| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126172893
Identifier: 126172893
GI number: 126172893
Start: 730913
End: 732391
Strand: Direct
Name: 126172893
Synonym: Sbal_0644
Alternate gene names: NA
Gene position: 730913-732391 (Clockwise)
Preceding gene: 126172892
Following gene: 126172895
Centisome position: 14.26
GC content: 44.96
Gene sequence:
>1479_bases ATGAGAACGATAACGGTATTATCCATCGCTGGTACACTGTTTGCTGTATGTACGCTGTCTGCGTCGGCAAATCAAGATTA CCCAAGTGTAAGTGCTAAATGTCCTGTCGAAGAAAGCTGGCTAACAAGTCCCTCATTACCCCAAGAAGTTAAAACGAGTG CATCCGATGGCAGCTCTACTTTTTGTGATTTTTATCAGTTCTCAACTCAAACCTTTTTATACCTGATGTCGCAAGGTAAA AGTGGTCTTCGTAATTATCAGGACGAAGCCAATTATCCGGTACTTGAGTTTAATGACGATGGTTCACCAGCTAACTCCTG CGATCGTGAAATTACGGGCAAAGTGCTGCGAACTCATCTACTCAAAACGGCGGGTGCGTCCTCTATTACCACTGGTCAAG CTGGAGGCGGTGCCACTATTTACGCGCAAGATGGTAATGTGGTGTATTACAGTGTCAGATTCAGTAAAGCATTATGTGAT TTAAGCAGCAGTGCCGTTGAGTTGCAAAAGAAAAATATAACTAATTTCCCTGCAGGTTCTATGGAGCTTAAACTTGGCTG GAAAGTACTCTCTAGCGCTGAAATCGCTTCAAATAGCTTTGTGACCCAAGAGCAAGTGGTCGCTAATAAAAAGGTCACTT TAGGCCTTGCTGGTATGCACTTAGTAACAGCGACAGCAAATCATCCCGAGTTTATTTGGTCGACCTACGAGCATAAAACC AATACACCAGATTGCACGCCAGCAACTCCGCAAACTGGTACCGATTGGACTTTTGCTAGCGCGACATGTACTGCGGGATT GCCAGACACTGCTGCGAAAGGCAATACCTGTAACTTTAATAGTCCACTGAAAAATCAAACATCACCAACGGGTGTGCCCA CTAATATTTGTCGCGTTTACCCAGATGGCACTAGCCCTGATGATTTAAAAGCTGGTGAGAATATTGCTGATATTACGGCC CAGAATACAGGGCTATTGGCCTTGTTGGCTCAACCAAGTACGCCAGCAGGCATGAAGGTATTAAGTAATTACTTTACTGT TGGTGCCTTGTGGGTGAGTGACACTGGCAAAAACTCAGGCGGTGTGGGCGTGCCAAATGAGCGTGGCTCACTGCGATTGG CAAACTCAGTGGCCGAAACCGATTATCAACATGTGGATCTCACTTCTACTTTTGCGAGTAATTGCTTCGGTTGCCATAAC TATATCGGCAACAGTCAAACTGTGAGTAATAACATTACTTCACAGGCGTTGAGCCATATTTTTAAAGACATTAAAATTGG CCAAGGTCAGAGCATCGATGTGAACTCACCAGACACGATTAATAGTCAAAATGCGGCTTCCACCATTTGTCAGAGCGGAC CTACATCGACCTCTCAAGTCGGTGTATGTCCTAGTACGGCGAGTTATTTGACATGGAATGGTCAGTGGACAAATAGTAAC GCTAGTGCAGGCTCTGTTTGTGGCTGTGTGAGTAAGTAA
Upstream 100 bases:
>100_bases TTGCTCGATTTGATAGCACAATCCACCACAACTAAACCAAGAAGTACTTACTAATGCAATGTAAAACCTAACAATAAACT CAAAGGAAGGAGTGTCGAAC
Downstream 100 bases:
>100_bases TTGTTAGCTAATTGTTAATTACTACCATTGAGTTAAGCAGCATCAAGCCTGTTATTTGGCAATAGCTTTACGTATTAAAA AGCGAACTTTAGGGTTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MRTITVLSIAGTLFAVCTLSASANQDYPSVSAKCPVEESWLTSPSLPQEVKTSASDGSSTFCDFYQFSTQTFLYLMSQGK SGLRNYQDEANYPVLEFNDDGSPANSCDREITGKVLRTHLLKTAGASSITTGQAGGGATIYAQDGNVVYYSVRFSKALCD LSSSAVELQKKNITNFPAGSMELKLGWKVLSSAEIASNSFVTQEQVVANKKVTLGLAGMHLVTATANHPEFIWSTYEHKT NTPDCTPATPQTGTDWTFASATCTAGLPDTAAKGNTCNFNSPLKNQTSPTGVPTNICRVYPDGTSPDDLKAGENIADITA QNTGLLALLAQPSTPAGMKVLSNYFTVGALWVSDTGKNSGGVGVPNERGSLRLANSVAETDYQHVDLTSTFASNCFGCHN YIGNSQTVSNNITSQALSHIFKDIKIGQGQSIDVNSPDTINSQNAASTICQSGPTSTSQVGVCPSTASYLTWNGQWTNSN ASAGSVCGCVSK
Sequences:
>Translated_492_residues MRTITVLSIAGTLFAVCTLSASANQDYPSVSAKCPVEESWLTSPSLPQEVKTSASDGSSTFCDFYQFSTQTFLYLMSQGK SGLRNYQDEANYPVLEFNDDGSPANSCDREITGKVLRTHLLKTAGASSITTGQAGGGATIYAQDGNVVYYSVRFSKALCD LSSSAVELQKKNITNFPAGSMELKLGWKVLSSAEIASNSFVTQEQVVANKKVTLGLAGMHLVTATANHPEFIWSTYEHKT NTPDCTPATPQTGTDWTFASATCTAGLPDTAAKGNTCNFNSPLKNQTSPTGVPTNICRVYPDGTSPDDLKAGENIADITA QNTGLLALLAQPSTPAGMKVLSNYFTVGALWVSDTGKNSGGVGVPNERGSLRLANSVAETDYQHVDLTSTFASNCFGCHN YIGNSQTVSNNITSQALSHIFKDIKIGQGQSIDVNSPDTINSQNAASTICQSGPTSTSQVGVCPSTASYLTWNGQWTNSN ASAGSVCGCVSK >Mature_492_residues MRTITVLSIAGTLFAVCTLSASANQDYPSVSAKCPVEESWLTSPSLPQEVKTSASDGSSTFCDFYQFSTQTFLYLMSQGK SGLRNYQDEANYPVLEFNDDGSPANSCDREITGKVLRTHLLKTAGASSITTGQAGGGATIYAQDGNVVYYSVRFSKALCD LSSSAVELQKKNITNFPAGSMELKLGWKVLSSAEIASNSFVTQEQVVANKKVTLGLAGMHLVTATANHPEFIWSTYEHKT NTPDCTPATPQTGTDWTFASATCTAGLPDTAAKGNTCNFNSPLKNQTSPTGVPTNICRVYPDGTSPDDLKAGENIADITA QNTGLLALLAQPSTPAGMKVLSNYFTVGALWVSDTGKNSGGVGVPNERGSLRLANSVAETDYQHVDLTSTFASNCFGCHN YIGNSQTVSNNITSQALSHIFKDIKIGQGQSIDVNSPDTINSQNAASTICQSGPTSTSQVGVCPSTASYLTWNGQWTNSN ASAGSVCGCVSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51854; Mature: 51854
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTITVLSIAGTLFAVCTLSASANQDYPSVSAKCPVEESWLTSPSLPQEVKTSASDGSST CCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHCCCCCCCCH FCDFYQFSTQTFLYLMSQGKSGLRNYQDEANYPVLEFNDDGSPANSCDREITGKVLRTHL HHHHHHHHHHHHHHHHHCCCHHHHCCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH LKTAGASSITTGQAGGGATIYAQDGNVVYYSVRFSKALCDLSSSAVELQKKNITNFPAGS HHHCCCCCCCCCCCCCCEEEEEECCCEEEEEEEHHHHHHHCCHHHHHHHHCCCCCCCCCC MELKLGWKVLSSAEIASNSFVTQEQVVANKKVTLGLAGMHLVTATANHPEFIWSTYEHKT EEEEECCEECCCHHHHCCCCCCHHHHHHCCEEEEEECCEEEEEECCCCCHHEEEHHCCCC NTPDCTPATPQTGTDWTFASATCTAGLPDTAAKGNTCNFNSPLKNQTSPTGVPTNICRVY CCCCCCCCCCCCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC PDGTSPDDLKAGENIADITAQNTGLLALLAQPSTPAGMKVLSNYFTVGALWVSDTGKNSG CCCCCCCHHCCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHEEEEEEEECCCCCCC GVGVPNERGSLRLANSVAETDYQHVDLTSTFASNCFGCHNYIGNSQTVSNNITSQALSHI CCCCCCCCCCEEEEHHHHHCCCCEEEHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHH FKDIKIGQGQSIDVNSPDTINSQNAASTICQSGPTSTSQVGVCPSTASYLTWNGQWTNSN HHHHCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCEEEECCEECCCC ASAGSVCGCVSK CCCCCCCCCCCC >Mature Secondary Structure MRTITVLSIAGTLFAVCTLSASANQDYPSVSAKCPVEESWLTSPSLPQEVKTSASDGSST CCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHCCCCCCCCH FCDFYQFSTQTFLYLMSQGKSGLRNYQDEANYPVLEFNDDGSPANSCDREITGKVLRTHL HHHHHHHHHHHHHHHHHCCCHHHHCCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH LKTAGASSITTGQAGGGATIYAQDGNVVYYSVRFSKALCDLSSSAVELQKKNITNFPAGS HHHCCCCCCCCCCCCCCEEEEEECCCEEEEEEEHHHHHHHCCHHHHHHHHCCCCCCCCCC MELKLGWKVLSSAEIASNSFVTQEQVVANKKVTLGLAGMHLVTATANHPEFIWSTYEHKT EEEEECCEECCCHHHHCCCCCCHHHHHHCCEEEEEECCEEEEEECCCCCHHEEEHHCCCC NTPDCTPATPQTGTDWTFASATCTAGLPDTAAKGNTCNFNSPLKNQTSPTGVPTNICRVY CCCCCCCCCCCCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC PDGTSPDDLKAGENIADITAQNTGLLALLAQPSTPAGMKVLSNYFTVGALWVSDTGKNSG CCCCCCCHHCCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHEEEEEEEECCCCCCC GVGVPNERGSLRLANSVAETDYQHVDLTSTFASNCFGCHNYIGNSQTVSNNITSQALSHI CCCCCCCCCCEEEEHHHHHCCCCEEEHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHH FKDIKIGQGQSIDVNSPDTINSQNAASTICQSGPTSTSQVGVCPSTASYLTWNGQWTNSN HHHHCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCEEEECCEECCCC ASAGSVCGCVSK CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA