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The map label for this gene is betI [H]

Identifier: 126173561

GI number: 126173561

Start: 1507270

End: 1507875

Strand: Direct

Name: betI [H]

Synonym: Sbal_1323

Alternate gene names: 126173561

Gene position: 1507270-1507875 (Clockwise)

Preceding gene: 126173556

Following gene: 126173562

Centisome position: 29.4

GC content: 48.18

Gene sequence:

>606_bases
ATGCCTAAAGCCGCAATGAAATTGATACGCAGACAGCAGCTTATCGATGCGACATTAGCATCGGTTGCCTTGCATGGATT
GCAGCACACGACCATCAACAGCATTAGTCAGTTGGCGGGGATGTCGTCGGGGATCATCAGTCATTATTTCAGTGGTAAGC
AGGGCTTGATCCAAGCGACGCTACGCCACTTGCTCGAGCAGTTAAAGCAGGCGTTGCTCAATCGAATCCAAGGACAAGTG
TTGGCGCCAACAGAGCGCTTAATGATGATAGTTGAAGCGAATTTTACCGAGTTACAGCGCTCACGAAATGTCACTCACAC
TTGGCTGAGTTTTTGGGCACAGGCTGTCCACGATCCCCAGTTAGCCCGTTTGCAGAATATCAATAGTCGCCGCTTATACA
GCAACTTACATTTTTCCTTTCGGCACGTGTTGCCCAAAGAGTTTGCCCTGATGGCTGCTGAGCAAACGGCGGCGATGATC
GATGGATTTTGGTTACGCAGCGCTTTAAGTGAAACCCCTGAGCAGGATTTTGTTCAGGCCGAAAAATTATGCAAAACCTT
TATCCACAATGTGATAAAGCAGCATGGAGTCAAAACATGTCAGTAG

Upstream 100 bases:

>100_bases
CACCTCGATTAGAGTGTCGCAGTTATTATCTGAATTCTGGATTGAACGTTCAATTAACGTCGTTCAGAGTATTGAGAGAG
TGGTTATTCCTTGAGTATTT

Downstream 100 bases:

>100_bases
AAGTACAGTACAACTTTATTGCGGGTCAGTTGCTCGCTAACGATAGCGGCGAAACCTTCGACGTCGTCAATCCTGCCACA
GGGCAATTGGCGTATCGAGT

Product: transcriptional regulator BetI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MPKAAMKLIRRQQLIDATLASVALHGLQHTTINSISQLAGMSSGIISHYFSGKQGLIQATLRHLLEQLKQALLNRIQGQV
LAPTERLMMIVEANFTELQRSRNVTHTWLSFWAQAVHDPQLARLQNINSRRLYSNLHFSFRHVLPKEFALMAAEQTAAMI
DGFWLRSALSETPEQDFVQAEKLCKTFIHNVIKQHGVKTCQ

Sequences:

>Translated_201_residues
MPKAAMKLIRRQQLIDATLASVALHGLQHTTINSISQLAGMSSGIISHYFSGKQGLIQATLRHLLEQLKQALLNRIQGQV
LAPTERLMMIVEANFTELQRSRNVTHTWLSFWAQAVHDPQLARLQNINSRRLYSNLHFSFRHVLPKEFALMAAEQTAAMI
DGFWLRSALSETPEQDFVQAEKLCKTFIHNVIKQHGVKTCQ
>Mature_200_residues
PKAAMKLIRRQQLIDATLASVALHGLQHTTINSISQLAGMSSGIISHYFSGKQGLIQATLRHLLEQLKQALLNRIQGQVL
APTERLMMIVEANFTELQRSRNVTHTWLSFWAQAVHDPQLARLQNINSRRLYSNLHFSFRHVLPKEFALMAAEQTAAMID
GFWLRSALSETPEQDFVQAEKLCKTFIHNVIKQHGVKTCQ

Specific function: Repressor involved in choline regulation of the bet genes [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786505, Length=189, Percent_Identity=48.6772486772487, Blast_Score=168, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR017757
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22823; Mature: 22692

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKAAMKLIRRQQLIDATLASVALHGLQHTTINSISQLAGMSSGIISHYFSGKQGLIQAT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHH
LRHLLEQLKQALLNRIQGQVLAPTERLMMIVEANFTELQRSRNVTHTWLSFWAQAVHDPQ
HHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHCCHH
LARLQNINSRRLYSNLHFSFRHVLPKEFALMAAEQTAAMIDGFWLRSALSETPEQDFVQA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
EKLCKTFIHNVIKQHGVKTCQ
HHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PKAAMKLIRRQQLIDATLASVALHGLQHTTINSISQLAGMSSGIISHYFSGKQGLIQAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHH
LRHLLEQLKQALLNRIQGQVLAPTERLMMIVEANFTELQRSRNVTHTWLSFWAQAVHDPQ
HHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHCCHH
LARLQNINSRRLYSNLHFSFRHVLPKEFALMAAEQTAAMIDGFWLRSALSETPEQDFVQA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
EKLCKTFIHNVIKQHGVKTCQ
HHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA