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The map label for this gene is yraR [H]

Identifier: 126172873

GI number: 126172873

Start: 710171

End: 710800

Strand: Direct

Name: yraR [H]

Synonym: Sbal_0624

Alternate gene names: 126172873

Gene position: 710171-710800 (Clockwise)

Preceding gene: 126172872

Following gene: 126172874

Centisome position: 13.85

GC content: 46.19

Gene sequence:

>630_bases
GTGAAACTTATTCTTATCGGTGCGAGTGGATTAGTGGGTCAACATGTATTGCAGATAGCACTTGATGATGCGCGGATTGA
ACGTGTTATTGCGCCAACTCGTCAGCCGCTACCGACGCACCCTAAGCTTTTTGCCCCTATTGTCAGCTTTGACGACTTAC
CCGCTAACGCGGATTGGTGGTCGGCCGATGCCTTGATTTGTACGCTGGGAACGACCATGAAAAAGGCTAAATTCCAAGCT
GCATTCAAACGAGTTGATTATGACTATCCGCTCATGGCTGCCAAGCTGGCAAAGCAACAAGGAACTGAGACATATGTACT
TAACTCTGCGATTGGCGCCAACGTATCTTCGCGCTTTTTTTATAACCAGGTGAAAGGTGAATTGGAGCAATCGTTAACGC
AGTGCCATTTTACTTCGCTGAGTTTTGTTCGTCCGGGAATGATTGGCGGTAATCGCCAAGAGTCGAGACCAAGTGAGCGA
CTGATGATGCTGACGTTAATGTTACTTGGTCCAATATTACCGAAAAAGTGTTGCATAAATCCTGCTCACACTATAGCAAA
GGCATTGTTAGAAGCCGCCATTGCAAAACGAGCCGGAATACACGAAATCAATTCTGAAGCCTTGATTTAA

Upstream 100 bases:

>100_bases
GCTCACTCAAGGTGAAATACCTATTAATGATGCAATAAGCAGGTTAGTAGCCCAATGAAAAAACTGATGTTACGTCAGCT
ATTCGGCTCTAGGAGGAAAA

Downstream 100 bases:

>100_bases
CTGTTTGATAGTTAATTAGATAGAGAGAAATAATTATGCCAATGGTCGAATACAGTGCAGTGTTTGATGGCGATGCAGAA
CGAGTATGGTCGGTATTAAA

Product: nucleoside-diphosphate-sugar epimerase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MKLILIGASGLVGQHVLQIALDDARIERVIAPTRQPLPTHPKLFAPIVSFDDLPANADWWSADALICTLGTTMKKAKFQA
AFKRVDYDYPLMAAKLAKQQGTETYVLNSAIGANVSSRFFYNQVKGELEQSLTQCHFTSLSFVRPGMIGGNRQESRPSER
LMMLTLMLLGPILPKKCCINPAHTIAKALLEAAIAKRAGIHEINSEALI

Sequences:

>Translated_209_residues
MKLILIGASGLVGQHVLQIALDDARIERVIAPTRQPLPTHPKLFAPIVSFDDLPANADWWSADALICTLGTTMKKAKFQA
AFKRVDYDYPLMAAKLAKQQGTETYVLNSAIGANVSSRFFYNQVKGELEQSLTQCHFTSLSFVRPGMIGGNRQESRPSER
LMMLTLMLLGPILPKKCCINPAHTIAKALLEAAIAKRAGIHEINSEALI
>Mature_209_residues
MKLILIGASGLVGQHVLQIALDDARIERVIAPTRQPLPTHPKLFAPIVSFDDLPANADWWSADALICTLGTTMKKAKFQA
AFKRVDYDYPLMAAKLAKQQGTETYVLNSAIGANVSSRFFYNQVKGELEQSLTQCHFTSLSFVRPGMIGGNRQESRPSER
LMMLTLMLLGPILPKKCCINPAHTIAKALLEAAIAKRAGIHEINSEALI

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To yeast YER004W [H]

Homologues:

Organism=Homo sapiens, GI148728172, Length=165, Percent_Identity=36.969696969697, Blast_Score=94, Evalue=6e-20,
Organism=Homo sapiens, GI148728168, Length=165, Percent_Identity=36.969696969697, Blast_Score=94, Evalue=6e-20,
Organism=Homo sapiens, GI148728164, Length=165, Percent_Identity=36.969696969697, Blast_Score=94, Evalue=6e-20,
Organism=Homo sapiens, GI148728166, Length=200, Percent_Identity=33.5, Blast_Score=94, Evalue=1e-19,
Organism=Escherichia coli, GI87082218, Length=170, Percent_Identity=35.2941176470588, Blast_Score=106, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI71983631, Length=209, Percent_Identity=33.4928229665072, Blast_Score=118, Evalue=3e-27,
Organism=Saccharomyces cerevisiae, GI6320840, Length=167, Percent_Identity=32.9341317365269, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000534 [H]

Pfam domain/function: PF01118 Semialdhyde_dh [H]

EC number: NA

Molecular weight: Translated: 22944; Mature: 22944

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLILIGASGLVGQHVLQIALDDARIERVIAPTRQPLPTHPKLFAPIVSFDDLPANADWW
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC
SADALICTLGTTMKKAKFQAAFKRVDYDYPLMAAKLAKQQGTETYVLNSAIGANVSSRFF
CCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCHHCCCHHHHHH
YNQVKGELEQSLTQCHFTSLSFVRPGMIGGNRQESRPSERLMMLTLMLLGPILPKKCCIN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCC
PAHTIAKALLEAAIAKRAGIHEINSEALI
HHHHHHHHHHHHHHHHHCCCHHCCCCCCC
>Mature Secondary Structure
MKLILIGASGLVGQHVLQIALDDARIERVIAPTRQPLPTHPKLFAPIVSFDDLPANADWW
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC
SADALICTLGTTMKKAKFQAAFKRVDYDYPLMAAKLAKQQGTETYVLNSAIGANVSSRFF
CCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCHHCCCHHHHHH
YNQVKGELEQSLTQCHFTSLSFVRPGMIGGNRQESRPSERLMMLTLMLLGPILPKKCCIN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCC
PAHTIAKALLEAAIAKRAGIHEINSEALI
HHHHHHHHHHHHHHHHHCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]