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The map label for this gene is yaaJ [C]

Identifier: 126172747

GI number: 126172747

Start: 562023

End: 563399

Strand: Direct

Name: yaaJ [C]

Synonym: Sbal_0498

Alternate gene names: 126172747

Gene position: 562023-563399 (Clockwise)

Preceding gene: 126172746

Following gene: 126172749

Centisome position: 10.96

GC content: 50.11

Gene sequence:

>1377_bases
ATGGAAGCGATTACGGAGTTTGTTGGCCTGATTAATGGCTTTGTCTGGGGCACACCTATGTTGGTGATGATCTTAGGCGT
TGGTTTGTTTCTTTCCCTCGGGCTGAGATTAATGCCCATTCTGAAGTTAGGCACAGGCTTTAAGTTACTCTGGTCTGGCC
GTATTCCTGACAAAGATAAAAATGTGAAAGGGGATGTGAGTCCGTTTAATGCGCTGATGACTTCCCTTTCAGCTACTATT
GGTACGGGTAATATCGCGGGCGTGGCGACGGCGATTTTTGTCGGTGGCCCAGGCGCGTTATTCTGGATGTGGTGCACCGC
ATTAGTGGGCATGGCGACTAAGTATTCTGAGGCCGTGCTGGCGGTTAAATTCCGTGAAGTGGACGATCAGGGAAACCATG
TCGGTGGCCCTATGTATTACATTAAAAATGGTCTCGGTAAAAAGTGGGCTTGGTTGGGCACACTGTTTGCGATTTTTGGA
TCACTTGCTGGCTTTGGTATTGGCAACACAGTACAAGCCAACTCAGTGGCAGCAGCATTAAGCAGTAACTTCGGCGTTCC
GGCTTGGGTGTCTGGCGTGGTGATGATGCTGCTCGTGGGCGCGGTATTGATGGGGGGCATTAAGCGTATCGCTGAAGTCG
CCGGTAAGTTAGTGCCATTTATGACGATTTTTTATATTACTGCTGGCCTAGGTGTGTTGGTGGTGCATATTCAAGACGTA
CCAGCGGCGTTCGCCCTAATTATTCACAGCGCTTTTAATCCAGTGGCAGCCCAAGGTGGTTTTGCAGGTGCAGCTGTGTG
GGCGGCGATTCGTTTTGGTGTGGCGCGCGGCGTATTCTCCAACGAAGCGGGTTTAGGTAGTGCGCCGATAGCCCATGCTG
CGGCACAAACCAATAATCCTGTGGCGCAAGGGCTGGTGGCTATGCTCGGCACTTTTATCGATACTATTGTGGTCTGCTCG
ATTACAGGGCTGGCAATTGTGGTTTCAGGCTCTTGGACCTCGGGCGAAAATGGCGCCGCGCTGACGTCATACGCTTTCTC
CCATGCCTTGCCTCTGGGTAATTATATCGTGGCTATCGCCTTGTCTATCTTTGCCTTCACCACCATTATTGGTTGGAGCT
TCTACAGCGAAAAATGTGTGCAGTATCTCTTTGGTATCAAAGCGGTAAAACCTTTTAGGTTGCTATGGACCATTGCCGTG
CCACTAGGCGCGGTGAGTTCATTGGATTTTATCTGGCTATTGGCTGATACCTTAAACGCCATGATGGCCATTCCTAACTT
AATCGCCTTGGCACTGTTAAGCCCTGTGGTCTTTGGGTTAACGCGGGAATACTTCATTAAAAAGCGTGCCGATGAAGCAG
CAAAGGCCCAATCTTAA

Upstream 100 bases:

>100_bases
CTGTTAGATTGGCTCCTTGATATGTCGTGTTCGTTAGGCCAACTCCTAATCCGACGGCGTCAGTCAAACTATAACAATAA
CAAGCAATCACGAGGTTTGA

Downstream 100 bases:

>100_bases
TCTGATGAATAAAGTTGAGTCACGTTAGAATAAAAAAGCTCACCTAGTTGTGAGCTTTTTTCATTTAAATCAATAATATT
TATGTATTAATCCGAGTTGT

Product: amino acid carrier protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MEAITEFVGLINGFVWGTPMLVMILGVGLFLSLGLRLMPILKLGTGFKLLWSGRIPDKDKNVKGDVSPFNALMTSLSATI
GTGNIAGVATAIFVGGPGALFWMWCTALVGMATKYSEAVLAVKFREVDDQGNHVGGPMYYIKNGLGKKWAWLGTLFAIFG
SLAGFGIGNTVQANSVAAALSSNFGVPAWVSGVVMMLLVGAVLMGGIKRIAEVAGKLVPFMTIFYITAGLGVLVVHIQDV
PAAFALIIHSAFNPVAAQGGFAGAAVWAAIRFGVARGVFSNEAGLGSAPIAHAAAQTNNPVAQGLVAMLGTFIDTIVVCS
ITGLAIVVSGSWTSGENGAALTSYAFSHALPLGNYIVAIALSIFAFTTIIGWSFYSEKCVQYLFGIKAVKPFRLLWTIAV
PLGAVSSLDFIWLLADTLNAMMAIPNLIALALLSPVVFGLTREYFIKKRADEAAKAQS

Sequences:

>Translated_458_residues
MEAITEFVGLINGFVWGTPMLVMILGVGLFLSLGLRLMPILKLGTGFKLLWSGRIPDKDKNVKGDVSPFNALMTSLSATI
GTGNIAGVATAIFVGGPGALFWMWCTALVGMATKYSEAVLAVKFREVDDQGNHVGGPMYYIKNGLGKKWAWLGTLFAIFG
SLAGFGIGNTVQANSVAAALSSNFGVPAWVSGVVMMLLVGAVLMGGIKRIAEVAGKLVPFMTIFYITAGLGVLVVHIQDV
PAAFALIIHSAFNPVAAQGGFAGAAVWAAIRFGVARGVFSNEAGLGSAPIAHAAAQTNNPVAQGLVAMLGTFIDTIVVCS
ITGLAIVVSGSWTSGENGAALTSYAFSHALPLGNYIVAIALSIFAFTTIIGWSFYSEKCVQYLFGIKAVKPFRLLWTIAV
PLGAVSSLDFIWLLADTLNAMMAIPNLIALALLSPVVFGLTREYFIKKRADEAAKAQS
>Mature_458_residues
MEAITEFVGLINGFVWGTPMLVMILGVGLFLSLGLRLMPILKLGTGFKLLWSGRIPDKDKNVKGDVSPFNALMTSLSATI
GTGNIAGVATAIFVGGPGALFWMWCTALVGMATKYSEAVLAVKFREVDDQGNHVGGPMYYIKNGLGKKWAWLGTLFAIFG
SLAGFGIGNTVQANSVAAALSSNFGVPAWVSGVVMMLLVGAVLMGGIKRIAEVAGKLVPFMTIFYITAGLGVLVVHIQDV
PAAFALIIHSAFNPVAAQGGFAGAAVWAAIRFGVARGVFSNEAGLGSAPIAHAAAQTNNPVAQGLVAMLGTFIDTIVVCS
ITGLAIVVSGSWTSGENGAALTSYAFSHALPLGNYIVAIALSIFAFTTIIGWSFYSEKCVQYLFGIKAVKPFRLLWTIAV
PLGAVSSLDFIWLLADTLNAMMAIPNLIALALLSPVVFGLTREYFIKKRADEAAKAQS

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=454, Percent_Identity=35.6828193832599, Blast_Score=232, Evalue=4e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 47983; Mature: 47983

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAITEFVGLINGFVWGTPMLVMILGVGLFLSLGLRLMPILKLGTGFKLLWSGRIPDKDK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
NVKGDVSPFNALMTSLSATIGTGNIAGVATAIFVGGPGALFWMWCTALVGMATKYSEAVL
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHH
AVKFREVDDQGNHVGGPMYYIKNGLGKKWAWLGTLFAIFGSLAGFGIGNTVQANSVAAAL
EEEEECCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
SSNFGVPAWVSGVVMMLLVGAVLMGGIKRIAEVAGKLVPFMTIFYITAGLGVLVVHIQDV
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEEHHH
PAAFALIIHSAFNPVAAQGGFAGAAVWAAIRFGVARGVFSNEAGLGSAPIAHAAAQTNNP
HHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCH
VAQGLVAMLGTFIDTIVVCSITGLAIVVSGSWTSGENGAALTSYAFSHALPLGNYIVAIA
HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH
LSIFAFTTIIGWSFYSEKCVQYLFGIKAVKPFRLLWTIAVPLGAVSSLDFIWLLADTLNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MMAIPNLIALALLSPVVFGLTREYFIKKRADEAAKAQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEAITEFVGLINGFVWGTPMLVMILGVGLFLSLGLRLMPILKLGTGFKLLWSGRIPDKDK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
NVKGDVSPFNALMTSLSATIGTGNIAGVATAIFVGGPGALFWMWCTALVGMATKYSEAVL
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHH
AVKFREVDDQGNHVGGPMYYIKNGLGKKWAWLGTLFAIFGSLAGFGIGNTVQANSVAAAL
EEEEECCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
SSNFGVPAWVSGVVMMLLVGAVLMGGIKRIAEVAGKLVPFMTIFYITAGLGVLVVHIQDV
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEEHHH
PAAFALIIHSAFNPVAAQGGFAGAAVWAAIRFGVARGVFSNEAGLGSAPIAHAAAQTNNP
HHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCH
VAQGLVAMLGTFIDTIVVCSITGLAIVVSGSWTSGENGAALTSYAFSHALPLGNYIVAIA
HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH
LSIFAFTTIIGWSFYSEKCVQYLFGIKAVKPFRLLWTIAVPLGAVSSLDFIWLLADTLNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MMAIPNLIALALLSPVVFGLTREYFIKKRADEAAKAQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]