| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is cat [H]
Identifier: 126173139
GI number: 126173139
Start: 1019875
End: 1021350
Strand: Direct
Name: cat [H]
Synonym: Sbal_0894
Alternate gene names: 126173139
Gene position: 1019875-1021350 (Clockwise)
Preceding gene: 126173138
Following gene: 126173141
Centisome position: 19.89
GC content: 48.98
Gene sequence:
>1476_bases ATGAGTCAACAACATCAAACAAGTCAGTACTTAACGAGCCAAAACGGCGCCCCAGTGGCCGACGATCAAAACTCACTGTC GGCGGGTGAACGTGGTCCTTTGCTATTACAGGATTGGCATTTAATTGAAAAGTTAGCCCATTTCAACCGTGAGCGTATCC CTGAGCGTATCGTGCATGCCAAAGGTACCGGTGTTTACGGCACATTTACCCTGACTAAAGATTTAAGCGATTACACCATA GCTGACCATTTCAATGGCGTTGGTAAGCAAACTGAGACCTTCATTCGTTTCTCGACTGTCGGTGGTGAAATGGGTTCAGC CGATGCTGAGCGCGATCCACGCGGTTTTGGTTTACGTTTCTACACGGCTCGCGGTAATCACGATATTGTGGGTAACAATA CACCGACTTTCTTCTTGCGTGACGGAATTAAGTTCCCAGACTTTATCCATACGCAAAAGCGTAATCCCCAGACAAACTTA AAAGATCCGCAGGCCATGTGGGACTTTTGGTCATTGAATCCTGAAGCCATGCATCAAGTGACCATTTTGATGTCTGATCG CGGTATTCCAGCAAACTACCGTCAAATGCATGGTTATGGTTCACACACTTTCTCGCTGTGGAATGCCAAGGGCGAGCGTT TCTGGGTGAAGTTTCACTTTAAGTCCCAGCAAGGCGTGGTCAACTTAACTAATGAACAGGCTGATAAATTAAAGGGGATA GATCCCGATTCATCACAGCGCGATATGGTGGTGGCGATTACCGATGGCAATTTCCCGCGTTGGACGGTTAACGTGCAGAT CATGCCTGAGGCGGATGCTAATACTTACCATATCAATCCATTTGATTTAACTAAGGTTTGGCCGCATAGCGACTATCCAT TGCTTGAGATTGGGGTGTTAGAGCTGAATCGTTTGCCACAAAACTACTTTGCCGAAGTTGAGCAAGTGGCATTGGCGCCC AGCAATTTGGTTCCCGGTGTTGGAGCTTCACCCGACAAGATGTTGCAAGCGCGTTTATTTGCCTATGCAGATGCCCAGCG TTATCGCATTGGTGCCAACTACAACCAGTTACCGGTGAACTGCCCACATGCGGCTAAGGCAAATCATCATCAACGTGCGG GCGCTATGGCGGGCACACAATGCCCTTACCATGGCAGCCAAACGGGGGCCGATGCCACGGCAAACTATGGCCCGAACAGC ACAGCGGATGCTTTGGTTGAACCGGTAAACTTTGCCGAGCCACCACTGCGTTTAGAAGGCGAGGCGGCGCGTTATAGCCG TTATAACCAAGACGACTACACCCAAGCGGGTAATCTGTATCGCATCTTCTCAGAAGCAGAGAAAGCACGCTTAGTGGCAA CGATTTCGGGTTCACTCAGTCAAACAAGCTTAGATGTGCAGCAACGTATGCTGACACATTTCGAACAAGCCGATGCGGAT TACGGTCAACGTATTAGAACGGCATTAGGGCTATAA
Upstream 100 bases:
>100_bases TCCATCGACAACACGTCGCAGCCAAGGAGATAAACCATGGCCACCATTTACGATTTAATTGAAACCTGGTTAACCAGCAA TCAAGACTAAGGAGCAGGGC
Downstream 100 bases:
>100_bases ACTGCGTTTTTAAGAAGTTAAGCTTCTAAGTCGACGCTGCTTATCTCAATAAAACCGTCGTAAGTAGAAAGGCCAGTGAT GTTTATCACTGGCCTTTTTG
Product: catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MSQQHQTSQYLTSQNGAPVADDQNSLSAGERGPLLLQDWHLIEKLAHFNRERIPERIVHAKGTGVYGTFTLTKDLSDYTI ADHFNGVGKQTETFIRFSTVGGEMGSADAERDPRGFGLRFYTARGNHDIVGNNTPTFFLRDGIKFPDFIHTQKRNPQTNL KDPQAMWDFWSLNPEAMHQVTILMSDRGIPANYRQMHGYGSHTFSLWNAKGERFWVKFHFKSQQGVVNLTNEQADKLKGI DPDSSQRDMVVAITDGNFPRWTVNVQIMPEADANTYHINPFDLTKVWPHSDYPLLEIGVLELNRLPQNYFAEVEQVALAP SNLVPGVGASPDKMLQARLFAYADAQRYRIGANYNQLPVNCPHAAKANHHQRAGAMAGTQCPYHGSQTGADATANYGPNS TADALVEPVNFAEPPLRLEGEAARYSRYNQDDYTQAGNLYRIFSEAEKARLVATISGSLSQTSLDVQQRMLTHFEQADAD YGQRIRTALGL
Sequences:
>Translated_491_residues MSQQHQTSQYLTSQNGAPVADDQNSLSAGERGPLLLQDWHLIEKLAHFNRERIPERIVHAKGTGVYGTFTLTKDLSDYTI ADHFNGVGKQTETFIRFSTVGGEMGSADAERDPRGFGLRFYTARGNHDIVGNNTPTFFLRDGIKFPDFIHTQKRNPQTNL KDPQAMWDFWSLNPEAMHQVTILMSDRGIPANYRQMHGYGSHTFSLWNAKGERFWVKFHFKSQQGVVNLTNEQADKLKGI DPDSSQRDMVVAITDGNFPRWTVNVQIMPEADANTYHINPFDLTKVWPHSDYPLLEIGVLELNRLPQNYFAEVEQVALAP SNLVPGVGASPDKMLQARLFAYADAQRYRIGANYNQLPVNCPHAAKANHHQRAGAMAGTQCPYHGSQTGADATANYGPNS TADALVEPVNFAEPPLRLEGEAARYSRYNQDDYTQAGNLYRIFSEAEKARLVATISGSLSQTSLDVQQRMLTHFEQADAD YGQRIRTALGL >Mature_490_residues SQQHQTSQYLTSQNGAPVADDQNSLSAGERGPLLLQDWHLIEKLAHFNRERIPERIVHAKGTGVYGTFTLTKDLSDYTIA DHFNGVGKQTETFIRFSTVGGEMGSADAERDPRGFGLRFYTARGNHDIVGNNTPTFFLRDGIKFPDFIHTQKRNPQTNLK DPQAMWDFWSLNPEAMHQVTILMSDRGIPANYRQMHGYGSHTFSLWNAKGERFWVKFHFKSQQGVVNLTNEQADKLKGID PDSSQRDMVVAITDGNFPRWTVNVQIMPEADANTYHINPFDLTKVWPHSDYPLLEIGVLELNRLPQNYFAEVEQVALAPS NLVPGVGASPDKMLQARLFAYADAQRYRIGANYNQLPVNCPHAAKANHHQRAGAMAGTQCPYHGSQTGADATANYGPNST ADALVEPVNFAEPPLRLEGEAARYSRYNQDDYTQAGNLYRIFSEAEKARLVATISGSLSQTSLDVQQRMLTHFEQADADY GQRIRTALGL
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=485, Percent_Identity=50.5154639175258, Blast_Score=502, Evalue=1e-142, Organism=Escherichia coli, GI48994891, Length=502, Percent_Identity=40.0398406374502, Blast_Score=345, Evalue=4e-96, Organism=Caenorhabditis elegans, GI71998444, Length=482, Percent_Identity=49.5850622406639, Blast_Score=493, Evalue=1e-139, Organism=Caenorhabditis elegans, GI25151141, Length=487, Percent_Identity=47.8439425051335, Blast_Score=474, Evalue=1e-134, Organism=Caenorhabditis elegans, GI25147792, Length=482, Percent_Identity=48.3402489626556, Blast_Score=474, Evalue=1e-134, Organism=Saccharomyces cerevisiae, GI6320462, Length=491, Percent_Identity=44.806517311609, Blast_Score=409, Evalue=1e-115, Organism=Saccharomyces cerevisiae, GI6321525, Length=374, Percent_Identity=45.7219251336898, Blast_Score=353, Evalue=4e-98, Organism=Drosophila melanogaster, GI17981717, Length=484, Percent_Identity=49.1735537190083, Blast_Score=479, Evalue=1e-135, Organism=Drosophila melanogaster, GI19920968, Length=487, Percent_Identity=42.7104722792608, Blast_Score=425, Evalue=1e-119,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 54966; Mature: 54835
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQHQTSQYLTSQNGAPVADDQNSLSAGERGPLLLQDWHLIEKLAHFNRERIPERIVHA CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCHHHHHHHHHHC KGTGVYGTFTLTKDLSDYTIADHFNGVGKQTETFIRFSTVGGEMGSADAERDPRGFGLRF CCCCEEEEEEEECCCCCCCHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEE YTARGNHDIVGNNTPTFFLRDGIKFPDFIHTQKRNPQTNLKDPQAMWDFWSLNPEAMHQV EEECCCCCEECCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHEEE TILMSDRGIPANYRQMHGYGSHTFSLWNAKGERFWVKFHFKSQQGVVNLTNEQADKLKGI EEEEECCCCCCCHHHHCCCCCCEEEEECCCCCEEEEEEEEECCCCEEEECCHHHHHHCCC DPDSSQRDMVVAITDGNFPRWTVNVQIMPEADANTYHINPFDLTKVWPHSDYPLLEIGVL CCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCEEEECCCCCEEECCCCCCCEEEEEHH ELNRLPQNYFAEVEQVALAPSNLVPGVGASPDKMLQARLFAYADAQRYRIGANYNQLPVN HHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCC CPHAAKANHHQRAGAMAGTQCPYHGSQTGADATANYGPNSTADALVEPVNFAEPPLRLEG CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEECC EAARYSRYNQDDYTQAGNLYRIFSEAEKARLVATISGSLSQTSLDVQQRMLTHFEQADAD CHHHHHCCCCCHHHHCCCEEEEHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCHH YGQRIRTALGL HHHHHHHHHCC >Mature Secondary Structure SQQHQTSQYLTSQNGAPVADDQNSLSAGERGPLLLQDWHLIEKLAHFNRERIPERIVHA CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCHHHHHHHHHHC KGTGVYGTFTLTKDLSDYTIADHFNGVGKQTETFIRFSTVGGEMGSADAERDPRGFGLRF CCCCEEEEEEEECCCCCCCHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEE YTARGNHDIVGNNTPTFFLRDGIKFPDFIHTQKRNPQTNLKDPQAMWDFWSLNPEAMHQV EEECCCCCEECCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHEEE TILMSDRGIPANYRQMHGYGSHTFSLWNAKGERFWVKFHFKSQQGVVNLTNEQADKLKGI EEEEECCCCCCCHHHHCCCCCCEEEEECCCCCEEEEEEEEECCCCEEEECCHHHHHHCCC DPDSSQRDMVVAITDGNFPRWTVNVQIMPEADANTYHINPFDLTKVWPHSDYPLLEIGVL CCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCEEEECCCCCEEECCCCCCCEEEEEHH ELNRLPQNYFAEVEQVALAPSNLVPGVGASPDKMLQARLFAYADAQRYRIGANYNQLPVN HHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCC CPHAAKANHHQRAGAMAGTQCPYHGSQTGADATANYGPNSTADALVEPVNFAEPPLRLEG CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEECC EAARYSRYNQDDYTQAGNLYRIFSEAEKARLVATISGSLSQTSLDVQQRMLTHFEQADAD CHHHHHCCCCCHHHHCCCEEEEHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCHH YGQRIRTALGL HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA