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The map label for this gene is nusG [H]

Identifier: 125625148

GI number: 125625148

Start: 2330500

End: 2331057

Strand: Reverse

Name: nusG [H]

Synonym: llmg_2388

Alternate gene names: 125625148

Gene position: 2331057-2330500 (Counterclockwise)

Preceding gene: 125625149

Following gene: 125625147

Centisome position: 92.16

GC content: 38.89

Gene sequence:

>558_bases
ATGGAAGATAATAATTTAGTAAGTTTTGACCAAGGTTGGTTTGTTATTCAAACTTATGCAGGTTATGAGCGTAAAGTCAA
AGAAGATTTGCTTGAACGTGCTGAACTTTATAATATGGCAGATAAAATCTTGCGCGTCGAAATTCCAACGGAAACAATTC
GTACCGAAGTGAACGGTAAAATCAAAGACGTTGAAGAAAACTTGTTCCCAGGATATGTTTTGGTCGAAATGAACATGACT
GATGAAGCGTGGTTTATCGTGCGTAATACACCAAACGTTACTGGATTCGTTGGTTCACACGGGAACCGTTCGAAACCTAC
ACCACTTTTTGAACAAGAAATCCAAGATATCTTGGTTGGTATGGGCAAAATTGTTCGTGAAATTGACTTTGACGTTTTTG
TTGGCAAACGCGTCCGTATTGTTGATGGAGCCTTTTCAGGATTTGAAGCGCCAATTACTGAAATCAATGGCGATAAATTG
ACTTTGACTGTTGATATGTTTGGTCGTGCAACTCCAGTTGAATTGGACATGCACCAAATCGAAGATATTCAAGCCTAA

Upstream 100 bases:

>100_bases
CCCTTTTTCTTGTACCCAAATTACTGACAGAAATGTTCTAGAAGCTCTGTCAGCTGGGATTTCACTAATTAAGTAAAAAA
TAAATACAGAGGTATTTCAA

Downstream 100 bases:

>100_bases
TTAATTATTATAAAAAAAGCCACGATGATTCGTGGCTTTTTGCGAGTTTACAGAATATTTGTTATAATTATAAAAAATGT
GATTGGGGAATAAATATCAT

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MEDNNLVSFDQGWFVIQTYAGYERKVKEDLLERAELYNMADKILRVEIPTETIRTEVNGKIKDVEENLFPGYVLVEMNMT
DEAWFIVRNTPNVTGFVGSHGNRSKPTPLFEQEIQDILVGMGKIVREIDFDVFVGKRVRIVDGAFSGFEAPITEINGDKL
TLTVDMFGRATPVELDMHQIEDIQA

Sequences:

>Translated_185_residues
MEDNNLVSFDQGWFVIQTYAGYERKVKEDLLERAELYNMADKILRVEIPTETIRTEVNGKIKDVEENLFPGYVLVEMNMT
DEAWFIVRNTPNVTGFVGSHGNRSKPTPLFEQEIQDILVGMGKIVREIDFDVFVGKRVRIVDGAFSGFEAPITEINGDKL
TLTVDMFGRATPVELDMHQIEDIQA
>Mature_185_residues
MEDNNLVSFDQGWFVIQTYAGYERKVKEDLLERAELYNMADKILRVEIPTETIRTEVNGKIKDVEENLFPGYVLVEMNMT
DEAWFIVRNTPNVTGFVGSHGNRSKPTPLFEQEIQDILVGMGKIVREIDFDVFVGKRVRIVDGAFSGFEAPITEINGDKL
TLTVDMFGRATPVELDMHQIEDIQA

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=173, Percent_Identity=36.9942196531792, Blast_Score=121, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 21092; Mature: 21092

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDNNLVSFDQGWFVIQTYAGYERKVKEDLLERAELYNMADKILRVEIPTETIRTEVNGK
CCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHCCCC
IKDVEENLFPGYVLVEMNMTDEAWFIVRNTPNVTGFVGSHGNRSKPTPLFEQEIQDILVG
EEEHHHCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH
MGKIVREIDFDVFVGKRVRIVDGAFSGFEAPITEINGDKLTLTVDMFGRATPVELDMHQI
HHHHHHHHCCEEEECCEEEEEECCCCCCCCCCEECCCCEEEEEEEECCCCCCEEECHHHH
EDIQA
HCCCC
>Mature Secondary Structure
MEDNNLVSFDQGWFVIQTYAGYERKVKEDLLERAELYNMADKILRVEIPTETIRTEVNGK
CCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHCCCC
IKDVEENLFPGYVLVEMNMTDEAWFIVRNTPNVTGFVGSHGNRSKPTPLFEQEIQDILVG
EEEHHHCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH
MGKIVREIDFDVFVGKRVRIVDGAFSGFEAPITEINGDKLTLTVDMFGRATPVELDMHQI
HHHHHHHHCCEEEECCEEEEEECCCCCCCCCCEECCCCEEEEEEEECCCCCCEEECHHHH
EDIQA
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]