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The map label for this gene is ylbH [H]

Identifier: 125625201

GI number: 125625201

Start: 2395400

End: 2395939

Strand: Reverse

Name: ylbH [H]

Synonym: llmg_2444

Alternate gene names: 125625201

Gene position: 2395939-2395400 (Counterclockwise)

Preceding gene: 125625202

Following gene: 125625200

Centisome position: 94.72

GC content: 36.11

Gene sequence:

>540_bases
ATGAGAGTAGTTTCAGGAAATTATGGCGGAAGACCGCTGAAGACATTGGCAGGAAAAACAACAAGACCAACCACAGATAA
AGTCAAGGGAGCTATTTTTAATATGATTGGTCCTTATTTCGACGGAGGTCGTGTTCTTGATTTATTTGCAGGGTCAGGAA
GTTTGGCAATTGAAGCCGTCTCAAGAGGAATGGATCATGCCCTTCTTGTTGAAAAAGACCGAGCAGCTCAACAAGTCATT
TTGGAAAATATCAAGATGACGAAAGAGCCTGAGAAATTTCAATTATTAAAAATGTCAGCAGAGCGTGTTTTGACAAATCT
GTCTGAAAGTTTTGATTTAGTTTTGTTGGATCCACCCTACGCTAAAGAACAAATTGTTGAAAACTTAGAACTTTTGCAAG
AAAAAAATTTACTGACAGAAAAGGTAATTGTTGTCTGTGAAACAGACAAGGAAGTTGAACTTCCTGACAAAATTGGGAAA
TTAGAGTTGACTAGGCAAAAAACTTATGGAATTTCTAAAATATCAATTTATGAATTTTGA

Upstream 100 bases:

>100_bases
GTAATAATAAGAAAGAAAATTTTTACTGACAGAACGATTGGAACAAGCCTGACAGGGCGATTCGGCTCTTCATTTAAACT
TTTGTGATATAATTATTTTC

Downstream 100 bases:

>100_bases
CATTTACTGACAGAAATTCTGTCAGTAAATTAAGAAAGAAAAAAGTAATGACAGAAAAAATTGGACTCTTTACAGGAACT
TTTGATCCACTGACAAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MRVVSGNYGGRPLKTLAGKTTRPTTDKVKGAIFNMIGPYFDGGRVLDLFAGSGSLAIEAVSRGMDHALLVEKDRAAQQVI
LENIKMTKEPEKFQLLKMSAERVLTNLSESFDLVLLDPPYAKEQIVENLELLQEKNLLTEKVIVVCETDKEVELPDKIGK
LELTRQKTYGISKISIYEF

Sequences:

>Translated_179_residues
MRVVSGNYGGRPLKTLAGKTTRPTTDKVKGAIFNMIGPYFDGGRVLDLFAGSGSLAIEAVSRGMDHALLVEKDRAAQQVI
LENIKMTKEPEKFQLLKMSAERVLTNLSESFDLVLLDPPYAKEQIVENLELLQEKNLLTEKVIVVCETDKEVELPDKIGK
LELTRQKTYGISKISIYEF
>Mature_179_residues
MRVVSGNYGGRPLKTLAGKTTRPTTDKVKGAIFNMIGPYFDGGRVLDLFAGSGSLAIEAVSRGMDHALLVEKDRAAQQVI
LENIKMTKEPEKFQLLKMSAERVLTNLSESFDLVLLDPPYAKEQIVENLELLQEKNLLTEKVIVVCETDKEVELPDKIGK
LELTRQKTYGISKISIYEF

Specific function: May catalyze the S-adenosyl-L-methionine-dependent methylation of a specific base in rRNA (Potential) [H]

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]

Homologues:

Organism=Escherichia coli, GI1789875, Length=178, Percent_Identity=30.3370786516854, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 19990; Mature: 19990

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVSGNYGGRPLKTLAGKTTRPTTDKVKGAIFNMIGPYFDGGRVLDLFAGSGSLAIEAV
CEEECCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEHHHH
SRGMDHALLVEKDRAAQQVILENIKMTKEPEKFQLLKMSAERVLTNLSESFDLVLLDPPY
HCCCCCEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCC
AKEQIVENLELLQEKNLLTEKVIVVCETDKEVELPDKIGKLELTRQKTYGISKISIYEF
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEEHHHHCCCCEEEEEEC
>Mature Secondary Structure
MRVVSGNYGGRPLKTLAGKTTRPTTDKVKGAIFNMIGPYFDGGRVLDLFAGSGSLAIEAV
CEEECCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEHHHH
SRGMDHALLVEKDRAAQQVILENIKMTKEPEKFQLLKMSAERVLTNLSESFDLVLLDPPY
HCCCCCEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCC
AKEQIVENLELLQEKNLLTEKVIVVCETDKEVELPDKIGKLELTRQKTYGISKISIYEF
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEEHHHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]