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The map label for this gene is ydjX [C]

Identifier: 126172870

GI number: 126172870

Start: 708224

End: 708886

Strand: Direct

Name: ydjX [C]

Synonym: Sbal_0621

Alternate gene names: 126172870

Gene position: 708224-708886 (Clockwise)

Preceding gene: 126172868

Following gene: 126172871

Centisome position: 13.81

GC content: 42.99

Gene sequence:

>663_bases
ATGATAGCAATACTGAATGAGTACTTTGTCACTCTGATTAACTGGGTCCAATCAGCTGGCTGGATAGGATTATTGAGTTA
CGGATTATTATTTATCATTGCAACGAGCCTGTTTGTTCCGGCCAGCTTAATGGCGGCAACGGCTGGTTTTTTATTTGGAC
CAGTTATTGGCAGCTTATTGATTTCATGTGTTGGCGTGTTAACCGCAGCCATAGGTTTTGCAATAGGCAGTCATGCCAAG
CATTCATGGGGATTAAGCCCTATGAAGAGCAGAGCTGGAATAAGGATCATCAAAGAGGCGATGGAAAAGCAGGCATTTCG
AAGTGTACTACTGCTGCGGTTATCGTCGGTTATTCCGTTTGCACCTATGAACTATGTATTAGGCGGCAGCAAGATAACCT
TTGGTCGTTTTGTGTTCGCTTCATGGTTAGGCATGTTCCCAGGCACAGTAGTTTATGTGTATATGGGATCGATATTACCC
AGCGTTAATCAGCTATTAGGCGATGACAACATCGCTTTAAAAAGTGCTCATCCCACTTTGTTTTGGACAGGATTTATCGT
ATCGGTTTTAGTGCTTGCACTGCTAGCAAGAACGGCCACTCAAGCCTTAAAACGTGATGCGATAGATGTTGAAAAACTTA
CCAATAATGTTAGCTCGAAGTAA

Upstream 100 bases:

>100_bases
GCTTCATTCACAGCATCTCGAATAAAAGTGTTGACACATTATATAGTGATCACTATATAATGGATATATATGTATCGATC
GATACACAATTAGAGTTGAG

Downstream 100 bases:

>100_bases
ACGTAATCGCGTAGTTCACATCATCCATACCAGCGACTCAGCGTGCTGATATGTTATCTAAGTAATACTCGGAGTTAGAA
AATGACAAATACAACTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MIAILNEYFVTLINWVQSAGWIGLLSYGLLFIIATSLFVPASLMAATAGFLFGPVIGSLLISCVGVLTAAIGFAIGSHAK
HSWGLSPMKSRAGIRIIKEAMEKQAFRSVLLLRLSSVIPFAPMNYVLGGSKITFGRFVFASWLGMFPGTVVYVYMGSILP
SVNQLLGDDNIALKSAHPTLFWTGFIVSVLVLALLARTATQALKRDAIDVEKLTNNVSSK

Sequences:

>Translated_220_residues
MIAILNEYFVTLINWVQSAGWIGLLSYGLLFIIATSLFVPASLMAATAGFLFGPVIGSLLISCVGVLTAAIGFAIGSHAK
HSWGLSPMKSRAGIRIIKEAMEKQAFRSVLLLRLSSVIPFAPMNYVLGGSKITFGRFVFASWLGMFPGTVVYVYMGSILP
SVNQLLGDDNIALKSAHPTLFWTGFIVSVLVLALLARTATQALKRDAIDVEKLTNNVSSK
>Mature_220_residues
MIAILNEYFVTLINWVQSAGWIGLLSYGLLFIIATSLFVPASLMAATAGFLFGPVIGSLLISCVGVLTAAIGFAIGSHAK
HSWGLSPMKSRAGIRIIKEAMEKQAFRSVLLLRLSSVIPFAPMNYVLGGSKITFGRFVFASWLGMFPGTVVYVYMGSILP
SVNQLLGDDNIALKSAHPTLFWTGFIVSVLVLALLARTATQALKRDAIDVEKLTNNVSSK

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI87081964, Length=144, Percent_Identity=29.1666666666667, Blast_Score=65, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21356469, Length=175, Percent_Identity=30.2857142857143, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23658; Mature: 23658

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAILNEYFVTLINWVQSAGWIGLLSYGLLFIIATSLFVPASLMAATAGFLFGPVIGSLL
CEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISCVGVLTAAIGFAIGSHAKHSWGLSPMKSRAGIRIIKEAMEKQAFRSVLLLRLSSVIPF
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APMNYVLGGSKITFGRFVFASWLGMFPGTVVYVYMGSILPSVNQLLGDDNIALKSAHPTL
CCHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHH
FWTGFIVSVLVLALLARTATQALKRDAIDVEKLTNNVSSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIAILNEYFVTLINWVQSAGWIGLLSYGLLFIIATSLFVPASLMAATAGFLFGPVIGSLL
CEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISCVGVLTAAIGFAIGSHAKHSWGLSPMKSRAGIRIIKEAMEKQAFRSVLLLRLSSVIPF
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APMNYVLGGSKITFGRFVFASWLGMFPGTVVYVYMGSILPSVNQLLGDDNIALKSAHPTL
CCHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHH
FWTGFIVSVLVLALLARTATQALKRDAIDVEKLTNNVSSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]