| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173536
Identifier: 126173536
GI number: 126173536
Start: 1478082
End: 1479854
Strand: Direct
Name: 126173536
Synonym: Sbal_1298
Alternate gene names: NA
Gene position: 1478082-1479854 (Clockwise)
Preceding gene: 126173535
Following gene: 126173537
Centisome position: 28.83
GC content: 49.69
Gene sequence:
>1773_bases ATGAGTTTACCCGCACCGCTAATGTTCACCGTTGGACTGATAGACCAAATCACTGGGCCGATTGCCAAAATCAGCCAAGG ATTAAGCGGTCTAGCGTCCAACTACCAAGCCGGAACCATGCAAATGGCCTCTGGCATTGGTGGCATCGCGGCCAGCGGTT ATGCCCTGCAAAATGCCCTTATGCCAGCCATTGAAATGGACCGCGCACTTGGCGAGGTTAAATCATTGGGCGTGCAAGAC GACGCCTTAAAAATGTTGGCAAACAACTCTTATGACTACGCGCTGAAATACGGCAAATCCTCAACCGATTTCGTGCGCTC AAGTTACGACATTCAGTCGGCAATTGCTGGCCTGAACGCCAGCGATTTATCCCGCTTTACCATGTCGTCTAACGTACTGG CCGCCGCGACTAAAGCCGACGCTGCTACCATTACCAGCTACATGGGCACCATGTACGGCATCTTTAAAAATGATGCTATG CAAATGGGTGAAGGGGCATGGGTAGAACGCCTAACGGGCATGACAGCGACCGCAGTACAAGCCTTTAAAACCGACGGTAA AAAAATGGCCGACGCCTTTGGTGCCTTAGGTGCCTCGGCAGGGCTTGCACCACTGCAAGAGCAAATGGCGATCATGGGCA CCTTGCAAGCCACTATGCAGGGCGCAGAATCCGCCACCAAATACAAATCATTTTTAGCGGGCGTGGGCAAAGCTCAAGGC GCGCTTAACCTGCAATTTACCGACTCACACGGCGCTATGCTGCCAATTGTCGATATTCTCAACAAGATTAAAGGCAAGTA TGGCGACGTGATCAGCGTGGCCGAAGGTGACGAACTCGCCAAAGCATTCGGCTCGCAAGAAGCTGTTTCTATGGTCAAGT TATTGTTAAACGACATTAACGGCTTAAGCGGATCAATCAACATGCTGGGAAAAGTCAACGGCATGGAACAAGCCGAGAAA ATGGCCGCTGCCATGACTGACCAAAGCGAACGCCTTGCCCAAAGCTGGTACGTGATCCGTGCTGCCATCGGTAGCGCCAT CTTACCCGTATTTAATAGCTTTGTTGGCAAGATTGCCGATGTTGGGCGTGACGTTATTTGGTTTACTGAAATGTTCCCAA ATCTCACTAAGAATCTAGGCTATACCGCCATAGCGGTACTGGGGCTTGTTGCTGCAGGTGGCCTTATTTCAATAGTGACA GGTGCTGGCACTATGGCGATGACAGCATGGAGTGCCATCACTACGGTGGCATCATTTTCAGCGCTGAAATATGCCGCAGC ATTAAAGTGGCTTCAAGGTGCTCAGCTTGGTGTAAATATGGCAATGATGGCTAACCCTATCGGTTTCGTCATTGCAGGTA TAGCCGCTGTGACATTAGCTGTAGGCGCCTTAATCTATTACTGGGATGACCTAAAGGCTGCGTTTTTAGATGTGAGCTGG TTAAGCGTTATAAAGTCTGTTTTTAGGAATGTATGGAACTTCATGAGTGACACATTCCCTATTTTTGGCTGGGTAATAGA ACAGCTATCGAGCCTTATGGGGATTGATATTAATGCCACTTTGGCCGCGACGGTTACCCCTACATACACAGGAACACCAA CACCACTGCTTGATGCCATTTCGCCTGTGCAAACCAACTTAAGCCGTGGCGGAGTTAGCCAGCAAATCGCCAATGCAAAC AACAGCAAATCGACTTCAGTCGGAACAGTTAACGTCTACCCAAGCAAAGGGGAGGATATCAACATCCCCGCTTACTTGGA GATGCACTCATGA
Upstream 100 bases:
>100_bases GGGCATGTTGGCTAATGAAACGCCAACGCGAAGACCTAGAAGCCATTGTCACTAACGCCATTTGTAAGGCGTTTAGTGGC AAATAAGGGAAGTGGATAGC
Downstream 100 bases:
>100_bases GCATCTATATCGATTTGCACATAGAACACGGCGACGTGGTGTTAGATGTGGGCTTAAACCCCAGCTACTTAACCGACCGC GCCGCCATTGCCCAAGACAT
Product: TP901 family phage tail tape measure protein
Products: NA
Alternate protein names: Phage Tail Tape Measure Protein Core Region; Tail Tape Measure Protein; Tail Length Determinator; Phage Tail Length Determinator; Tail Tape Measure Protein Bacteriophage Origin; Phage-Related Tail Protein; Phage Tail Tape Measure Core Region; Prophage; Phage-Like Protein; Phage Gene; Phage Tail Tape Measure Family Protein; Phage Tail Tape Measure Protein Family; Phage Tail Protein; Phage Tail Tape Measure Protein Core Region
Number of amino acids: Translated: 590; Mature: 589
Protein sequence:
>590_residues MSLPAPLMFTVGLIDQITGPIAKISQGLSGLASNYQAGTMQMASGIGGIAASGYALQNALMPAIEMDRALGEVKSLGVQD DALKMLANNSYDYALKYGKSSTDFVRSSYDIQSAIAGLNASDLSRFTMSSNVLAAATKADAATITSYMGTMYGIFKNDAM QMGEGAWVERLTGMTATAVQAFKTDGKKMADAFGALGASAGLAPLQEQMAIMGTLQATMQGAESATKYKSFLAGVGKAQG ALNLQFTDSHGAMLPIVDILNKIKGKYGDVISVAEGDELAKAFGSQEAVSMVKLLLNDINGLSGSINMLGKVNGMEQAEK MAAAMTDQSERLAQSWYVIRAAIGSAILPVFNSFVGKIADVGRDVIWFTEMFPNLTKNLGYTAIAVLGLVAAGGLISIVT GAGTMAMTAWSAITTVASFSALKYAAALKWLQGAQLGVNMAMMANPIGFVIAGIAAVTLAVGALIYYWDDLKAAFLDVSW LSVIKSVFRNVWNFMSDTFPIFGWVIEQLSSLMGIDINATLAATVTPTYTGTPTPLLDAISPVQTNLSRGGVSQQIANAN NSKSTSVGTVNVYPSKGEDINIPAYLEMHS
Sequences:
>Translated_590_residues MSLPAPLMFTVGLIDQITGPIAKISQGLSGLASNYQAGTMQMASGIGGIAASGYALQNALMPAIEMDRALGEVKSLGVQD DALKMLANNSYDYALKYGKSSTDFVRSSYDIQSAIAGLNASDLSRFTMSSNVLAAATKADAATITSYMGTMYGIFKNDAM QMGEGAWVERLTGMTATAVQAFKTDGKKMADAFGALGASAGLAPLQEQMAIMGTLQATMQGAESATKYKSFLAGVGKAQG ALNLQFTDSHGAMLPIVDILNKIKGKYGDVISVAEGDELAKAFGSQEAVSMVKLLLNDINGLSGSINMLGKVNGMEQAEK MAAAMTDQSERLAQSWYVIRAAIGSAILPVFNSFVGKIADVGRDVIWFTEMFPNLTKNLGYTAIAVLGLVAAGGLISIVT GAGTMAMTAWSAITTVASFSALKYAAALKWLQGAQLGVNMAMMANPIGFVIAGIAAVTLAVGALIYYWDDLKAAFLDVSW LSVIKSVFRNVWNFMSDTFPIFGWVIEQLSSLMGIDINATLAATVTPTYTGTPTPLLDAISPVQTNLSRGGVSQQIANAN NSKSTSVGTVNVYPSKGEDINIPAYLEMHS >Mature_589_residues SLPAPLMFTVGLIDQITGPIAKISQGLSGLASNYQAGTMQMASGIGGIAASGYALQNALMPAIEMDRALGEVKSLGVQDD ALKMLANNSYDYALKYGKSSTDFVRSSYDIQSAIAGLNASDLSRFTMSSNVLAAATKADAATITSYMGTMYGIFKNDAMQ MGEGAWVERLTGMTATAVQAFKTDGKKMADAFGALGASAGLAPLQEQMAIMGTLQATMQGAESATKYKSFLAGVGKAQGA LNLQFTDSHGAMLPIVDILNKIKGKYGDVISVAEGDELAKAFGSQEAVSMVKLLLNDINGLSGSINMLGKVNGMEQAEKM AAAMTDQSERLAQSWYVIRAAIGSAILPVFNSFVGKIADVGRDVIWFTEMFPNLTKNLGYTAIAVLGLVAAGGLISIVTG AGTMAMTAWSAITTVASFSALKYAAALKWLQGAQLGVNMAMMANPIGFVIAGIAAVTLAVGALIYYWDDLKAAFLDVSWL SVIKSVFRNVWNFMSDTFPIFGWVIEQLSSLMGIDINATLAATVTPTYTGTPTPLLDAISPVQTNLSRGGVSQQIANANN SKSTSVGTVNVYPSKGEDINIPAYLEMHS
Specific function: Unknown
COG id: COG5283
COG function: function code S; Phage-related tail protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61860; Mature: 61729
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00163 FUMARATE_LYASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPAPLMFTVGLIDQITGPIAKISQGLSGLASNYQAGTMQMASGIGGIAASGYALQNAL CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHCCHHHHHHH MPAIEMDRALGEVKSLGVQDDALKMLANNSYDYALKYGKSSTDFVRSSYDIQSAIAGLNA HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCH SDLSRFTMSSNVLAAATKADAATITSYMGTMYGIFKNDAMQMGEGAWVERLTGMTATAVQ HHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHH AFKTDGKKMADAFGALGASAGLAPLQEQMAIMGTLQATMQGAESATKYKSFLAGVGKAQG HHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ALNLQFTDSHGAMLPIVDILNKIKGKYGDVISVAEGDELAKAFGSQEAVSMVKLLLNDIN EEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHC GLSGSINMLGKVNGMEQAEKMAAAMTDQSERLAQSWYVIRAAIGSAILPVFNSFVGKIAD CCCCCHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGRDVIWFTEMFPNLTKNLGYTAIAVLGLVAAGGLISIVTGAGTMAMTAWSAITTVASFS CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHH ALKYAAALKWLQGAQLGVNMAMMANPIGFVIAGIAAVTLAVGALIYYWDDLKAAFLDVSW HHHHHHHHHHHCCCHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSVIKSVFRNVWNFMSDTFPIFGWVIEQLSSLMGIDINATLAATVTPTYTGTPTPLLDAI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHH SPVQTNLSRGGVSQQIANANNSKSTSVGTVNVYPSKGEDINIPAYLEMHS HHHHHHHHHCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECC >Mature Secondary Structure SLPAPLMFTVGLIDQITGPIAKISQGLSGLASNYQAGTMQMASGIGGIAASGYALQNAL CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHCCHHHHHHH MPAIEMDRALGEVKSLGVQDDALKMLANNSYDYALKYGKSSTDFVRSSYDIQSAIAGLNA HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCH SDLSRFTMSSNVLAAATKADAATITSYMGTMYGIFKNDAMQMGEGAWVERLTGMTATAVQ HHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHH AFKTDGKKMADAFGALGASAGLAPLQEQMAIMGTLQATMQGAESATKYKSFLAGVGKAQG HHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ALNLQFTDSHGAMLPIVDILNKIKGKYGDVISVAEGDELAKAFGSQEAVSMVKLLLNDIN EEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHC GLSGSINMLGKVNGMEQAEKMAAAMTDQSERLAQSWYVIRAAIGSAILPVFNSFVGKIAD CCCCCHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGRDVIWFTEMFPNLTKNLGYTAIAVLGLVAAGGLISIVTGAGTMAMTAWSAITTVASFS CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHH ALKYAAALKWLQGAQLGVNMAMMANPIGFVIAGIAAVTLAVGALIYYWDDLKAAFLDVSW HHHHHHHHHHHCCCHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSVIKSVFRNVWNFMSDTFPIFGWVIEQLSSLMGIDINATLAATVTPTYTGTPTPLLDAI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHH SPVQTNLSRGGVSQQIANANNSKSTSVGTVNVYPSKGEDINIPAYLEMHS HHHHHHHHHCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA