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The map label for this gene is hcr [H]

Identifier: 126173455

GI number: 126173455

Start: 1398381

End: 1399601

Strand: Direct

Name: hcr [H]

Synonym: Sbal_1217

Alternate gene names: 126173455

Gene position: 1398381-1399601 (Clockwise)

Preceding gene: 126173454

Following gene: 126173456

Centisome position: 27.27

GC content: 49.88

Gene sequence:

>1221_bases
ATGGTTAAACCGCAGTGTGTTGCAGGTAACAATGCTATGAATGCGATAAATTTGAGTGTGATGGCACGGGCGGAGGCATT
ATCGGCTTCGCCCCATAAACCCGAAAGTGTAAATCCATTGGTGCACGCTGGGCCAGCGCAAACCGGACCAGCGCTTAGCG
AACTGGTGTGCATTGAGCGCTGGAATGAAACCGTCGATGTGGTGAGTTTTCGTTTTCAAGCGGGCGAGCCGATGAAGTTT
GACTATAAACCCGGCCAGTTTATGACCTTTGTGCTCGAGATTAGCGGCGAGCAAGTGTGCCGCAGTTATACCTTGTCCTC
ATCGCCATCGAGACCCCATTCCTTGATGGTGACGATTAAGCGTGTGGCGGGTGGACTGGTGTCTAATTATCTTATTGACC
ACTTGCAGCCAGGCCAGCGTGTGCGAGTGCTGCCACCTATGGGTCAATTTAACTTAGTTGATATCCCCGCGACGAAATAC
TTGTTTTTGAGTGCCGGTTGCGGCATTACGCCCATGTATTCGATGTCGCGTTATCTGACTGACACTCAAATTGATGCCGA
TATTGCCTTTGTGCACAGCGCGCGTTCAGACGCTGATATTATTTTTAAATCGTCATTGGAGACGATGGCGAACCGCTTTA
ATGCGTTTAAGCTCTGTTATGCGCTGGAGTCGGCGGCAGCATCACTTTTATTCTCTCCAAAGATAAGTTTTGATATAGGG
CGATTAACAGCGCAGATGCTGCAAACCTTAGTGCCTGATGTTGCTGAGCGAACGGTGTATCTCTGCGGGCCCGAGCCTTA
TATGCAGGCGGTAAAAGCGTTATTGGCCGAACTCAACTTTGATATGAGTCGGTTGCACCATGAGAGTTTTGCCACGGCCG
AGAAAGCCGCACGTAATCAGATCATGCAAGCAAAGTCGCCTACAGAAGCAGATGAAAATTCGCAAGCAGGGGCTTTTACT
TTGCCTACTTTTAACTTAGCCATTGGCGATCGCAGCACAAGGCTAACACAAGGGCAAAGTTTACTTGAGGGAATAGAGTC
CGAAGGATTACCGATTATTGCGGCCTGTCGTTCGGGCGTGTGCGGCGCCTGTAAATGCCAAGTATTGGCGGGAGAAACGG
TATCGACGAGTGTGATGACGCTCAGCGCCGCGGAAATTGACGCGGGTTTTGTACTGGCTTGCTCTACAACGTTAACATCC
GATGTGACACTTAAACTCTAG

Upstream 100 bases:

>100_bases
CGTAAATCAGTCGGTGCTCATTGCTGAAGTCCGCTGGACATCGTGGCTTAAATCAGTAATGAGTCGTTGTTTAACTGCGG
TTTTCTTTCTTTTTTTTCAT

Downstream 100 bases:

>100_bases
CGCGCTGCTGATTAGTGACAGTTACACAGGGCTTATCAGGCTTATTCTTAAATGGATGGAAATATTTCTAATCCTTAGTT
GCGCTTATCTCAGTGAGAAC

Product: oxidoreductase FAD-binding subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MVKPQCVAGNNAMNAINLSVMARAEALSASPHKPESVNPLVHAGPAQTGPALSELVCIERWNETVDVVSFRFQAGEPMKF
DYKPGQFMTFVLEISGEQVCRSYTLSSSPSRPHSLMVTIKRVAGGLVSNYLIDHLQPGQRVRVLPPMGQFNLVDIPATKY
LFLSAGCGITPMYSMSRYLTDTQIDADIAFVHSARSDADIIFKSSLETMANRFNAFKLCYALESAAASLLFSPKISFDIG
RLTAQMLQTLVPDVAERTVYLCGPEPYMQAVKALLAELNFDMSRLHHESFATAEKAARNQIMQAKSPTEADENSQAGAFT
LPTFNLAIGDRSTRLTQGQSLLEGIESEGLPIIAACRSGVCGACKCQVLAGETVSTSVMTLSAAEIDAGFVLACSTTLTS
DVTLKL

Sequences:

>Translated_406_residues
MVKPQCVAGNNAMNAINLSVMARAEALSASPHKPESVNPLVHAGPAQTGPALSELVCIERWNETVDVVSFRFQAGEPMKF
DYKPGQFMTFVLEISGEQVCRSYTLSSSPSRPHSLMVTIKRVAGGLVSNYLIDHLQPGQRVRVLPPMGQFNLVDIPATKY
LFLSAGCGITPMYSMSRYLTDTQIDADIAFVHSARSDADIIFKSSLETMANRFNAFKLCYALESAAASLLFSPKISFDIG
RLTAQMLQTLVPDVAERTVYLCGPEPYMQAVKALLAELNFDMSRLHHESFATAEKAARNQIMQAKSPTEADENSQAGAFT
LPTFNLAIGDRSTRLTQGQSLLEGIESEGLPIIAACRSGVCGACKCQVLAGETVSTSVMTLSAAEIDAGFVLACSTTLTS
DVTLKL
>Mature_406_residues
MVKPQCVAGNNAMNAINLSVMARAEALSASPHKPESVNPLVHAGPAQTGPALSELVCIERWNETVDVVSFRFQAGEPMKF
DYKPGQFMTFVLEISGEQVCRSYTLSSSPSRPHSLMVTIKRVAGGLVSNYLIDHLQPGQRVRVLPPMGQFNLVDIPATKY
LFLSAGCGITPMYSMSRYLTDTQIDADIAFVHSARSDADIIFKSSLETMANRFNAFKLCYALESAAASLLFSPKISFDIG
RLTAQMLQTLVPDVAERTVYLCGPEPYMQAVKALLAELNFDMSRLHHESFATAEKAARNQIMQAKSPTEADENSQAGAFT
LPTFNLAIGDRSTRLTQGQSLLEGIESEGLPIIAACRSGVCGACKCQVLAGETVSTSVMTLSAAEIDAGFVLACSTTLTS
DVTLKL

Specific function: NADH oxidoreductase acting in concert with HCP [H]

COG id: COG1018

COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1787098, Length=327, Percent_Identity=33.3333333333333, Blast_Score=174, Evalue=1e-44,
Organism=Escherichia coli, GI1787658, Length=358, Percent_Identity=26.2569832402235, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1788903, Length=218, Percent_Identity=27.9816513761468, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1788104, Length=320, Percent_Identity=25, Blast_Score=71, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6323552, Length=198, Percent_Identity=26.2626262626263, Blast_Score=75, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6322699, Length=187, Percent_Identity=24.5989304812834, Blast_Score=67, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR000951
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 43798; Mature: 43798

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKPQCVAGNNAMNAINLSVMARAEALSASPHKPESVNPLVHAGPAQTGPALSELVCIER
CCCCCEECCCCCCCEEEHEEEEHHHHHCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHH
WNETVDVVSFRFQAGEPMKFDYKPGQFMTFVLEISGEQVCRSYTLSSSPSRPHSLMVTIK
CCCCEEEEEEEECCCCCEEECCCCCCEEEEEEEECCHHHHHHHCCCCCCCCCHHHHEEHH
RVAGGLVSNYLIDHLQPGQRVRVLPPMGQFNLVDIPATKYLFLSAGCGITPMYSMSRYLT
HHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHC
DTQIDADIAFVHSARSDADIIFKSSLETMANRFNAFKLCYALESAAASLLFSPKISFDIG
CCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHH
RLTAQMLQTLVPDVAERTVYLCGPEPYMQAVKALLAELNFDMSRLHHESFATAEKAARNQ
HHHHHHHHHHCCHHHHCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IMQAKSPTEADENSQAGAFTLPTFNLAIGDRSTRLTQGQSLLEGIESEGLPIIAACRSGV
HHHCCCCCCCCCCCCCCEEECCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCC
CGACKCQVLAGETVSTSVMTLSAAEIDAGFVLACSTTLTSDVTLKL
CCCEEEEEEECCCCCCEEEEEEHHHCCCCEEEEEECCCCCCEEEEC
>Mature Secondary Structure
MVKPQCVAGNNAMNAINLSVMARAEALSASPHKPESVNPLVHAGPAQTGPALSELVCIER
CCCCCEECCCCCCCEEEHEEEEHHHHHCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHH
WNETVDVVSFRFQAGEPMKFDYKPGQFMTFVLEISGEQVCRSYTLSSSPSRPHSLMVTIK
CCCCEEEEEEEECCCCCEEECCCCCCEEEEEEEECCHHHHHHHCCCCCCCCCHHHHEEHH
RVAGGLVSNYLIDHLQPGQRVRVLPPMGQFNLVDIPATKYLFLSAGCGITPMYSMSRYLT
HHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHC
DTQIDADIAFVHSARSDADIIFKSSLETMANRFNAFKLCYALESAAASLLFSPKISFDIG
CCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHH
RLTAQMLQTLVPDVAERTVYLCGPEPYMQAVKALLAELNFDMSRLHHESFATAEKAARNQ
HHHHHHHHHHCCHHHHCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IMQAKSPTEADENSQAGAFTLPTFNLAIGDRSTRLTQGQSLLEGIESEGLPIIAACRSGV
HHHCCCCCCCCCCCCCCEEECCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCC
CGACKCQVLAGETVSTSVMTLSAAEIDAGFVLACSTTLTSDVTLKL
CCCEEEEEEECCCCCCEEEEEEHHHCCCCEEEEEECCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 10651802 [H]