| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126172745
Identifier: 126172745
GI number: 126172745
Start: 558013
End: 559281
Strand: Direct
Name: 126172745
Synonym: Sbal_0495
Alternate gene names: NA
Gene position: 558013-559281 (Clockwise)
Preceding gene: 126172744
Following gene: 126172746
Centisome position: 10.88
GC content: 49.65
Gene sequence:
>1269_bases TTGTTTGCCGCCAAGCCATTTGAACAACTGATGCAATTGCCCGCTGCCGTGCGGCAATATTTGCTGATCACCTTCAATTA TTGGAGTTTTACCTTAACCGACGGCGCACTGCGGATGTTAGTAGTGCTGCATTTTCACGATCTTGGCTACAGTCCGCTTG CGATCGCTATGCTGTTTTTGTTCTACGAGATTTTTGGCGTAGTGACCAATCTGATTGGCGGCTGGCTAGGGGCGCGTTTA GGGTTAAATCGCACCATGAACTTGGGCCTTGGCATGCAAGTGTTTGCCTTAGCCATGTTGTTAGTGCCGGCGGCGAGTTT ACCTTTGTGGCTTGCAGGCGTGCCTTGGGTGATGGCGGCGCAGGCTTTATCTGGGATCGCTAAAGATCTCAATAAGATGA GTGCCAAAAGCGCGATAAAACTGCTGGTGCCAAAAGGCGAGCAGGGCAAGCTTTACAAATGGGTTGCCCTATTAACGGGT TCTAAAAATGCCCTCAAGGGCGCGGGATTTTTCCTCGGCGGCGCCTTGCTTGCTTTACTCGGGTTTGAGTTGGCGATCGC TACTATGGCTCTCATGCTTGGACTCGTCTGGTTACTCAGTTTAGTGATGCTGAAAAAGGATTTAGGTAAAGCCAAGAATA AGCCCAAATTTACGGAGATTTTCTCTAAGAGTCGTAGCGTGAACATTCTCTCGGCGGCGCGATTATTCCTATTTGCTGCC AGAGATGTGTGGTTTGTGGTGGCGTTACCCGTGTATCTGGCCAGCCAATTAGGCTGGGATCATTGGGCTGTGGGCGGCTT TTTAGCTGTGTGGGTTATCGGTTACGGCATAGTGCAAACCCTAGCACCTAAGATCACGGGCAATCGCCAAGCTAAAAGTC AGCTTATTGATTCAGCCCCCGATGGTCGCAGCGCGTTAATTTGGGCCAGTATGTTGGCCTTTGTGCCAGCGCTGATTGCC TGCTCGATACAGTTTAGTTTTTATCCCGAGGCCAGTTTGTTGTTGGGTCTAATGTTATTTGGTGCCCTGTTTGCGGTGAA CTCATCGCTGCACAGTTACTTGATTGTGAGTTACGCCAGTGAAGATGCGGTGTCGCTGGATGTGGGTTTCTACTATATGG CCAATGCTATGGGGCGTTTAGTCGGCACTGTGCTGTCTGGCTTAGTGTATCAAGCCTATGGTTTAGCTGCCTGTTTGTGG ATTTCGACCGCTTTTATCGGCATCACTGCTATGATTTCGATTAAGTTACCTCGGCAAGTTGCGGAATAA
Upstream 100 bases:
>100_bases CTCTATGTGTGGTACGACAATGAATGGGGCTACGCCAATCGCACCGCTGAGCTTGCCCGTTTAGTCGGCCAGCTTGATTT TCCGCGCTAGGAGAGCTCAA
Downstream 100 bases:
>100_bases GTGCCAATGCAAAAGCGCTTCAAGGCATCAACATACTACTTCAACAGGTTAATGTTACCTGTGCGTCTGCGGTGTTTAGG ATGCAGTGGGTGTTTTATCC
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; Facilitator Superfamily Multidrug-Efflux Transporter; Membrane Transporter; Facilitator Superfamily Transporter; Multidrug Efflux Transporter MFS Family; MFS Transporter; Transporter-Like Protein; Permease Of Facilitator Superfamily; Multidrug-Efflux Transporter; Nonfunctional Facilitator Superfamily Protein; Nitric Oxide Reductase Cytochrome B Subunit
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MFAAKPFEQLMQLPAAVRQYLLITFNYWSFTLTDGALRMLVVLHFHDLGYSPLAIAMLFLFYEIFGVVTNLIGGWLGARL GLNRTMNLGLGMQVFALAMLLVPAASLPLWLAGVPWVMAAQALSGIAKDLNKMSAKSAIKLLVPKGEQGKLYKWVALLTG SKNALKGAGFFLGGALLALLGFELAIATMALMLGLVWLLSLVMLKKDLGKAKNKPKFTEIFSKSRSVNILSAARLFLFAA RDVWFVVALPVYLASQLGWDHWAVGGFLAVWVIGYGIVQTLAPKITGNRQAKSQLIDSAPDGRSALIWASMLAFVPALIA CSIQFSFYPEASLLLGLMLFGALFAVNSSLHSYLIVSYASEDAVSLDVGFYYMANAMGRLVGTVLSGLVYQAYGLAACLW ISTAFIGITAMISIKLPRQVAE
Sequences:
>Translated_422_residues MFAAKPFEQLMQLPAAVRQYLLITFNYWSFTLTDGALRMLVVLHFHDLGYSPLAIAMLFLFYEIFGVVTNLIGGWLGARL GLNRTMNLGLGMQVFALAMLLVPAASLPLWLAGVPWVMAAQALSGIAKDLNKMSAKSAIKLLVPKGEQGKLYKWVALLTG SKNALKGAGFFLGGALLALLGFELAIATMALMLGLVWLLSLVMLKKDLGKAKNKPKFTEIFSKSRSVNILSAARLFLFAA RDVWFVVALPVYLASQLGWDHWAVGGFLAVWVIGYGIVQTLAPKITGNRQAKSQLIDSAPDGRSALIWASMLAFVPALIA CSIQFSFYPEASLLLGLMLFGALFAVNSSLHSYLIVSYASEDAVSLDVGFYYMANAMGRLVGTVLSGLVYQAYGLAACLW ISTAFIGITAMISIKLPRQVAE >Mature_422_residues MFAAKPFEQLMQLPAAVRQYLLITFNYWSFTLTDGALRMLVVLHFHDLGYSPLAIAMLFLFYEIFGVVTNLIGGWLGARL GLNRTMNLGLGMQVFALAMLLVPAASLPLWLAGVPWVMAAQALSGIAKDLNKMSAKSAIKLLVPKGEQGKLYKWVALLTG SKNALKGAGFFLGGALLALLGFELAIATMALMLGLVWLLSLVMLKKDLGKAKNKPKFTEIFSKSRSVNILSAARLFLFAA RDVWFVVALPVYLASQLGWDHWAVGGFLAVWVIGYGIVQTLAPKITGNRQAKSQLIDSAPDGRSALIWASMLAFVPALIA CSIQFSFYPEASLLLGLMLFGALFAVNSSLHSYLIVSYASEDAVSLDVGFYYMANAMGRLVGTVLSGLVYQAYGLAACLW ISTAFIGITAMISIKLPRQVAE
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45716; Mature: 45716
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAAKPFEQLMQLPAAVRQYLLITFNYWSFTLTDGALRMLVVLHFHDLGYSPLAIAMLFL CCCCCHHHHHHHHHHHHHHHHEEEEECEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHH FYEIFGVVTNLIGGWLGARLGLNRTMNLGLGMQVFALAMLLVPAASLPLWLAGVPWVMAA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHH QALSGIAKDLNKMSAKSAIKLLVPKGEQGKLYKWVALLTGSKNALKGAGFFLGGALLALL HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHH GFELAIATMALMLGLVWLLSLVMLKKDLGKAKNKPKFTEIFSKSRSVNILSAARLFLFAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHH RDVWFVVALPVYLASQLGWDHWAVGGFLAVWVIGYGIVQTLAPKITGNRQAKSQLIDSAP HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC DGRSALIWASMLAFVPALIACSIQFSFYPEASLLLGLMLFGALFAVNSSLHSYLIVSYAS CCCHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECC EDAVSLDVGFYYMANAMGRLVGTVLSGLVYQAYGLAACLWISTAFIGITAMISIKLPRQV CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHH AE CC >Mature Secondary Structure MFAAKPFEQLMQLPAAVRQYLLITFNYWSFTLTDGALRMLVVLHFHDLGYSPLAIAMLFL CCCCCHHHHHHHHHHHHHHHHEEEEECEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHH FYEIFGVVTNLIGGWLGARLGLNRTMNLGLGMQVFALAMLLVPAASLPLWLAGVPWVMAA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHH QALSGIAKDLNKMSAKSAIKLLVPKGEQGKLYKWVALLTGSKNALKGAGFFLGGALLALL HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHH GFELAIATMALMLGLVWLLSLVMLKKDLGKAKNKPKFTEIFSKSRSVNILSAARLFLFAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHH RDVWFVVALPVYLASQLGWDHWAVGGFLAVWVIGYGIVQTLAPKITGNRQAKSQLIDSAP HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC DGRSALIWASMLAFVPALIACSIQFSFYPEASLLLGLMLFGALFAVNSSLHSYLIVSYAS CCCHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECC EDAVSLDVGFYYMANAMGRLVGTVLSGLVYQAYGLAACLWISTAFIGITAMISIKLPRQV CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHH AE CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA