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The map label for this gene is zitR [H]

Identifier: 125625160

GI number: 125625160

Start: 2343028

End: 2343465

Strand: Reverse

Name: zitR [H]

Synonym: llmg_2401

Alternate gene names: 125625160

Gene position: 2343465-2343028 (Counterclockwise)

Preceding gene: 125625161

Following gene: 125625159

Centisome position: 92.65

GC content: 39.73

Gene sequence:

>438_bases
ATGAGTTTAGCAAATCAAATCGACCAGTTTCTTGGGGCAATTATGCAGTTTGCAGAAAACAAGCATGAAATATTACTCGG
CGAATGCGAAAGTAATGTTAAGCTAACAAGCACGCAAGAACATATCTTAATGATTCTAGCTGCAGAGGTTTCGACAAACG
CGAGAATTGCCGAGCAACTCAAGATTTCGCCAGCAGCGGTAACTAAAGCTCTCAAAAAATTACAAGAGCAAGAACTGATT
AAATCAAGTCGGGCAACAAATGACGAACGCGTAGTCCTTTGGAGCCTGACAGAAAAAGCAATTCCAGTTGCTAAAGAACA
TGCTGCTCATCATGAGAAAACTCTAAGTACCTACCAAGAATTAGGAGACAAATTTACTGACGAAGAACAAAAAGTGATAA
GTCAATTCTTATCAGTACTTACGGAGGAGTTTCGATGA

Upstream 100 bases:

>100_bases
TTTTTCAAATAAAAAAGTAAAAAATAATGTTAACTGGTTGACATTATTTTTACTTTGCTATATAATTAACCAGTAAACTA
ATTATGGAGGACGAAATACT

Downstream 100 bases:

>100_bases
AGAAAATATTGATGTTATTTGCTATTCCGGCAGTTTTACTTCTTGCTGGTTGTCAAAAAACAGCAGACAAACCAGAAGTT
GTGACAACTTTTGAGCCGAT

Product: transcriptional regulator of the zit operon

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MSLANQIDQFLGAIMQFAENKHEILLGECESNVKLTSTQEHILMILAAEVSTNARIAEQLKISPAAVTKALKKLQEQELI
KSSRATNDERVVLWSLTEKAIPVAKEHAAHHEKTLSTYQELGDKFTDEEQKVISQFLSVLTEEFR

Sequences:

>Translated_145_residues
MSLANQIDQFLGAIMQFAENKHEILLGECESNVKLTSTQEHILMILAAEVSTNARIAEQLKISPAAVTKALKKLQEQELI
KSSRATNDERVVLWSLTEKAIPVAKEHAAHHEKTLSTYQELGDKFTDEEQKVISQFLSVLTEEFR
>Mature_144_residues
SLANQIDQFLGAIMQFAENKHEILLGECESNVKLTSTQEHILMILAAEVSTNARIAEQLKISPAAVTKALKKLQEQELIK
SSRATNDERVVLWSLTEKAIPVAKEHAAHHEKTLSTYQELGDKFTDEEQKVISQFLSVLTEEFR

Specific function: Transcriptional repressor for the adc operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16334; Mature: 16203

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLANQIDQFLGAIMQFAENKHEILLGECESNVKLTSTQEHILMILAAEVSTNARIAEQL
CCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEECCCHHHHHHHHHHHHCCCHHHHHHH
KISPAAVTKALKKLQEQELIKSSRATNDERVVLWSLTEKAIPVAKEHAAHHEKTLSTYQE
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHCCHHHHHHHHHHHHHHHHHH
LGDKFTDEEQKVISQFLSVLTEEFR
HHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLANQIDQFLGAIMQFAENKHEILLGECESNVKLTSTQEHILMILAAEVSTNARIAEQL
CHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEECCCHHHHHHHHHHHHCCCHHHHHHH
KISPAAVTKALKKLQEQELIKSSRATNDERVVLWSLTEKAIPVAKEHAAHHEKTLSTYQE
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHCCHHHHHHHHHHHHHHHHHH
LGDKFTDEEQKVISQFLSVLTEEFR
HHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA