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The map label for this gene is ssbB [H]

Identifier: 125625230

GI number: 125625230

Start: 2431325

End: 2431825

Strand: Reverse

Name: ssbB [H]

Synonym: llmg_2474

Alternate gene names: 125625230

Gene position: 2431825-2431325 (Counterclockwise)

Preceding gene: 125625231

Following gene: 125625229

Centisome position: 96.14

GC content: 41.72

Gene sequence:

>501_bases
ATGATTAACAATGTTGTATTAGTGGGACGCATTACTCGCGATCCTGAACTTCGTTACACCCCTCAAAATCAAGCTGTTGC
AACTTTTTCATTGGCTGTAAATCGTCAATTTAAAAATGCTAACGGTGAACGTGAGGCTGATTTCATTAACTGCGTTATTT
GGCGCCAACAAGCTGAAAATTTGGCAAATTGGGCTAAAAAAGGAGCTTTGATCGGTGTAACTGGTCGAATTCAAACACGT
AATTATGAAAATCAACAAGGTCAACGCGTTTATGTGACTGAGGTTGTGGCTGATAGTTTCCAAATGTTGGAAAGTAGATC
TGCTCGCGATGGTATGGGAGGCGGAGCTTCTGCCGGTTCATATTCTGCACCAAGCCAATCTACAAATAATACTCCACGTC
CACAAACGAATAATAATAGTGCAACACCGAATTTCGGTCGTGATGCTGACCCATTTGGTAGCTCACCTATGGAAATCTCG
GATGATGATCTTCCATTCTAA

Upstream 100 bases:

>100_bases
GCGAATTTGACCGTCTTGCTAAGATCAACCTTGACATTCTTCGTCATATGATCGTTAAAGTTGAAGCTTAAGAGCTTTTA
TTTCTAAGGAGAAGTTCATT

Downstream 100 bases:

>100_bases
TAGGGCGAAATAATTGACGCTAAAGCGCCTAATTATTTCACGGAAACCGCTATGGCGGATTTCCTAGTCCTCTTACTAGT
TATTATGAAAAGCAGAATCG

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB 2; Helix-destabilizing protein 2 [H]

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MINNVVLVGRITRDPELRYTPQNQAVATFSLAVNRQFKNANGEREADFINCVIWRQQAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADSFQMLESRSARDGMGGGASAGSYSAPSQSTNNTPRPQTNNNSATPNFGRDADPFGSSPMEIS
DDDLPF

Sequences:

>Translated_166_residues
MINNVVLVGRITRDPELRYTPQNQAVATFSLAVNRQFKNANGEREADFINCVIWRQQAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADSFQMLESRSARDGMGGGASAGSYSAPSQSTNNTPRPQTNNNSATPNFGRDADPFGSSPMEIS
DDDLPF
>Mature_166_residues
MINNVVLVGRITRDPELRYTPQNQAVATFSLAVNRQFKNANGEREADFINCVIWRQQAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADSFQMLESRSARDGMGGGASAGSYSAPSQSTNNTPRPQTNNNSATPNFGRDADPFGSSPMEIS
DDDLPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=178, Percent_Identity=32.5842696629214, Blast_Score=76, Evalue=1e-15,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18233; Mature: 18233

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINNVVLVGRITRDPELRYTPQNQAVATFSLAVNRQFKNANGEREADFINCVIWRQQAEN
CCCCEEEEEEECCCCCEEECCCCCEEEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHH
LANWAKKGALIGVTGRIQTRNYENQQGQRVYVTEVVADSFQMLESRSARDGMGGGASAGS
HHHHHHCCCEEEEECEEEECCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCC
YSAPSQSTNNTPRPQTNNNSATPNFGRDADPFGSSPMEISDDDLPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MINNVVLVGRITRDPELRYTPQNQAVATFSLAVNRQFKNANGEREADFINCVIWRQQAEN
CCCCEEEEEEECCCCCEEECCCCCEEEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHH
LANWAKKGALIGVTGRIQTRNYENQQGQRVYVTEVVADSFQMLESRSARDGMGGGASAGS
HHHHHHCCCEEEEECEEEECCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCC
YSAPSQSTNNTPRPQTNNNSATPNFGRDADPFGSSPMEISDDDLPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]