| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is pqqL [C]
Identifier: 126173274
GI number: 126173274
Start: 1183968
End: 1186820
Strand: Direct
Name: pqqL [C]
Synonym: Sbal_1030
Alternate gene names: 126173274
Gene position: 1183968-1186820 (Clockwise)
Preceding gene: 126173273
Following gene: 126173275
Centisome position: 23.09
GC content: 47.53
Gene sequence:
>2853_bases ATGTATGAGGGGAATGTTTTGAAGAAATGGATATTAGCGGTCGCAATTTCTGCCGCACTCGCGGGCTGTGCATCTGAAAC GACTACGGCGAACTTGCCCGCAGGCGTTAAACTTATTGAAAATGTGCAACTGGCCGATTCGCAAGTAGGGATCCCCTACA AAAAGTACCAATTAGCCAATGGGTTAACGGTTATTTTGCATCAAGATGATTCCGATCCCTTAGTGCATGTCGACGTCACT TATCATGTGGGCTCTGCCCGTGAATTGGCTGGCCGTTCGGGTTTTGCGCATTTATTTGAACACATGATGTTCCAAGGCTC GCAGCACGTCGCCGATGAACAACATTTTGAAGTGGTTACCGAAGCTGGCGGCACCTTAAACGGCACGACCAATACCGACA GAACCAACTACTTTGAAACCGTGCCCAGCAATCAATTAGAAAAAATGCTGTGGCTTGAGTCGGACCGTATGGGCTTTTTA TTGCCGGCACTCACCAGTGAAAAATTTGAAGTGCAGCGCGAGACTGTTAAAAACGAGCGTGCGCAACGTATAGACAATCA GCCCTATGGCCGCATGAGTGAGCGTTTTGGCCAAGCCATGTATCCTGTCGGTCATCCTTATTCTTGGCCTGTGATTGGCT GGCCGGACGATCTTAATCGCGCCACAGTTGATGATGTTAAACACTTTTTCCAACGTTGGTATGGGCCTAACAATGCAACC CTGACCATAGGTGGCGATTTTGATGAAATGCAGACCTTAGCCTGGGTAAACAAATATTTTGGTGAAATCCCCCGCGGCCC TGAAGTCTCTTTAGAGCAAAAGGCGCTGGTTAACTTAGACAAAACGCGTTACATCTCCATGGAAGATCAAGTGCACTTGC CCTTGATCCGTATTGGTTTCCCAACCGTATACGCAAGGCATCCTGATGAAGCTGCGCTCGATCTGTTAGCCAATATTTTA GGCGGCGGCAAAACATCCTTGTTATATAAAAACTTGGTGAAGGATGGTTATGCCGTGCAGGCAAATGTCAGCCACCCTTG CCAAGAGCTTGCGTGTCAGATGTCGATTTATGCTTTAGCTAATCCAGAAAAGGGTGGCAAACTGGCGGATCTGGAGCAAC GCATCCTCGACTCGATTAATGAGTTTGAGCAACGTGGCGTTACCGATGACGATCTGCAAAAAGTTAAAGTGCAGTTTGAG GCCGATACCATTTACAGCCTGCAAAGTGTTTCTGGCAAAGTGTCTGCCTTAGCGATGAACCAAACGCTGTCGGGCAATCC GAACATGATAGCTTCGGATTTGAGTCGTTATGCCAATGTGACCAAAGACGATGTGATGCGCGTGTTCAAGCAATACATTA AAAATAAGCCTATGGTGGTGATGAGTGTGGTGCCGCAGGGTATGACGTCACTTATCGCCCATGCCGATAACTTCACGCCC GCGACCTTGCCCATTGCGCAAACGGCGGTTGAAGGGGATTTGCCAAAGCCTGAACTTGTTTCAAGTTTTGATCGGACTAA GATGCCCGCATCTGGCGCCGCACCTGTGTTAAAGGTTCCGACAATATGGACAAAAACCTTAGCCAATGGCATAGAAGTCA TGGGGACACAAAGCACTGAAACGCCAACGGTTGAGCTGATTGTGTACCTTAATGGCGGCCATAGACTGGTACCAGTTGAA AAAGCGGGCTTAGCGACGCTGACCGCAGAAATGCTTAACGAGTCGAGCCAGAAACGCAGCAGTGAAGCGCTTTCGCAAGC GTTAGAAATGCTCGGCAGTTCAGTCGACTTTAGTGCCTCTGAATATCAAAGTGCGATTAAAATATCGACGCTGACAGCGC ATTTAGATGAGACGCTGGCGATTATGGAAGAAAAGCTCTTCCAGCCAGCCTTTAACGAAGCGGACTTTACCCGAGTAAAA CAGCAGCAGTTACAGCAGATCCAGCATATGCAGTCCGATCCTAGTTACCTTGCTGATACGGCGTTGTCGTCTTTGTTATA CGGTAAAGACAATGCTTTAGGCGTGAATGACATAGGTACGCTCGATTCAGTCGCGGCGCTTACGTTAGCCGATGTAAAAG CGTTTTATGCCCAGCAGTATCAAGGCGGTAACGCTAAAATCGTCACAGTCGCCAATTTACCTGAATCAGCATTATTGCCT AAGTTAGCGGGACTGAGTCAGTGGCAAGGGGCCGCAGTTGTGGTGCCGCCACTTAAGCCATTCCCAGCATTAAAAGGCGG TACGATTTATCTGATTGATAAACCTGGCGCAGCGCAATCGGTGATCAATATCGCCAAGCGCGCATTGCCCTATGATGCCA CAGGCGATTACTTTAAATCTTACCTGATGAATTATCCGCTCGGCGGCGCATTCAATAGTCGTATCAACCTGAATTTACGT GAAAATAAAGGTTATACCTATGGCGCTCGCACCAGTTTTGCGGGCGGTGCTGAAGTCGGTGATTTTGTCGCATCAAGTAA CGTTCGCAGTGACGTGACGGCTAAAGCACTCACTGAGTTTGTAAAAGAAATCAGTGCGTACCAGCATAAGGGTATGACGG ATACTGAACTTGCCTTTATGCGAAATTCAGTCTCGCAAGGCCAAGCACTTGATTATGAAACGCCGTATCAAAAAGCGGGC TTTATGCGCATGATCCAACGTTACCAATTGAGCCAAGATTTTACGACTCAACAGGACAAGATCATTAATACTGTAACAAA AGATGAACTCAATGCCCTCGCGGCTTCCGAGCTAGATATCAATAAAATGGTGATTCTAGTGGTGGGAGATAAAGCGAAAA TCGAAGCAGATTTAGCGGCATTAGGCTATCCAATTGAAACTTTAGTATTGTAA
Upstream 100 bases:
>100_bases GGACTATAACTAAGCGTACTATGACTAAGCGCATTGTGACGCTACACAGCGATGAATATACGCAGCACTATGATTATGAA GCTGTATTTTTGACCCATTG
Downstream 100 bases:
>100_bases ATTGGTATTTCGCCCTTATATAGGTGATAGACGTGTACGTTAATTAACGACAATTCGTCACATATTTACCGGATTTACAT CGAAAGACGGTGACAGCATT
Product: peptidase M16 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 950; Mature: 950
Protein sequence:
>950_residues MYEGNVLKKWILAVAISAALAGCASETTTANLPAGVKLIENVQLADSQVGIPYKKYQLANGLTVILHQDDSDPLVHVDVT YHVGSARELAGRSGFAHLFEHMMFQGSQHVADEQHFEVVTEAGGTLNGTTNTDRTNYFETVPSNQLEKMLWLESDRMGFL LPALTSEKFEVQRETVKNERAQRIDNQPYGRMSERFGQAMYPVGHPYSWPVIGWPDDLNRATVDDVKHFFQRWYGPNNAT LTIGGDFDEMQTLAWVNKYFGEIPRGPEVSLEQKALVNLDKTRYISMEDQVHLPLIRIGFPTVYARHPDEAALDLLANIL GGGKTSLLYKNLVKDGYAVQANVSHPCQELACQMSIYALANPEKGGKLADLEQRILDSINEFEQRGVTDDDLQKVKVQFE ADTIYSLQSVSGKVSALAMNQTLSGNPNMIASDLSRYANVTKDDVMRVFKQYIKNKPMVVMSVVPQGMTSLIAHADNFTP ATLPIAQTAVEGDLPKPELVSSFDRTKMPASGAAPVLKVPTIWTKTLANGIEVMGTQSTETPTVELIVYLNGGHRLVPVE KAGLATLTAEMLNESSQKRSSEALSQALEMLGSSVDFSASEYQSAIKISTLTAHLDETLAIMEEKLFQPAFNEADFTRVK QQQLQQIQHMQSDPSYLADTALSSLLYGKDNALGVNDIGTLDSVAALTLADVKAFYAQQYQGGNAKIVTVANLPESALLP KLAGLSQWQGAAVVVPPLKPFPALKGGTIYLIDKPGAAQSVINIAKRALPYDATGDYFKSYLMNYPLGGAFNSRINLNLR ENKGYTYGARTSFAGGAEVGDFVASSNVRSDVTAKALTEFVKEISAYQHKGMTDTELAFMRNSVSQGQALDYETPYQKAG FMRMIQRYQLSQDFTTQQDKIINTVTKDELNALAASELDINKMVILVVGDKAKIEADLAALGYPIETLVL
Sequences:
>Translated_950_residues MYEGNVLKKWILAVAISAALAGCASETTTANLPAGVKLIENVQLADSQVGIPYKKYQLANGLTVILHQDDSDPLVHVDVT YHVGSARELAGRSGFAHLFEHMMFQGSQHVADEQHFEVVTEAGGTLNGTTNTDRTNYFETVPSNQLEKMLWLESDRMGFL LPALTSEKFEVQRETVKNERAQRIDNQPYGRMSERFGQAMYPVGHPYSWPVIGWPDDLNRATVDDVKHFFQRWYGPNNAT LTIGGDFDEMQTLAWVNKYFGEIPRGPEVSLEQKALVNLDKTRYISMEDQVHLPLIRIGFPTVYARHPDEAALDLLANIL GGGKTSLLYKNLVKDGYAVQANVSHPCQELACQMSIYALANPEKGGKLADLEQRILDSINEFEQRGVTDDDLQKVKVQFE ADTIYSLQSVSGKVSALAMNQTLSGNPNMIASDLSRYANVTKDDVMRVFKQYIKNKPMVVMSVVPQGMTSLIAHADNFTP ATLPIAQTAVEGDLPKPELVSSFDRTKMPASGAAPVLKVPTIWTKTLANGIEVMGTQSTETPTVELIVYLNGGHRLVPVE KAGLATLTAEMLNESSQKRSSEALSQALEMLGSSVDFSASEYQSAIKISTLTAHLDETLAIMEEKLFQPAFNEADFTRVK QQQLQQIQHMQSDPSYLADTALSSLLYGKDNALGVNDIGTLDSVAALTLADVKAFYAQQYQGGNAKIVTVANLPESALLP KLAGLSQWQGAAVVVPPLKPFPALKGGTIYLIDKPGAAQSVINIAKRALPYDATGDYFKSYLMNYPLGGAFNSRINLNLR ENKGYTYGARTSFAGGAEVGDFVASSNVRSDVTAKALTEFVKEISAYQHKGMTDTELAFMRNSVSQGQALDYETPYQKAG FMRMIQRYQLSQDFTTQQDKIINTVTKDELNALAASELDINKMVILVVGDKAKIEADLAALGYPIETLVL >Mature_950_residues MYEGNVLKKWILAVAISAALAGCASETTTANLPAGVKLIENVQLADSQVGIPYKKYQLANGLTVILHQDDSDPLVHVDVT YHVGSARELAGRSGFAHLFEHMMFQGSQHVADEQHFEVVTEAGGTLNGTTNTDRTNYFETVPSNQLEKMLWLESDRMGFL LPALTSEKFEVQRETVKNERAQRIDNQPYGRMSERFGQAMYPVGHPYSWPVIGWPDDLNRATVDDVKHFFQRWYGPNNAT LTIGGDFDEMQTLAWVNKYFGEIPRGPEVSLEQKALVNLDKTRYISMEDQVHLPLIRIGFPTVYARHPDEAALDLLANIL GGGKTSLLYKNLVKDGYAVQANVSHPCQELACQMSIYALANPEKGGKLADLEQRILDSINEFEQRGVTDDDLQKVKVQFE ADTIYSLQSVSGKVSALAMNQTLSGNPNMIASDLSRYANVTKDDVMRVFKQYIKNKPMVVMSVVPQGMTSLIAHADNFTP ATLPIAQTAVEGDLPKPELVSSFDRTKMPASGAAPVLKVPTIWTKTLANGIEVMGTQSTETPTVELIVYLNGGHRLVPVE KAGLATLTAEMLNESSQKRSSEALSQALEMLGSSVDFSASEYQSAIKISTLTAHLDETLAIMEEKLFQPAFNEADFTRVK QQQLQQIQHMQSDPSYLADTALSSLLYGKDNALGVNDIGTLDSVAALTLADVKAFYAQQYQGGNAKIVTVANLPESALLP KLAGLSQWQGAAVVVPPLKPFPALKGGTIYLIDKPGAAQSVINIAKRALPYDATGDYFKSYLMNYPLGGAFNSRINLNLR ENKGYTYGARTSFAGGAEVGDFVASSNVRSDVTAKALTEFVKEISAYQHKGMTDTELAFMRNSVSQGQALDYETPYQKAG FMRMIQRYQLSQDFTTQQDKIINTVTKDELNALAASELDINKMVILVVGDKAKIEADLAALGYPIETLVL
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Escherichia coli, GI1787770, Length=217, Percent_Identity=28.110599078341, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI72001443, Length=267, Percent_Identity=26.2172284644195, Blast_Score=69, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115533970, Length=322, Percent_Identity=24.223602484472, Blast_Score=66, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 104223; Mature: 104223
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYEGNVLKKWILAVAISAALAGCASETTTANLPAGVKLIENVQLADSQVGIPYKKYQLAN CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHEECCC GLTVILHQDDSDPLVHVDVTYHVGSARELAGRSGFAHLFEHMMFQGSQHVADEQHFEVVT CEEEEEEECCCCCEEEEEEEEECCCHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH EAGGTLNGTTNTDRTNYFETVPSNQLEKMLWLESDRMGFLLPALTSEKFEVQRETVKNER HCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEHHHCCHHHHHHHHHHHHHH AQRIDNQPYGRMSERFGQAMYPVGHPYSWPVIGWPDDLNRATVDDVKHFFQRWYGPNNAT HHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCE LTIGGDFDEMQTLAWVNKYFGEIPRGPEVSLEQKALVNLDKTRYISMEDQVHLPLIRIGF EEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCEEEECC PTVYARHPDEAALDLLANILGGGKTSLLYKNLVKDGYAVQANVSHPCQELACQMSIYALA CEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHEEEEE NPEKGGKLADLEQRILDSINEFEQRGVTDDDLQKVKVQFEADTIYSLQSVSGKVSALAMN CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEECCHHHHHHHCCCCEEEEEEC QTLSGNPNMIASDLSRYANVTKDDVMRVFKQYIKNKPMVVMSVVPQGMTSLIAHADNFTP CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCC ATLPIAQTAVEGDLPKPELVSSFDRTKMPASGAAPVLKVPTIWTKTLANGIEVMGTQSTE CCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHCCCEEEECCCCC TPTVELIVYLNGGHRLVPVEKAGLATLTAEMLNESSQKRSSEALSQALEMLGSSVDFSAS CCEEEEEEEECCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHH EYQSAIKISTLTAHLDETLAIMEEKLFQPAFNEADFTRVKQQQLQQIQHMQSDPSYLADT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH ALSSLLYGKDNALGVNDIGTLDSVAALTLADVKAFYAQQYQGGNAKIVTVANLPESALLP HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHH KLAGLSQWQGAAVVVPPLKPFPALKGGTIYLIDKPGAAQSVINIAKRALPYDATGDYFKS HHHCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHH YLMNYPLGGAFNSRINLNLRENKGYTYGARTSFAGGAEVGDFVASSNVRSDVTAKALTEF HHHHCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHH VKEISAYQHKGMTDTELAFMRNSVSQGQALDYETPYQKAGFMRMIQRYQLSQDFTTQQDK HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH IINTVTKDELNALAASELDINKMVILVVGDKAKIEADLAALGYPIETLVL HHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHCC >Mature Secondary Structure MYEGNVLKKWILAVAISAALAGCASETTTANLPAGVKLIENVQLADSQVGIPYKKYQLAN CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHEECCC GLTVILHQDDSDPLVHVDVTYHVGSARELAGRSGFAHLFEHMMFQGSQHVADEQHFEVVT CEEEEEEECCCCCEEEEEEEEECCCHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH EAGGTLNGTTNTDRTNYFETVPSNQLEKMLWLESDRMGFLLPALTSEKFEVQRETVKNER HCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEHHHCCHHHHHHHHHHHHHH AQRIDNQPYGRMSERFGQAMYPVGHPYSWPVIGWPDDLNRATVDDVKHFFQRWYGPNNAT HHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCE LTIGGDFDEMQTLAWVNKYFGEIPRGPEVSLEQKALVNLDKTRYISMEDQVHLPLIRIGF EEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCEEEECC PTVYARHPDEAALDLLANILGGGKTSLLYKNLVKDGYAVQANVSHPCQELACQMSIYALA CEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHEEEEE NPEKGGKLADLEQRILDSINEFEQRGVTDDDLQKVKVQFEADTIYSLQSVSGKVSALAMN CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEECCHHHHHHHCCCCEEEEEEC QTLSGNPNMIASDLSRYANVTKDDVMRVFKQYIKNKPMVVMSVVPQGMTSLIAHADNFTP CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCC ATLPIAQTAVEGDLPKPELVSSFDRTKMPASGAAPVLKVPTIWTKTLANGIEVMGTQSTE CCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHCCCEEEECCCCC TPTVELIVYLNGGHRLVPVEKAGLATLTAEMLNESSQKRSSEALSQALEMLGSSVDFSAS CCEEEEEEEECCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHH EYQSAIKISTLTAHLDETLAIMEEKLFQPAFNEADFTRVKQQQLQQIQHMQSDPSYLADT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH ALSSLLYGKDNALGVNDIGTLDSVAALTLADVKAFYAQQYQGGNAKIVTVANLPESALLP HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHH KLAGLSQWQGAAVVVPPLKPFPALKGGTIYLIDKPGAAQSVINIAKRALPYDATGDYFKS HHHCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHH YLMNYPLGGAFNSRINLNLRENKGYTYGARTSFAGGAEVGDFVASSNVRSDVTAKALTEF HHHHCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHH VKEISAYQHKGMTDTELAFMRNSVSQGQALDYETPYQKAGFMRMIQRYQLSQDFTTQQDK HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH IINTVTKDELNALAASELDINKMVILVVGDKAKIEADLAALGYPIETLVL HHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]