| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is 126173187
Identifier: 126173187
GI number: 126173187
Start: 1083656
End: 1084438
Strand: Direct
Name: 126173187
Synonym: Sbal_0943
Alternate gene names: NA
Gene position: 1083656-1084438 (Clockwise)
Preceding gene: 126173186
Following gene: 126173188
Centisome position: 21.13
GC content: 40.49
Gene sequence:
>783_bases ATGTATAGTTTACTTCGCATTAAAATGATCTGTGCGATGTGGTTTTGTATGTTTCCTGAACTCAGTTTTCGTGATGTAAA TCGTGAAGAGCAGGATTATTGCTCTTTATTTGCCCACGCGTTAATCGCCTCCTCTGAGGTGAGGGATTTCTTCTTTAATA AATGTGGCATTGAGCTTAAAGGAAAAGAAGTTGAAGTGTGTGTTGAACCTGCGCCACTCAGGGATTATTGGTACGCACTG GGCGATCCTAAGAAACATTCCAAAGCGACAGAAATGGCGAGGAAACAAGTATTAAGTCAATTTATTGAATATTATCAAGT AGGCCTTGATATCGACGAAACGGATTTTTTTTGGACCGTAAATACAAAAAGTAGCAATGGGAAAGGTAAGTTAAGAAGCC CTGGAATATGGGAATCTGAAAACATACGTCAGGCCGAACTCGAACGGCTTTTTATTCTAAAATACGCATTTAATTCTAAG CTAGACATTATGTTGTTAACTGAGTCTCACGTCATTTTCATTGAGGCTAAACTTGAGTCCGCTGAGAGTTCGTATGGAGT TAGTCGACTCACGCAGACTGAGATTCAGAACGAGATAGGCAAGTTGATTACTGAGTTTATACCAGCATTTAAACCTTTAA AGTATCTAAGGTTTACTTTGGGATTTAAGGCTAAACCGGATATCAGCTGGCACGAAGTTCATCAGTGGGTGGGAGCATCC CCTCTTGACCAACATACAAAGCGCTCCTTTCATGCGCTATGTAACCGATATCCGATGAAGTAG
Upstream 100 bases:
>100_bases CCGCTAGACAATATCTTTGATTAATATCATTAATTGCTATTGGTGACTTGACGCTTTTATCAAGGTTAAATGGCTTTGTC GCTTGCTATCTCAACATGGG
Downstream 100 bases:
>100_bases TTTGCTCATGATGCGGAATGAGCAATAAATTGATATGGAAAGTGCAATATATAAGCAAACGGCCAATCGCTTGTGATTCT TGTTACTAAGGGACTGGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MYSLLRIKMICAMWFCMFPELSFRDVNREEQDYCSLFAHALIASSEVRDFFFNKCGIELKGKEVEVCVEPAPLRDYWYAL GDPKKHSKATEMARKQVLSQFIEYYQVGLDIDETDFFWTVNTKSSNGKGKLRSPGIWESENIRQAELERLFILKYAFNSK LDIMLLTESHVIFIEAKLESAESSYGVSRLTQTEIQNEIGKLITEFIPAFKPLKYLRFTLGFKAKPDISWHEVHQWVGAS PLDQHTKRSFHALCNRYPMK
Sequences:
>Translated_260_residues MYSLLRIKMICAMWFCMFPELSFRDVNREEQDYCSLFAHALIASSEVRDFFFNKCGIELKGKEVEVCVEPAPLRDYWYAL GDPKKHSKATEMARKQVLSQFIEYYQVGLDIDETDFFWTVNTKSSNGKGKLRSPGIWESENIRQAELERLFILKYAFNSK LDIMLLTESHVIFIEAKLESAESSYGVSRLTQTEIQNEIGKLITEFIPAFKPLKYLRFTLGFKAKPDISWHEVHQWVGAS PLDQHTKRSFHALCNRYPMK >Mature_260_residues MYSLLRIKMICAMWFCMFPELSFRDVNREEQDYCSLFAHALIASSEVRDFFFNKCGIELKGKEVEVCVEPAPLRDYWYAL GDPKKHSKATEMARKQVLSQFIEYYQVGLDIDETDFFWTVNTKSSNGKGKLRSPGIWESENIRQAELERLFILKYAFNSK LDIMLLTESHVIFIEAKLESAESSYGVSRLTQTEIQNEIGKLITEFIPAFKPLKYLRFTLGFKAKPDISWHEVHQWVGAS PLDQHTKRSFHALCNRYPMK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30368; Mature: 30368
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSLLRIKMICAMWFCMFPELSFRDVNREEQDYCSLFAHALIASSEVRDFFFNKCGIELK CCHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEC GKEVEVCVEPAPLRDYWYALGDPKKHSKATEMARKQVLSQFIEYYQVGLDIDETDFFWTV CCEEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE NTKSSNGKGKLRSPGIWESENIRQAELERLFILKYAFNSKLDIMLLTESHVIFIEAKLES ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEECCC AESSYGVSRLTQTEIQNEIGKLITEFIPAFKPLKYLRFTLGFKAKPDISWHEVHQWVGAS CCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC PLDQHTKRSFHALCNRYPMK CHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MYSLLRIKMICAMWFCMFPELSFRDVNREEQDYCSLFAHALIASSEVRDFFFNKCGIELK CCHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEC GKEVEVCVEPAPLRDYWYALGDPKKHSKATEMARKQVLSQFIEYYQVGLDIDETDFFWTV CCEEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE NTKSSNGKGKLRSPGIWESENIRQAELERLFILKYAFNSKLDIMLLTESHVIFIEAKLES ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEECCC AESSYGVSRLTQTEIQNEIGKLITEFIPAFKPLKYLRFTLGFKAKPDISWHEVHQWVGAS CCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC PLDQHTKRSFHALCNRYPMK CHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA