| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126172845
Identifier: 126172845
GI number: 126172845
Start: 679637
End: 680857
Strand: Direct
Name: 126172845
Synonym: Sbal_0596
Alternate gene names: NA
Gene position: 679637-680857 (Clockwise)
Preceding gene: 126172844
Following gene: 126172846
Centisome position: 13.26
GC content: 50.7
Gene sequence:
>1221_bases ATGAGCAGTAACTTACATCAGGCGGGTGTTAAGCTGCTCAAGCAGTTAGGTCGCCATGCTGACATCATTATGGACGCCTA TTTAGCGGGTTCCTTAAACGAGGATGCCCACGATCCAAGCGTGGTCGAAAAACTTAAACAGGCCGGTATTTTGTGGCGGC CAGAGCCAGATCAGGAGCTGCGGCTTAAGCGTTCTGTGCGTGCCTTGCTCGAAGAAGGTTTAAGTGACGAGCGTAATCGC CAAATCGACTCTAACGTCGGCTCGGCTCTCGCGACCATTAAAACCTTGGCCGACCATTACAAAGAAGCCCGTCACAGCTC AGATTACAGCGCTGCTGAAGCCTATTTGTCGGATTTGAGCGAGCATGTTTACAGCTTTGCCGACAGTCTGCGTTATTCGA TTCGTGTGCTCTGGGGCCGGATCAATAACGAGTTCGGTTATGTCGGTACGATCAACGCAAAGATCCGTGAAAATGAATTA GCCCAAAGCCAAGTGTCTGAATTGCTTAATGGCTTAGAGATGTTCCAGTTTAGTGAGCTAGGCGAAATCGCTGGCGATAT CCGTGAACTGCGCAAACTCTTAGTGACGACTTTGCAGGAAACCATGAGCGACTGCGCCCAGGAACTGAGCGTAGTGCAGG GGCGTTTACTCGAACTCTTAGGTCGCTTTAGGCAAATCCGTGGCCGTACCCGTTTGCTTAAGGGCTGGTTACTCTACACT GACTTGCATCCAGATTATCGGCCTGCGGACCATGTATCCCACAAGGAAATCCCGAGCCTATTCAATCGCGCCGAAATCTT GCTCGCGCCTGCTGCAGTAGACGTGCACAACGCCAGCCAAGAACTGGAGTTGATGGGCATAGTCGCGCACATTAAAGCTA TTAGTCGTCATCCCGTGATTGAAGCGGTGCGTGAGCGAGATGCGTCCGTGTCACTCACCCAAAGTGAAGACTTCGATGTA CCAGATAATCCACTCAAACAAGCGGTGGATGAGTATTTCGTCGATGTGATTGAGTCTGGCCTGCGTCAATCCGCGCTGGA ATATCTGGTGGATAAGGCATTGCCTTGGGAAGCCGAGAGCTGGATTTATCAAGTCATTGGCGGTTATGAAGGCCTACCCG ATGAACACAAAGCTTACTTTGAGCTTGAGCCTTTGGGTGAGCCGCATCCCATTTATAGCGGTAACTTTATCATTCGCGAT GTTGAGTTATGGCTAGCCTAG
Upstream 100 bases:
>100_bases CCTAAGCCTAGAAGCGCAGGCGGAAACGGCGACTCAGCGGGACTTAATCTAATGTTGGCACTGTTAAACCTAGGTAAAAG CTGCGACCAAGGAGGCCGTG
Downstream 100 bases:
>100_bases GCCGGCAACAACTGCAGCTGTTGGAGAAGGCTTTTATTAAGCGTTCTCCCAAGGTTAAGCTCACGGCTAACTGGCGCGCG ATTTACCGCGAGTTAGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MSSNLHQAGVKLLKQLGRHADIIMDAYLAGSLNEDAHDPSVVEKLKQAGILWRPEPDQELRLKRSVRALLEEGLSDERNR QIDSNVGSALATIKTLADHYKEARHSSDYSAAEAYLSDLSEHVYSFADSLRYSIRVLWGRINNEFGYVGTINAKIRENEL AQSQVSELLNGLEMFQFSELGEIAGDIRELRKLLVTTLQETMSDCAQELSVVQGRLLELLGRFRQIRGRTRLLKGWLLYT DLHPDYRPADHVSHKEIPSLFNRAEILLAPAAVDVHNASQELELMGIVAHIKAISRHPVIEAVRERDASVSLTQSEDFDV PDNPLKQAVDEYFVDVIESGLRQSALEYLVDKALPWEAESWIYQVIGGYEGLPDEHKAYFELEPLGEPHPIYSGNFIIRD VELWLA
Sequences:
>Translated_406_residues MSSNLHQAGVKLLKQLGRHADIIMDAYLAGSLNEDAHDPSVVEKLKQAGILWRPEPDQELRLKRSVRALLEEGLSDERNR QIDSNVGSALATIKTLADHYKEARHSSDYSAAEAYLSDLSEHVYSFADSLRYSIRVLWGRINNEFGYVGTINAKIRENEL AQSQVSELLNGLEMFQFSELGEIAGDIRELRKLLVTTLQETMSDCAQELSVVQGRLLELLGRFRQIRGRTRLLKGWLLYT DLHPDYRPADHVSHKEIPSLFNRAEILLAPAAVDVHNASQELELMGIVAHIKAISRHPVIEAVRERDASVSLTQSEDFDV PDNPLKQAVDEYFVDVIESGLRQSALEYLVDKALPWEAESWIYQVIGGYEGLPDEHKAYFELEPLGEPHPIYSGNFIIRD VELWLA >Mature_405_residues SSNLHQAGVKLLKQLGRHADIIMDAYLAGSLNEDAHDPSVVEKLKQAGILWRPEPDQELRLKRSVRALLEEGLSDERNRQ IDSNVGSALATIKTLADHYKEARHSSDYSAAEAYLSDLSEHVYSFADSLRYSIRVLWGRINNEFGYVGTINAKIRENELA QSQVSELLNGLEMFQFSELGEIAGDIRELRKLLVTTLQETMSDCAQELSVVQGRLLELLGRFRQIRGRTRLLKGWLLYTD LHPDYRPADHVSHKEIPSLFNRAEILLAPAAVDVHNASQELELMGIVAHIKAISRHPVIEAVRERDASVSLTQSEDFDVP DNPLKQAVDEYFVDVIESGLRQSALEYLVDKALPWEAESWIYQVIGGYEGLPDEHKAYFELEPLGEPHPIYSGNFIIRDV ELWLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45920; Mature: 45789
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNLHQAGVKLLKQLGRHADIIMDAYLAGSLNEDAHDPSVVEKLKQAGILWRPEPDQEL CCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHH RLKRSVRALLEEGLSDERNRQIDSNVGSALATIKTLADHYKEARHSSDYSAAEAYLSDLS HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH EHVYSFADSLRYSIRVLWGRINNEFGYVGTINAKIRENELAQSQVSELLNGLEMFQFSEL HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH GEIAGDIRELRKLLVTTLQETMSDCAQELSVVQGRLLELLGRFRQIRGRTRLLKGWLLYT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE DLHPDYRPADHVSHKEIPSLFNRAEILLAPAAVDVHNASQELELMGIVAHIKAISRHPVI ECCCCCCCCCCCCHHHHHHHHCCHHHEEECCHHHHHCCHHHHHHHHHHHHHHHHHCCHHH EAVRERDASVSLTQSEDFDVPDNPLKQAVDEYFVDVIESGLRQSALEYLVDKALPWEAES HHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH WIYQVIGGYEGLPDEHKAYFELEPLGEPHPIYSGNFIIRDVELWLA HHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEHHHHCC >Mature Secondary Structure SSNLHQAGVKLLKQLGRHADIIMDAYLAGSLNEDAHDPSVVEKLKQAGILWRPEPDQEL CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHH RLKRSVRALLEEGLSDERNRQIDSNVGSALATIKTLADHYKEARHSSDYSAAEAYLSDLS HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH EHVYSFADSLRYSIRVLWGRINNEFGYVGTINAKIRENELAQSQVSELLNGLEMFQFSEL HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH GEIAGDIRELRKLLVTTLQETMSDCAQELSVVQGRLLELLGRFRQIRGRTRLLKGWLLYT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE DLHPDYRPADHVSHKEIPSLFNRAEILLAPAAVDVHNASQELELMGIVAHIKAISRHPVI ECCCCCCCCCCCCHHHHHHHHCCHHHEEECCHHHHHCCHHHHHHHHHHHHHHHHHCCHHH EAVRERDASVSLTQSEDFDVPDNPLKQAVDEYFVDVIESGLRQSALEYLVDKALPWEAES HHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH WIYQVIGGYEGLPDEHKAYFELEPLGEPHPIYSGNFIIRDVELWLA HHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA