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The map label for this gene is phnA [H]

Identifier: 125625277

GI number: 125625277

Start: 2481512

End: 2481877

Strand: Reverse

Name: phnA [H]

Synonym: llmg_2524

Alternate gene names: 125625277

Gene position: 2481877-2481512 (Counterclockwise)

Preceding gene: 125625278

Following gene: 125625276

Centisome position: 98.12

GC content: 34.7

Gene sequence:

>366_bases
GTGGAGTGCTTATATATCAAGGGTCTAAGCTCTTTATATATTCATTGCTCAAGTGAATATACTTATGAATTATCAGATAC
GAGCTTTGGCTGTTCTGAATGTGGGAATGAATTTACGCTTGAAGAAATTGAAGCAGCTGGAAAATTTATTGTCCTTGATA
GTCTAGGAAATGAGTTAGAAACTGGGGATGATCTTGTCATTGTACAAGATTTGCCGGTTAAAGGAATGCCAAAACCAATT
AAACAGGGTACAAAAGTGAAAAACATTCGTATCAATCCAGAAGGAAAAAATGAACATTTTATTGATTCAAAAATTCCAGG
ATTTGGAGCGATTAGTCTGAAGGGTTCGGTTGTTAAAAAAGCATAA

Upstream 100 bases:

>100_bases
AAAGAAAAAGAGACCGCTGAAAAGTTCGGCGACATCTTAAAAGCATTATGATTTTTTGGTCGAACGTATTAAAAAGCGTA
AAAAAATAGCGTTGTTTTCT

Downstream 100 bases:

>100_bases
AAAGTAATCAGAAAATTTTCTGATTATTTTTTTTACTGACAGAGTATCTATCAGCAAAATTTACTGATAAAATACTCTGT
CAGTAAATTATATTTGATTT

Product: putative alkylphosphonate uptake protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MECLYIKGLSSLYIHCSSEYTYELSDTSFGCSECGNEFTLEEIEAAGKFIVLDSLGNELETGDDLVIVQDLPVKGMPKPI
KQGTKVKNIRINPEGKNEHFIDSKIPGFGAISLKGSVVKKA

Sequences:

>Translated_121_residues
MECLYIKGLSSLYIHCSSEYTYELSDTSFGCSECGNEFTLEEIEAAGKFIVLDSLGNELETGDDLVIVQDLPVKGMPKPI
KQGTKVKNIRINPEGKNEHFIDSKIPGFGAISLKGSVVKKA
>Mature_121_residues
MECLYIKGLSSLYIHCSSEYTYELSDTSFGCSECGNEFTLEEIEAAGKFIVLDSLGNELETGDDLVIVQDLPVKGMPKPI
KQGTKVKNIRINPEGKNEHFIDSKIPGFGAISLKGSVVKKA

Specific function: Unknown

COG id: COG2824

COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790547, Length=106, Percent_Identity=47.1698113207547, Blast_Score=79, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004624
- InterPro:   IPR013988
- InterPro:   IPR013987 [H]

Pfam domain/function: PF03831 PhnA; PF08274 PhnA_Zn_Ribbon [H]

EC number: NA

Molecular weight: Translated: 13218; Mature: 13218

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECLYIKGLSSLYIHCSSEYTYELSDTSFGCSECGNEFTLEEIEAAGKFIVLDSLGNELE
CCEEEEECCCEEEEEECCCEEEEECCCCCCHHHCCCCCCHHHHHHCCCEEEEECCCCCCC
TGDDLVIVQDLPVKGMPKPIKQGTKVKNIRINPEGKNEHFIDSKIPGFGAISLKGSVVKK
CCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCEEEEECCEEEEC
A
C
>Mature Secondary Structure
MECLYIKGLSSLYIHCSSEYTYELSDTSFGCSECGNEFTLEEIEAAGKFIVLDSLGNELE
CCEEEEECCCEEEEEECCCEEEEECCCCCCHHHCCCCCCHHHHHHCCCEEEEECCCCCCC
TGDDLVIVQDLPVKGMPKPIKQGTKVKNIRINPEGKNEHFIDSKIPGFGAISLKGSVVKK
CCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCEEEEECCEEEEC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12397186; 1322373 [H]