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The map label for this gene is nhaR [H]

Identifier: 126173429

GI number: 126173429

Start: 1374166

End: 1375080

Strand: Direct

Name: nhaR [H]

Synonym: Sbal_1191

Alternate gene names: 126173429

Gene position: 1374166-1375080 (Clockwise)

Preceding gene: 126173428

Following gene: 126173430

Centisome position: 26.8

GC content: 46.23

Gene sequence:

>915_bases
ATGAGCATGCTGCACTTGAATTACAACCACCTGTATTATTTTTGGATGATTAAGAAAAAGGGCTCGGTTGCTAAGGCGGC
CGAAGCCCTCTGTTTAACGCCGCAAACGATAACGGGGCAAATTCGTGCCCTAGAAGACAGGTTGAATGGCAGTTTATTCA
AGCGAGTAGGGCGGACACTGGAAGCAACTGAGCTAGGTGAGTTAGTATTTCGCTACGCCGATAAGATGTTTAGTCTTAGC
TATGAAATGCTCGATTTACTTAACTATCAAAAAGATGATGCCATGCTTTTCGAAGTGGGTATCGCCGATGCTTTGTCTAA
AGCCTTAGTCAGCCGTGTATTGTTATCCGTCGTCCCCAATGACAGTTCTATGCATTTAGCTTGCTATGAGGCGACCCACG
AAAGCTTGATGGCGCGTTTGCGTGAGCATAAACTGGATATGATCCTCTCCGATTGCGCCGGTGAATCACTGAAGTATCCC
GAAATCTTATCTAAAAAATTGGGCGAGTGTGGTGTGAGTTTTTTCTCCGCTGATACCTATAGCGCTGATTTCCCCGCCTG
TTTAGAGCAAGGTCAGTTATTAATCCCTGGCCGCAGAACCTCACTTGGACAGCAGTTATATCGCTGGTTTGACGAGCAAA
ATCTTAAAGTCAGTATCTTGGGTGAGTTCGACGATGCGGCCATGATGAAGGCCTTTGGTTACCTTAAACGGGGGATATTT
GTCACGCCGTCGATTTATCGCCAAGAAGTGATTTCCCATGGGATGAATTTGCTCGGTGAAACCACGGATGTGAAAGAGGA
ATACCATGTGATGTTTGCCGAACGTATGATCCAACATCCTGCGGTAAAGCGCTTGTTGGACACAGATTTTAGCGATCTCT
TTGCGGGACGCGATATGCAAGTCCAACAATGCTAA

Upstream 100 bases:

>100_bases
ACAAACTTGCTTGATTGCCAGCGTTTGCAATAAACTGATTTAAAACAATAGATTTATATTCCCTCTGCGCCTTGGGCGTA
TGAGGGACGATTCACACTGG

Downstream 100 bases:

>100_bases
TTTTGTGAGCCAATGTGAAGGGTTAATCGACACTTTAGTCACTGAACTGATAGACTAATGCCAAATCTGTGTTGGGAGAA
ATACCTTGGAATTAATGAAC

Product: transcriptional activator NhaR

Products: NA

Alternate protein names: Na(+)/H(+) antiporter regulatory protein [H]

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MSMLHLNYNHLYYFWMIKKKGSVAKAAEALCLTPQTITGQIRALEDRLNGSLFKRVGRTLEATELGELVFRYADKMFSLS
YEMLDLLNYQKDDAMLFEVGIADALSKALVSRVLLSVVPNDSSMHLACYEATHESLMARLREHKLDMILSDCAGESLKYP
EILSKKLGECGVSFFSADTYSADFPACLEQGQLLIPGRRTSLGQQLYRWFDEQNLKVSILGEFDDAAMMKAFGYLKRGIF
VTPSIYRQEVISHGMNLLGETTDVKEEYHVMFAERMIQHPAVKRLLDTDFSDLFAGRDMQVQQC

Sequences:

>Translated_304_residues
MSMLHLNYNHLYYFWMIKKKGSVAKAAEALCLTPQTITGQIRALEDRLNGSLFKRVGRTLEATELGELVFRYADKMFSLS
YEMLDLLNYQKDDAMLFEVGIADALSKALVSRVLLSVVPNDSSMHLACYEATHESLMARLREHKLDMILSDCAGESLKYP
EILSKKLGECGVSFFSADTYSADFPACLEQGQLLIPGRRTSLGQQLYRWFDEQNLKVSILGEFDDAAMMKAFGYLKRGIF
VTPSIYRQEVISHGMNLLGETTDVKEEYHVMFAERMIQHPAVKRLLDTDFSDLFAGRDMQVQQC
>Mature_303_residues
SMLHLNYNHLYYFWMIKKKGSVAKAAEALCLTPQTITGQIRALEDRLNGSLFKRVGRTLEATELGELVFRYADKMFSLSY
EMLDLLNYQKDDAMLFEVGIADALSKALVSRVLLSVVPNDSSMHLACYEATHESLMARLREHKLDMILSDCAGESLKYPE
ILSKKLGECGVSFFSADTYSADFPACLEQGQLLIPGRRTSLGQQLYRWFDEQNLKVSILGEFDDAAMMKAFGYLKRGIFV
TPSIYRQEVISHGMNLLGETTDVKEEYHVMFAERMIQHPAVKRLLDTDFSDLFAGRDMQVQQC

Specific function: Plays a role in the positive regulation of nhaA (Probable) [H]

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786202, Length=297, Percent_Identity=58.9225589225589, Blast_Score=363, Evalue=1e-102,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34569; Mature: 34438

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMLHLNYNHLYYFWMIKKKGSVAKAAEALCLTPQTITGQIRALEDRLNGSLFKRVGRTL
CCEEEEECCEEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHCCCC
EATELGELVFRYADKMFSLSYEMLDLLNYQKDDAMLFEVGIADALSKALVSRVLLSVVPN
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCC
DSSMHLACYEATHESLMARLREHKLDMILSDCAGESLKYPEILSKKLGECGVSFFSADTY
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHCCCCC
SADFPACLEQGQLLIPGRRTSLGQQLYRWFDEQNLKVSILGEFDDAAMMKAFGYLKRGIF
CCCCHHHHHCCCEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCEE
VTPSIYRQEVISHGMNLLGETTDVKEEYHVMFAERMIQHPAVKRLLDTDFSDLFAGRDMQ
ECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCC
VQQC
CCCC
>Mature Secondary Structure 
SMLHLNYNHLYYFWMIKKKGSVAKAAEALCLTPQTITGQIRALEDRLNGSLFKRVGRTL
CEEEEECCEEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHCCCC
EATELGELVFRYADKMFSLSYEMLDLLNYQKDDAMLFEVGIADALSKALVSRVLLSVVPN
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCC
DSSMHLACYEATHESLMARLREHKLDMILSDCAGESLKYPEILSKKLGECGVSFFSADTY
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHCCCCC
SADFPACLEQGQLLIPGRRTSLGQQLYRWFDEQNLKVSILGEFDDAAMMKAFGYLKRGIF
CCCCHHHHHCCCEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCEE
VTPSIYRQEVISHGMNLLGETTDVKEEYHVMFAERMIQHPAVKRLLDTDFSDLFAGRDMQ
ECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCC
VQQC
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8231807; 9457888; 10952301 [H]