| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173284
Identifier: 126173284
GI number: 126173284
Start: 1197882
End: 1198598
Strand: Direct
Name: 126173284
Synonym: Sbal_1040
Alternate gene names: NA
Gene position: 1197882-1198598 (Clockwise)
Preceding gene: 126173283
Following gene: 126173285
Centisome position: 23.36
GC content: 47.56
Gene sequence:
>717_bases ATGAGTAATTCATCTTCAAATGCCGATGAGATTGCGCTGCAACAACAGGTATTAGCTTGGTATCGCCAACAGGCTTTAGA GGTTCCACCACAGCAACTCGATCAAGATATCTTGCAGCTGGCGCAAACTCACATAGCTGAAATGCATCAAAGTAAAATAA CTGCTGTTGAGTCTCCAACTTCCGTCTGGCGAAGCCATCCTTGGGCGTTATCGAGCGCGGCATCTTTGGTGCTTGTTGTG GGTTTACTTGTACTGAATCGGCCGCAAATCGAAGATGTTATGACTCCAAGTCCAATGGTAATGAGTGCTCCGGCGCCACA AGCCATGACGAGAATAGCAGATACGCAAGCGCTGCAATCCTCAAATATGCAAGCAGAAGCCGTGGCTAAACATGAAATAC AAACTCAAATGCAGCAAGCGAAGGCCGCAGCGGGTGCGCTTGAGCGACAACATGATGCAAGCAGCCCAGCTATCGCTGCA AGGTCGATGAATGAACCTGAGTCTTCAGACATAGATAAAGTGCCACTCGCAGAGTCTTTGCATCAGTTACATGCCTTCAT CGAAGCGAAGGAGACTGAGCAAGCATTGGTGCTTGAGCAACAACTGCTTAAGGATTATCCACTACTCGCCGTTGAGGCTG CAGATAAAGCGCTGCTAAGCGAACAACAGCTGGAATTTAAAAAGTTACAACAGCAGCTACATCAGCTTGCTAAATAA
Upstream 100 bases:
>100_bases GACATTGCGGGCGTGACTTTAGAAGCGACTAAGAGCCGTATTCGCTACGCTTACCAAAGTCTAAAGGATTGTGTCAGCGC GAAATGGCAGGAGGCGAGTC
Downstream 100 bases:
>100_bases GTGTGTTGTTGTGGTTTTAGTAATATAAAGCGTGATGATCAATCATAACGTGGTGAGAAAAACTGCTAAATGCCCCTGAG ATTTGGATAGACGTGTTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MSNSSSNADEIALQQQVLAWYRQQALEVPPQQLDQDILQLAQTHIAEMHQSKITAVESPTSVWRSHPWALSSAASLVLVV GLLVLNRPQIEDVMTPSPMVMSAPAPQAMTRIADTQALQSSNMQAEAVAKHEIQTQMQQAKAAAGALERQHDASSPAIAA RSMNEPESSDIDKVPLAESLHQLHAFIEAKETEQALVLEQQLLKDYPLLAVEAADKALLSEQQLEFKKLQQQLHQLAK
Sequences:
>Translated_238_residues MSNSSSNADEIALQQQVLAWYRQQALEVPPQQLDQDILQLAQTHIAEMHQSKITAVESPTSVWRSHPWALSSAASLVLVV GLLVLNRPQIEDVMTPSPMVMSAPAPQAMTRIADTQALQSSNMQAEAVAKHEIQTQMQQAKAAAGALERQHDASSPAIAA RSMNEPESSDIDKVPLAESLHQLHAFIEAKETEQALVLEQQLLKDYPLLAVEAADKALLSEQQLEFKKLQQQLHQLAK >Mature_237_residues SNSSSNADEIALQQQVLAWYRQQALEVPPQQLDQDILQLAQTHIAEMHQSKITAVESPTSVWRSHPWALSSAASLVLVVG LLVLNRPQIEDVMTPSPMVMSAPAPQAMTRIADTQALQSSNMQAEAVAKHEIQTQMQQAKAAAGALERQHDASSPAIAAR SMNEPESSDIDKVPLAESLHQLHAFIEAKETEQALVLEQQLLKDYPLLAVEAADKALLSEQQLEFKKLQQQLHQLAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26173; Mature: 26042
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSSSNADEIALQQQVLAWYRQQALEVPPQQLDQDILQLAQTHIAEMHQSKITAVESPT CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH SVWRSHPWALSSAASLVLVVGLLVLNRPQIEDVMTPSPMVMSAPAPQAMTRIADTQALQS HHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEECCCHHHHHHHHHHHHHHH SNMQAEAVAKHEIQTQMQQAKAAAGALERQHDASSPAIAARSMNEPESSDIDKVPLAESL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCHHHHH HQLHAFIEAKETEQALVLEQQLLKDYPLLAVEAADKALLSEQQLEFKKLQQQLHQLAK HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNSSSNADEIALQQQVLAWYRQQALEVPPQQLDQDILQLAQTHIAEMHQSKITAVESPT CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH SVWRSHPWALSSAASLVLVVGLLVLNRPQIEDVMTPSPMVMSAPAPQAMTRIADTQALQS HHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEECCCHHHHHHHHHHHHHHH SNMQAEAVAKHEIQTQMQQAKAAAGALERQHDASSPAIAARSMNEPESSDIDKVPLAESL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCHHHHH HQLHAFIEAKETEQALVLEQQLLKDYPLLAVEAADKALLSEQQLEFKKLQQQLHQLAK HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA