| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173303
Identifier: 126173303
GI number: 126173303
Start: 1220094
End: 1221062
Strand: Direct
Name: 126173303
Synonym: Sbal_1059
Alternate gene names: NA
Gene position: 1220094-1221062 (Clockwise)
Preceding gene: 126173302
Following gene: 126173304
Centisome position: 23.8
GC content: 38.6
Gene sequence:
>969_bases ATGGCCAATTCAAGAAACAGCCAGAAAGGGATGTCATTAGTTGAGTTAATGGTCTCTATGGTCATTGGCCTATTTCTCAC TCTTGGGCTTTTTGCCATGTTTAGCATGTCCTCTTCTAATGTAATTACGACGAGCCAATTTAATCAATTACAAGAAAATG GCCGAATTGCTTTATCACTAATGGAAAGAGATATCAGCCAATTAGGTTTCATGGGGGACATAACGGGAACCGATTTTGTA CTTGGGACCAATATGACCTTGAGGGATGGTATTGCAAATGATTGCATTGGTGCAGGCGTAAATAACGGTACTTTACCTAA TGCAGAACCTGCACATTTTAGACGTCTGTGGGGATACGAAGAAGGTAAGAGTGGAGATACGTTAAGTTGCTTATCTGGTG TAAATCAGAATACTGACGTAATTCAAATCAAAAGGTTAGTAGGGCCACCGGTCACTAATCCAGATGGTGAACGTTTTTAC ATGGCAGCAACCTCGAGTGAAGCAGTGATGTTTAAAGGTGGTAATCCGCCTAATCCTGTGCTCGAAAATGCACGTTTTTG GGAGTATCAACATCATGTCTATTTTATTAAAAATGATGGTTCCGTACCTGTTTTACGTCGAAAAACGTTAACTAAAAATA ATGGCATGAACAACGAAGAGCAGTTAGTTGAAGGCATAGAGAATATACGTATTCTCTATGGTTTTGATAGTAACGGAGAT GATACGGCCGATAGTTTTATGCCAGCAGAAAATGTAACAACATTAATGTGGGATAACGAATTATTTCAACGGCTTGTTGC ATTAAGGGTTTTTTTATTGGTTCGTGCTATCGATGAAGATAAAAGTTATACCAATGAAACAACTTACACTTTAGGCGATA AAGAAATTAAGAATTTGAATGATCATTATCGCCGCAAGATTGTCTCGACGACTATGGTACTTGCTAACCCTGTACTAATT AGAAACTAG
Upstream 100 bases:
>100_bases CGGGTACAAGTTATTCAGGTAGTGAATGCGGAAAAGATATTGGTACGCGTAGACGGCTTTTTATTCTTTCGACAGTGATT ATTTAGGTTAATTAATTATT
Downstream 100 bases:
>100_bases AAGGCTGGTGACATGAAAAAGCAAAAGGGAATAGTGTTATTTTTTGCTCTGATTGTATTGTTACTTATGACTATCATCGG TGTTGCTTTAGCTGTTAATT
Product: type IV pilus assembly protein PilW
Products: NA
Alternate protein names: Type IV Pilus Assembly Protein PilW; Type IV Pilus Assembly Protein; Tfp Pilus Assembly Protein PilW-Like Protein; Pilin-Like Protein
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MANSRNSQKGMSLVELMVSMVIGLFLTLGLFAMFSMSSSNVITTSQFNQLQENGRIALSLMERDISQLGFMGDITGTDFV LGTNMTLRDGIANDCIGAGVNNGTLPNAEPAHFRRLWGYEEGKSGDTLSCLSGVNQNTDVIQIKRLVGPPVTNPDGERFY MAATSSEAVMFKGGNPPNPVLENARFWEYQHHVYFIKNDGSVPVLRRKTLTKNNGMNNEEQLVEGIENIRILYGFDSNGD DTADSFMPAENVTTLMWDNELFQRLVALRVFLLVRAIDEDKSYTNETTYTLGDKEIKNLNDHYRRKIVSTTMVLANPVLI RN
Sequences:
>Translated_322_residues MANSRNSQKGMSLVELMVSMVIGLFLTLGLFAMFSMSSSNVITTSQFNQLQENGRIALSLMERDISQLGFMGDITGTDFV LGTNMTLRDGIANDCIGAGVNNGTLPNAEPAHFRRLWGYEEGKSGDTLSCLSGVNQNTDVIQIKRLVGPPVTNPDGERFY MAATSSEAVMFKGGNPPNPVLENARFWEYQHHVYFIKNDGSVPVLRRKTLTKNNGMNNEEQLVEGIENIRILYGFDSNGD DTADSFMPAENVTTLMWDNELFQRLVALRVFLLVRAIDEDKSYTNETTYTLGDKEIKNLNDHYRRKIVSTTMVLANPVLI RN >Mature_321_residues ANSRNSQKGMSLVELMVSMVIGLFLTLGLFAMFSMSSSNVITTSQFNQLQENGRIALSLMERDISQLGFMGDITGTDFVL GTNMTLRDGIANDCIGAGVNNGTLPNAEPAHFRRLWGYEEGKSGDTLSCLSGVNQNTDVIQIKRLVGPPVTNPDGERFYM AATSSEAVMFKGGNPPNPVLENARFWEYQHHVYFIKNDGSVPVLRRKTLTKNNGMNNEEQLVEGIENIRILYGFDSNGDD TADSFMPAENVTTLMWDNELFQRLVALRVFLLVRAIDEDKSYTNETTYTLGDKEIKNLNDHYRRKIVSTTMVLANPVLIR N
Specific function: Unknown
COG id: COG4966
COG function: function code NU; Tfp pilus assembly protein PilW
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35931; Mature: 35800
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANSRNSQKGMSLVELMVSMVIGLFLTLGLFAMFSMSSSNVITTSQFNQLQENGRIALSL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCEEEHH MERDISQLGFMGDITGTDFVLGTNMTLRDGIANDCIGAGVNNGTLPNAEPAHFRRLWGYE HHHHHHHHCCCCCCCCCCEEEECCCCHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHCCCC EGKSGDTLSCLSGVNQNTDVIQIKRLVGPPVTNPDGERFYMAATSSEAVMFKGGNPPNPV CCCCCCHHHHHHCCCCCCCCEEEHHHHCCCCCCCCCCEEEEEECCCCEEEECCCCCCCHH LENARFWEYQHHVYFIKNDGSVPVLRRKTLTKNNGMNNEEQLVEGIENIRILYGFDSNGD HCCCEEEEEEEEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCEEEEEEECCCCC DTADSFMPAENVTTLMWDNELFQRLVALRVFLLVRAIDEDKSYTNETTYTLGDKEIKNLN CCHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHH DHYRRKIVSTTMVLANPVLIRN HHHHHHHHHHHHHHHCCEEECC >Mature Secondary Structure ANSRNSQKGMSLVELMVSMVIGLFLTLGLFAMFSMSSSNVITTSQFNQLQENGRIALSL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCEEEHH MERDISQLGFMGDITGTDFVLGTNMTLRDGIANDCIGAGVNNGTLPNAEPAHFRRLWGYE HHHHHHHHCCCCCCCCCCEEEECCCCHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHCCCC EGKSGDTLSCLSGVNQNTDVIQIKRLVGPPVTNPDGERFYMAATSSEAVMFKGGNPPNPV CCCCCCHHHHHHCCCCCCCCEEEHHHHCCCCCCCCCCEEEEEECCCCEEEECCCCCCCHH LENARFWEYQHHVYFIKNDGSVPVLRRKTLTKNNGMNNEEQLVEGIENIRILYGFDSNGD HCCCEEEEEEEEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCEEEEEEECCCCC DTADSFMPAENVTTLMWDNELFQRLVALRVFLLVRAIDEDKSYTNETTYTLGDKEIKNLN CCHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHH DHYRRKIVSTTMVLANPVLIRN HHHHHHHHHHHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA