| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is btuB [H]
Identifier: 126172928
GI number: 126172928
Start: 772272
End: 774830
Strand: Direct
Name: btuB [H]
Synonym: Sbal_0680
Alternate gene names: 126172928
Gene position: 772272-774830 (Clockwise)
Preceding gene: 126172923
Following gene: 126172929
Centisome position: 15.06
GC content: 45.84
Gene sequence:
>2559_bases ATGAACAGACCTCAGATTCTACCCAGTGCTTGTGCCATCGCGATTGCTTTAGCATTTGCGCCAACAGTAGCCCATGCTGC CGATAAAGGCGCAGAAAAAGTTGAACGTATTGAAGTGACGGGTTCTCGTATTAAACGTACAGATATCGAAGGCCCTTCCC CGATCCAATCGATCAGCAAAGACGATATTGCTAATATGGGGTTCGATAACTTACAGCAATTGCTCGAACGTATGCCTGCG AACGGTGCTGGTGCGTTTTCTACCCGTGGTAATAGCCAAGATTCAACTGCCAACGGTGGCGCGTCTATCAGTTTGCGTGG TTTAGGTCCTGATGCGACCTTAGTGTTGATTAATGGCCGCCGGGTTGCTGCGAGTGCTTTTGCTGAAGGTATTACTAATT CTTTCGTTGATATCAATAATATCCCTGTTTCAGCGATCGAACGTATCGACATACTCAAGGACGGTGCATCGGCTATTTAT GGCTCTGATGCGATTGCCGGTGTGGTCAACATTATCCTGAAGAAAGACATTGAGGGTATTGAAGTCAATCTCGGCTACGG TGATGCTTCAGGTACGGGTTACAATGAAAGCACGGCAAACATGGTCTGGGGGATGAAGTCTGATAAGGGCAGTGCCTCTA TTATTCTCGACTATTTTAAAAATGATACCTTAGCTGCAACGGATTTGGGACGTTTTGGAACTGCAGATCAGAGTCCTTAC GGTGGTGAAGATTCGCGTTCTTCCCGAGGTTTCCCTGGCTATTTTTATGTGGATGGGGTGCCGACAGTTGACCCTGCTTG CCCTGCTGATCGCAATATAGACGGTGAAGTTTGTGTCTTTGATTATGGGCCGTATAACCTTGTTGTGCCTGCCGCTGAAC GTGTGGGTGCTATTGGTCAATTCGAATATCATTTCAATGATGATTTAACTGCTTTCCTTGAATTAGCTGCCCAGCACAAC ACGTCGGAAGCGGGCGGTGCACCAACACCTCTTGATGAGAAAGCAGGCTTAACTGTACCTGGTAGCCATCCAAATAACCC TTGGGGGAAAGATATTAAAATCGGTCGTTTCCGTACTGTTGATGCGGGGGCGCGTCGTTGGGATATTGAATCCGATACTC TACGTTTAGTCGCGGGTTTACGCGGCGTAGTTAAAGATTGGGACTGGGAAGCTTCGATGCAAAAAGGTCGCAGTGAGTCC ACTCAAACGGGTGATCGCAGCCAAGGTTGGGTCAGAACCGATTACTTGCAACGTGAAATCGATGCGGGTCGCTACAATCC TTTCGGTGGCACCATGAACTCTCAAGATGTCATTGATGATATTACCACCAGTCTAGTGCGCCAAGGTCTGTCAACTATGA CTTCCTATGCGGCTAATATCTCAGGTCAAGCATTCACCCTTGCCGATCGCGATATCATGATGGCGGCTGGAGTTGAATAT CGTGAAGAAGCGATCAGCGACGAGCCTGATGAGCAATTTCAACGTGGATTGATTTTTGGTACCGAAGCTGTGTCTGCGAA GGGCGATCGCGATCAATGGGCGGCGTATACTGAATTTTCTATCCCAGTAACGGATAACTTCGAGCTGCAACTCGCGGGTC GATATGATCACTACAGTGATTTTGGTTCAACCACAAACCCTAAAGTTGCTTTCCAATGGGGGATTACCGATGAACTGACA GCGCGAGCTTCATGGTCAACAGGGTTCCGTGCGCCTTCATTAGCGCAAATTGGTTTAGGTCCATCTGAGGAAAGTAGCTT CCTAATTGATAAATATCGCTGCGCAGCCGACGGTCAAGGTTGTACCTTGTCTGATGAAACGACTGAGTTTGCAGGTAACC CAAAGTTAAAGGCTGAAGAGTCAGAGACTTGGAATATCGGCATGATATGGGCGCCAAGCCAGAAGTTCGATATTGGTTTC GATATCTACAGCATTACTCAAGATAATAAGATTGATAAGTTGTTACTGCAGGATATTTATGACGCTAATTGTAACGATCA GAACAGCACAGTCTGCGTGCGCTTAGCACCTCAAGTTGGTCAAACATTTGGTGCTCTTGATGTGATCCGCTCAAGCTTTG TTAACTTAGGCTCTCAACAAGTTCAAGGTATGGATGTTTCGACTCATTATGGATTCGAACTCGATGGCTATGGTGACCTT AAGTTCGGTCTTGAATGGAGTTATCTGCATAACTTTGAAAAAGATGATACACATCAAGTGGTCGACTATACCGGAGAGTA TAAGTATCCAAAGAACCGTTGGTTAGCAACAACCAATTGGACTATGGATAACTTTGCCGCCAATTTAAATTTAAGCTATA TCGGTGAGTTTGAAGATTTTAACAAAACTCGTACGATTGATGCTCAAATATTAGTCGACATGTCAGGTACTTATCGCTTC AATGAAATGTTCAAACTGACATTGGGTGTGAACAACGTATTTGACGAAGAGCCACCATTTGCTATCGGTGATGGTGATAC CGATCTCTACGGCTATGTGACTTCTGTACATAACCCTATGGGTCGCTACATCTACACTAAACTCACTATGAACTTCTAA
Upstream 100 bases:
>100_bases ATTGACTTTGGTTTGTAACTCATTACCTTGTGTATTGTTAATTTATGGTTTTCTAATGGTTAATGTGATTTTAATAAAAT AGATAAAACAAGGGATATGT
Downstream 100 bases:
>100_bases TATTAAGCCTACGTGCTTTATAGCTAAGTACTTTATATCAAAGTGTAGTGAAATCGAAACGGCGTATTAAGCGCCGTTTT TTATGGGCAGATTTGCACTA
Product: TonB-dependent receptor
Products: NA
Alternate protein names: Cobalamin receptor; Outer membrane cobalamin translocator [H]
Number of amino acids: Translated: 852; Mature: 852
Protein sequence:
>852_residues MNRPQILPSACAIAIALAFAPTVAHAADKGAEKVERIEVTGSRIKRTDIEGPSPIQSISKDDIANMGFDNLQQLLERMPA NGAGAFSTRGNSQDSTANGGASISLRGLGPDATLVLINGRRVAASAFAEGITNSFVDINNIPVSAIERIDILKDGASAIY GSDAIAGVVNIILKKDIEGIEVNLGYGDASGTGYNESTANMVWGMKSDKGSASIILDYFKNDTLAATDLGRFGTADQSPY GGEDSRSSRGFPGYFYVDGVPTVDPACPADRNIDGEVCVFDYGPYNLVVPAAERVGAIGQFEYHFNDDLTAFLELAAQHN TSEAGGAPTPLDEKAGLTVPGSHPNNPWGKDIKIGRFRTVDAGARRWDIESDTLRLVAGLRGVVKDWDWEASMQKGRSES TQTGDRSQGWVRTDYLQREIDAGRYNPFGGTMNSQDVIDDITTSLVRQGLSTMTSYAANISGQAFTLADRDIMMAAGVEY REEAISDEPDEQFQRGLIFGTEAVSAKGDRDQWAAYTEFSIPVTDNFELQLAGRYDHYSDFGSTTNPKVAFQWGITDELT ARASWSTGFRAPSLAQIGLGPSEESSFLIDKYRCAADGQGCTLSDETTEFAGNPKLKAEESETWNIGMIWAPSQKFDIGF DIYSITQDNKIDKLLLQDIYDANCNDQNSTVCVRLAPQVGQTFGALDVIRSSFVNLGSQQVQGMDVSTHYGFELDGYGDL KFGLEWSYLHNFEKDDTHQVVDYTGEYKYPKNRWLATTNWTMDNFAANLNLSYIGEFEDFNKTRTIDAQILVDMSGTYRF NEMFKLTLGVNNVFDEEPPFAIGDGDTDLYGYVTSVHNPMGRYIYTKLTMNF
Sequences:
>Translated_852_residues MNRPQILPSACAIAIALAFAPTVAHAADKGAEKVERIEVTGSRIKRTDIEGPSPIQSISKDDIANMGFDNLQQLLERMPA NGAGAFSTRGNSQDSTANGGASISLRGLGPDATLVLINGRRVAASAFAEGITNSFVDINNIPVSAIERIDILKDGASAIY GSDAIAGVVNIILKKDIEGIEVNLGYGDASGTGYNESTANMVWGMKSDKGSASIILDYFKNDTLAATDLGRFGTADQSPY GGEDSRSSRGFPGYFYVDGVPTVDPACPADRNIDGEVCVFDYGPYNLVVPAAERVGAIGQFEYHFNDDLTAFLELAAQHN TSEAGGAPTPLDEKAGLTVPGSHPNNPWGKDIKIGRFRTVDAGARRWDIESDTLRLVAGLRGVVKDWDWEASMQKGRSES TQTGDRSQGWVRTDYLQREIDAGRYNPFGGTMNSQDVIDDITTSLVRQGLSTMTSYAANISGQAFTLADRDIMMAAGVEY REEAISDEPDEQFQRGLIFGTEAVSAKGDRDQWAAYTEFSIPVTDNFELQLAGRYDHYSDFGSTTNPKVAFQWGITDELT ARASWSTGFRAPSLAQIGLGPSEESSFLIDKYRCAADGQGCTLSDETTEFAGNPKLKAEESETWNIGMIWAPSQKFDIGF DIYSITQDNKIDKLLLQDIYDANCNDQNSTVCVRLAPQVGQTFGALDVIRSSFVNLGSQQVQGMDVSTHYGFELDGYGDL KFGLEWSYLHNFEKDDTHQVVDYTGEYKYPKNRWLATTNWTMDNFAANLNLSYIGEFEDFNKTRTIDAQILVDMSGTYRF NEMFKLTLGVNNVFDEEPPFAIGDGDTDLYGYVTSVHNPMGRYIYTKLTMNF >Mature_852_residues MNRPQILPSACAIAIALAFAPTVAHAADKGAEKVERIEVTGSRIKRTDIEGPSPIQSISKDDIANMGFDNLQQLLERMPA NGAGAFSTRGNSQDSTANGGASISLRGLGPDATLVLINGRRVAASAFAEGITNSFVDINNIPVSAIERIDILKDGASAIY GSDAIAGVVNIILKKDIEGIEVNLGYGDASGTGYNESTANMVWGMKSDKGSASIILDYFKNDTLAATDLGRFGTADQSPY GGEDSRSSRGFPGYFYVDGVPTVDPACPADRNIDGEVCVFDYGPYNLVVPAAERVGAIGQFEYHFNDDLTAFLELAAQHN TSEAGGAPTPLDEKAGLTVPGSHPNNPWGKDIKIGRFRTVDAGARRWDIESDTLRLVAGLRGVVKDWDWEASMQKGRSES TQTGDRSQGWVRTDYLQREIDAGRYNPFGGTMNSQDVIDDITTSLVRQGLSTMTSYAANISGQAFTLADRDIMMAAGVEY REEAISDEPDEQFQRGLIFGTEAVSAKGDRDQWAAYTEFSIPVTDNFELQLAGRYDHYSDFGSTTNPKVAFQWGITDELT ARASWSTGFRAPSLAQIGLGPSEESSFLIDKYRCAADGQGCTLSDETTEFAGNPKLKAEESETWNIGMIWAPSQKFDIGF DIYSITQDNKIDKLLLQDIYDANCNDQNSTVCVRLAPQVGQTFGALDVIRSSFVNLGSQQVQGMDVSTHYGFELDGYGDL KFGLEWSYLHNFEKDDTHQVVDYTGEYKYPKNRWLATTNWTMDNFAANLNLSYIGEFEDFNKTRTIDAQILVDMSGTYRF NEMFKLTLGVNNVFDEEPPFAIGDGDTDLYGYVTSVHNPMGRYIYTKLTMNF
Specific function: Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790405, Length=254, Percent_Identity=27.1653543307087, Blast_Score=86, Evalue=1e-17, Organism=Escherichia coli, GI1788478, Length=172, Percent_Identity=34.3023255813954, Blast_Score=84, Evalue=5e-17, Organism=Escherichia coli, GI1786798, Length=133, Percent_Identity=31.5789473684211, Blast_Score=63, Evalue=6e-11,
Paralogues:
None
Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010101 - InterPro: IPR010916 - InterPro: IPR010917 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 93199; Mature: 93199
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRPQILPSACAIAIALAFAPTVAHAADKGAEKVERIEVTGSRIKRTDIEGPSPIQSISK CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEECCCEEEECCCCCCCHHHHCCH DDIANMGFDNLQQLLERMPANGAGAFSTRGNSQDSTANGGASISLRGLGPDATLVLINGR HHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECC RVAASAFAEGITNSFVDINNIPVSAIERIDILKDGASAIYGSDAIAGVVNIILKKDIEGI CHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHCCCHHEECCHHHHHHHHHHHHCCCCCE EVNLGYGDASGTGYNESTANMVWGMKSDKGSASIILDYFKNDTLAATDLGRFGTADQSPY EEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCC GGEDSRSSRGFPGYFYVDGVPTVDPACPADRNIDGEVCVFDYGPYNLVVPAAERVGAIGQ CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECHHHCCCCEE FEYHFNDDLTAFLELAAQHNTSEAGGAPTPLDEKAGLTVPGSHPNNPWGKDIKIGRFRTV EEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEECEEEEE DAGARRWDIESDTLRLVAGLRGVVKDWDWEASMQKGRSESTQTGDRSQGWVRTDYLQREI CCCCEEECCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHH DAGRYNPFGGTMNSQDVIDDITTSLVRQGLSTMTSYAANISGQAFTLADRDIMMAAGVEY CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCHH REEAISDEPDEQFQRGLIFGTEAVSAKGDRDQWAAYTEFSIPVTDNFELQLAGRYDHYSD HHHHCCCCCHHHHHCCEEEECHHHCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCHHH FGSTTNPKVAFQWGITDELTARASWSTGFRAPSLAQIGLGPSEESSFLIDKYRCAADGQG CCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCC CTLSDETTEFAGNPKLKAEESETWNIGMIWAPSQKFDIGFDIYSITQDNKIDKLLLQDIY CEECCCCHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHH DANCNDQNSTVCVRLAPQVGQTFGALDVIRSSFVNLGSQQVQGMDVSTHYGFELDGYGDL CCCCCCCCCEEEEEECHHHCCHHHHHHHHHHHHHHCCHHHHCCEEEEEECCEEECCCCCE KFGLEWSYLHNFEKDDTHQVVDYTGEYKYPKNRWLATTNWTMDNFAANLNLSYIGEFEDF EECEEEHHHHCCCCCCCHHHEECCCCCCCCCCCEEEEECCCHHHHEEECCEEEECCHHHC NKTRTIDAQILVDMSGTYRFNEMFKLTLGVNNVFDEEPPFAIGDGDTDLYGYVTSVHNPM CCCEEEEEEEEEECCCCEEECEEEEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHCCCC GRYIYTKLTMNF CCEEEEEEEECC >Mature Secondary Structure MNRPQILPSACAIAIALAFAPTVAHAADKGAEKVERIEVTGSRIKRTDIEGPSPIQSISK CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEECCCEEEECCCCCCCHHHHCCH DDIANMGFDNLQQLLERMPANGAGAFSTRGNSQDSTANGGASISLRGLGPDATLVLINGR HHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECC RVAASAFAEGITNSFVDINNIPVSAIERIDILKDGASAIYGSDAIAGVVNIILKKDIEGI CHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHCCCHHEECCHHHHHHHHHHHHCCCCCE EVNLGYGDASGTGYNESTANMVWGMKSDKGSASIILDYFKNDTLAATDLGRFGTADQSPY EEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCC GGEDSRSSRGFPGYFYVDGVPTVDPACPADRNIDGEVCVFDYGPYNLVVPAAERVGAIGQ CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECHHHCCCCEE FEYHFNDDLTAFLELAAQHNTSEAGGAPTPLDEKAGLTVPGSHPNNPWGKDIKIGRFRTV EEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEECEEEEE DAGARRWDIESDTLRLVAGLRGVVKDWDWEASMQKGRSESTQTGDRSQGWVRTDYLQREI CCCCEEECCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHH DAGRYNPFGGTMNSQDVIDDITTSLVRQGLSTMTSYAANISGQAFTLADRDIMMAAGVEY CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCHH REEAISDEPDEQFQRGLIFGTEAVSAKGDRDQWAAYTEFSIPVTDNFELQLAGRYDHYSD HHHHCCCCCHHHHHCCEEEECHHHCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCHHH FGSTTNPKVAFQWGITDELTARASWSTGFRAPSLAQIGLGPSEESSFLIDKYRCAADGQG CCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCC CTLSDETTEFAGNPKLKAEESETWNIGMIWAPSQKFDIGFDIYSITQDNKIDKLLLQDIY CEECCCCHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHH DANCNDQNSTVCVRLAPQVGQTFGALDVIRSSFVNLGSQQVQGMDVSTHYGFELDGYGDL CCCCCCCCCEEEEEECHHHCCHHHHHHHHHHHHHHCCHHHHCCEEEEEECCEEECCCCCE KFGLEWSYLHNFEKDDTHQVVDYTGEYKYPKNRWLATTNWTMDNFAANLNLSYIGEFEDF EECEEEHHHHCCCCCCCHHHEECCCCCCCCCCCEEEEECCCHHHHEEECCEEEECCHHHC NKTRTIDAQILVDMSGTYRFNEMFKLTLGVNNVFDEEPPFAIGDGDTDLYGYVTSVHNPM CCCEEEEEEEEEECCCCEEECEEEEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHCCCC GRYIYTKLTMNF CCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA