEFAGYANVAASPEYGFTNPLAI EFGFWAFLIWGFYFLTCFYFCVIEPRVKFFDIPLVKFINNIVIIGTCAFTAYLLLSNLPWYLPELGDGETIVGSFYLIVF MVIAAAVYSSTSIRYVRILSLASTWLFLGLIAMMWASAFLSADSSVGEFFTTFAMLGDYFGNIQHFVLPINDYHEFYLFW WFAWSIMIGQFTSRFVGGMKTYQVLLAMMVFPSIPIAIWFTVLYYYSANGLDTSGFYNLAMVIVGVTFVINSLDSLVRLY TDNLNLTIERLGKLKYVSFNLVLLCSLTLLFQLDFLQIQWVGAIALGLIFSCFGYIMMTQLQTVRAIERSPKENKIDFTK IELAN >Mature_404_residues TWLLSAGILFTFAAIAFVIYRWGNIRCIGVTPVRTFTFIAILFTSGLDVGLIMFPLTEFAGYANVAASPEYGFTNPLAIE FGFWAFLIWGFYFLTCFYFCVIEPRVKFFDIPLVKFINNIVIIGTCAFTAYLLLSNLPWYLPELGDGETIVGSFYLIVFM VIAAAVYSSTSIRYVRILSLASTWLFLGLIAMMWASAFLSADSSVGEFFTTFAMLGDYFGNIQHFVLPINDYHEFYLFWW FAWSIMIGQFTSRFVGGMKTYQVLLAMMVFPSIPIAIWFTVLYYYSANGLDTSGFYNLAMVIVGVTFVINSLDSLVRLYT DNLNLTIERLGKLKYVSFNLVLLCSLTLLFQLDFLQIQWVGAIALGLIFSCFGYIMMTQLQTVRAIERSPKENKIDFTKI ELAN
Specific function: Unknown
COG id: COG1292
COG function: function code M; Choline-glycine betaine transporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46039; Mature: 45908
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWLLSAGILFTFAAIAFVIYRWGNIRCIGVTPVRTFTFIAILFTSGLDVGLIMFPLTEF CCEEHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHH AGYANVAASPEYGFTNPLAIEFGFWAFLIWGFYFLTCFYFCVIEPRVKFFDIPLVKFINN CCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHCC IVIIGTCAFTAYLLLSNLPWYLPELGDGETIVGSFYLIVFMVIAAAVYSSTSIRYVRILS EEEEEHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LASTWLFLGLIAMMWASAFLSADSSVGEFFTTFAMLGDYFGNIQHFVLPINDYHEFYLFW HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH WFAWSIMIGQFTSRFVGGMKTYQVLLAMMVFPSIPIAIWFTVLYYYSANGLDTSGFYNLA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHH MVIVGVTFVINSLDSLVRLYTDNLNLTIERLGKLKYVSFNLVLLCSLTLLFQLDFLQIQW HHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHH VGAIALGLIFSCFGYIMMTQLQTVRAIERSPKENKIDFTKIELAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC >Mature Secondary Structure TWLLSAGILFTFAAIAFVIYRWGNIRCIGVTPVRTFTFIAILFTSGLDVGLIMFPLTEF CEEHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHH AGYANVAASPEYGFTNPLAIEFGFWAFLIWGFYFLTCFYFCVIEPRVKFFDIPLVKFINN CCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHCC IVIIGTCAFTAYLLLSNLPWYLPELGDGETIVGSFYLIVFMVIAAAVYSSTSIRYVRILS EEEEEHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LASTWLFLGLIAMMWASAFLSADSSVGEFFTTFAMLGDYFGNIQHFVLPINDYHEFYLFW HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH WFAWSIMIGQFTSRFVGGMKTYQVLLAMMVFPSIPIAIWFTVLYYYSANGLDTSGFYNLA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHH MVIVGVTFVINSLDSLVRLYTDNLNLTIERLGKLKYVSFNLVLLCSLTLLFQLDFLQIQW HHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHH VGAIALGLIFSCFGYIMMTQLQTVRAIERSPKENKIDFTKIELAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA