Click here to switch to the map view.

The map label for this gene is comGB [H]

Identifier: 125625166

GI number: 125625166

Start: 2345332

End: 2346420

Strand: Reverse

Name: comGB [H]

Synonym: llmg_2407

Alternate gene names: 125625166

Gene position: 2346420-2345332 (Counterclockwise)

Preceding gene: 125625167

Following gene: 125625165

Centisome position: 92.76

GC content: 32.42

Gene sequence:

>1089_bases
TTGCGAAAAGTAAATTTGACACTTGGTCGCCGAAAAAATGGAATGAAAAGATTGAGAACTTATATGCAAACGGACATCTT
ACGGCTATTGAGGCCGAAAGGGAAAAAATTAGCATTAATCAAGCAAGCAAAATTGATACAACTGATGGGGAATCTTTTGA
ATAATGGTTTTAATTTGGGAGAAGTTATCAATTTTTTAGCCTTATCAAAATTAGTAGAAAAAGAGTTTGTATTCAAAATG
CACCAAGGTCTTAGTTCTGGAAAATCATTATCTGAAATTTTAGAAAGTCTCTCTTTTTCTAAAAATGTTGTGACACAACT
TGCTTTGGTAGAAGTGCATGGAAATCTAGTAGGAACCATGCAATTGGTAGAACTGCATTTAAAAAAGCAACTTAAGGTCA
AAAAGAAATTAATTGAAGTGGCAACTTATCCAGTTGTATTGTTGGTATTTCTCATTGGAATTATGTGGGGCTTGAAAAAT
TATTTGTTGCCTCAGCTTGATAAGGGAAATAATTTTGCTACTTTATTAATTAATCATTTACCGCTAGTATTTTTTTCTGT
TGGTGCTTTAATCGTTTTACTAACAAGTTTATCAATAATAATATTCAAACATATTTCAGCACTCACTAATTTTACTTTTT
TGGTCAAAGTTCCATTAGTAAGTTCTTTTATTCGCTTGTATTTGACCGCTTATTTCTCCAGAGAATGGGGAAATTTAATT
GCTCAAGGCGTTGAATTGCGACAAATAATAGAATTGATGAAAAAGCAGAAAAGTCGCATTTTTGCGGAAGTTGGAATTAA
ACTTGATTTGGGTTTGAAGGCTGGTCAGAATTTTGAGCAAGCTGTCAGTCATTTTTCGATTTTTTTACCAGAACTTTCTT
TGATGATTGAGTACGGCGCGATTAAAGATAAATTAGGGTTGGAGCTTTCTGTTTATGCTGATGAATGTTGGGAACAATTC
TTTTCTAAGATAGACCGTCTAATGCAATTAATACAACCCCTAATTTTTATTTTTGTTGCTTTGATGATTGTCTTATTGTA
TGCAGCGATGTTGTTACCCATTTATTCTAATATGGGTTCTGGAATTTAA

Upstream 100 bases:

>100_bases
CAACGTTTGTTGGAATTGGGTTTGAGTGATTGGGAATTAAAAAATGGATTAGAGGCAGTTGTTTATCAACGGTTAATAGC
GGGAAAAGGAGTATTAGATA

Downstream 100 bases:

>100_bases
AAAAAGGAAGGAAATTTATGAAAATAGAAAATATAACTTTAATAATGAGCAAAGCTTTGTCATTAGTTAAAATTCACGGA
AGAAAGCTTTGGCAAAAAAA

Product: putative competence protein ComGB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MRKVNLTLGRRKNGMKRLRTYMQTDILRLLRPKGKKLALIKQAKLIQLMGNLLNNGFNLGEVINFLALSKLVEKEFVFKM
HQGLSSGKSLSEILESLSFSKNVVTQLALVEVHGNLVGTMQLVELHLKKQLKVKKKLIEVATYPVVLLVFLIGIMWGLKN
YLLPQLDKGNNFATLLINHLPLVFFSVGALIVLLTSLSIIIFKHISALTNFTFLVKVPLVSSFIRLYLTAYFSREWGNLI
AQGVELRQIIELMKKQKSRIFAEVGIKLDLGLKAGQNFEQAVSHFSIFLPELSLMIEYGAIKDKLGLELSVYADECWEQF
FSKIDRLMQLIQPLIFIFVALMIVLLYAAMLLPIYSNMGSGI

Sequences:

>Translated_362_residues
MRKVNLTLGRRKNGMKRLRTYMQTDILRLLRPKGKKLALIKQAKLIQLMGNLLNNGFNLGEVINFLALSKLVEKEFVFKM
HQGLSSGKSLSEILESLSFSKNVVTQLALVEVHGNLVGTMQLVELHLKKQLKVKKKLIEVATYPVVLLVFLIGIMWGLKN
YLLPQLDKGNNFATLLINHLPLVFFSVGALIVLLTSLSIIIFKHISALTNFTFLVKVPLVSSFIRLYLTAYFSREWGNLI
AQGVELRQIIELMKKQKSRIFAEVGIKLDLGLKAGQNFEQAVSHFSIFLPELSLMIEYGAIKDKLGLELSVYADECWEQF
FSKIDRLMQLIQPLIFIFVALMIVLLYAAMLLPIYSNMGSGI
>Mature_362_residues
MRKVNLTLGRRKNGMKRLRTYMQTDILRLLRPKGKKLALIKQAKLIQLMGNLLNNGFNLGEVINFLALSKLVEKEFVFKM
HQGLSSGKSLSEILESLSFSKNVVTQLALVEVHGNLVGTMQLVELHLKKQLKVKKKLIEVATYPVVLLVFLIGIMWGLKN
YLLPQLDKGNNFATLLINHLPLVFFSVGALIVLLTSLSIIIFKHISALTNFTFLVKVPLVSSFIRLYLTAYFSREWGNLI
AQGVELRQIIELMKKQKSRIFAEVGIKLDLGLKAGQNFEQAVSHFSIFLPELSLMIEYGAIKDKLGLELSVYADECWEQF
FSKIDRLMQLIQPLIFIFVALMIVLLYAAMLLPIYSNMGSGI

Specific function: Required for transformation and DNA binding [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 41017; Mature: 41017

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVNLTLGRRKNGMKRLRTYMQTDILRLLRPKGKKLALIKQAKLIQLMGNLLNNGFNLG
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCHH
EVINFLALSKLVEKEFVFKMHQGLSSGKSLSEILESLSFSKNVVTQLALVEVHGNLVGTM
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
QLVELHLKKQLKVKKKLIEVATYPVVLLVFLIGIMWGLKNYLLPQLDKGNNFATLLINHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
PLVFFSVGALIVLLTSLSIIIFKHISALTNFTFLVKVPLVSSFIRLYLTAYFSREWGNLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQGVELRQIIELMKKQKSRIFAEVGIKLDLGLKAGQNFEQAVSHFSIFLPELSLMIEYGA
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IKDKLGLELSVYADECWEQFFSKIDRLMQLIQPLIFIFVALMIVLLYAAMLLPIYSNMGS
HHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GI
CC
>Mature Secondary Structure
MRKVNLTLGRRKNGMKRLRTYMQTDILRLLRPKGKKLALIKQAKLIQLMGNLLNNGFNLG
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCHH
EVINFLALSKLVEKEFVFKMHQGLSSGKSLSEILESLSFSKNVVTQLALVEVHGNLVGTM
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
QLVELHLKKQLKVKKKLIEVATYPVVLLVFLIGIMWGLKNYLLPQLDKGNNFATLLINHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
PLVFFSVGALIVLLTSLSIIIFKHISALTNFTFLVKVPLVSSFIRLYLTAYFSREWGNLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQGVELRQIIELMKKQKSRIFAEVGIKLDLGLKAGQNFEQAVSHFSIFLPELSLMIEYGA
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IKDKLGLELSVYADECWEQFFSKIDRLMQLIQPLIFIFVALMIVLLYAAMLLPIYSNMGS
HHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GI
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2507524; 8969508; 9384377; 9422590 [H]