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The map label for this gene is yvdC [H]

Identifier: 125625087

GI number: 125625087

Start: 2283229

End: 2284011

Strand: Direct

Name: yvdC [H]

Synonym: llmg_2326

Alternate gene names: 125625087

Gene position: 2283229-2284011 (Clockwise)

Preceding gene: 125625077

Following gene: 125625089

Centisome position: 90.26

GC content: 33.59

Gene sequence:

>783_bases
ATGAATATAGAAAAGCTTCAGTTTTTAGCTAAATATCGTTGGATTATCGTCCTAATTTTAGCCTTAATTTTTTCAGGTCT
ATCTGTCAGTATTTTTCATTTACCATTTTTAATGACAGCCCTTGTTTTGTCAGTTATTGGACTCATTTTTGCCTATCATA
AGTCTGTTTGGCTGGTCCTTTTTATCCTATCTAATCTCCCGATGTTAGTTAGCACAATTTTTGCTTCTCAGCATCATTTT
TCAACTTTAGATACGATTATCTTTTTCATCATTTTCATTTTTACAATAATCAGCTCTTATTTGATTGCTCGCAAAGCTGA
GCTCATTCCTAAGTTAAGTTGGAAATATTTCCCACCGGTAAGAATCATACTAGGGTTTGTTTTGCTCTTTTTAGTTTCTA
TTTTGACAGGAATTTTCGCCCAAATCTTTAATCAAAGCCCAACAACAACTAACCAAGAATCACTAAATGAATTACAGAAA
GTAATTCCTATAGCTGTCTTTGCTACTCAAACCCTTGCTGCCAGTTTTTTGGAAGAACTTGTTTATCGAGTAGGAATTTT
TGAACTTATCTTTAAAAATCAAAAGTATTTTGCTTTTTTAACTGCCATGCTCCTGTTTGCATTCATGCATGGACCAACGG
ACATTTACAGCTGGTTAACTTATGGACTGATGAGTCTTGTCCTTACTGGGCTCTATGCTAAGTATCGTAATTTTTATCTC
AATATGAGTGTCCATTTTCTTTGGAATCTTTTTGGACTAGTCATTGCACTTATGGTCAAATAA

Upstream 100 bases:

>100_bases
TTCATATTGAAATCTATAAGTTCCACTTACTACTTTTTTATGAAAAAGGTATCTTCTTGCGCTATTGCGGTCTATTGAAA
GTCTGTGCTATAATATTGAC

Downstream 100 bases:

>100_bases
AAAAATTACTGACAACTCTGTCAGTAATTTTTTTATTAAAGATAAATCATTTTAAATAATGCAACGGCTGCAAGTGATGC
AAGAATTGGTGCCAAAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MNIEKLQFLAKYRWIIVLILALIFSGLSVSIFHLPFLMTALVLSVIGLIFAYHKSVWLVLFILSNLPMLVSTIFASQHHF
STLDTIIFFIIFIFTIISSYLIARKAELIPKLSWKYFPPVRIILGFVLLFLVSILTGIFAQIFNQSPTTTNQESLNELQK
VIPIAVFATQTLAASFLEELVYRVGIFELIFKNQKYFAFLTAMLLFAFMHGPTDIYSWLTYGLMSLVLTGLYAKYRNFYL
NMSVHFLWNLFGLVIALMVK

Sequences:

>Translated_260_residues
MNIEKLQFLAKYRWIIVLILALIFSGLSVSIFHLPFLMTALVLSVIGLIFAYHKSVWLVLFILSNLPMLVSTIFASQHHF
STLDTIIFFIIFIFTIISSYLIARKAELIPKLSWKYFPPVRIILGFVLLFLVSILTGIFAQIFNQSPTTTNQESLNELQK
VIPIAVFATQTLAASFLEELVYRVGIFELIFKNQKYFAFLTAMLLFAFMHGPTDIYSWLTYGLMSLVLTGLYAKYRNFYL
NMSVHFLWNLFGLVIALMVK
>Mature_260_residues
MNIEKLQFLAKYRWIIVLILALIFSGLSVSIFHLPFLMTALVLSVIGLIFAYHKSVWLVLFILSNLPMLVSTIFASQHHF
STLDTIIFFIIFIFTIISSYLIARKAELIPKLSWKYFPPVRIILGFVLLFLVSILTGIFAQIFNQSPTTTNQESLNELQK
VIPIAVFATQTLAASFLEELVYRVGIFELIFKNQKYFAFLTAMLLFAFMHGPTDIYSWLTYGLMSLVLTGLYAKYRNFYL
NMSVHFLWNLFGLVIALMVK

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0177 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003675 [H]

Pfam domain/function: PF02517 Abi [H]

EC number: NA

Molecular weight: Translated: 29943; Mature: 29943

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]