| Definition | Lactococcus lactis subsp. cremoris MG1363, complete genome. |
|---|---|
| Accession | NC_009004 |
| Length | 2,529,478 |
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The map label for this gene is snf
Identifier: 125625080
GI number: 125625080
Start: 2269664
End: 2272768
Strand: Reverse
Name: snf
Synonym: llmg_2319
Alternate gene names: NA
Gene position: 2272768-2269664 (Counterclockwise)
Preceding gene: 125625081
Following gene: 125625079
Centisome position: 89.85
GC content: 33.88
Gene sequence:
>3105_bases ATGAGTAGAATGATGCCGGCACGAGTGCGGAGTGAGGGAATCGCCCTCTATTCGAAAGGCTTCTTAAATGATCCGATTGA AACTGATTTTAAGTTAACTGCAGAAATTGATGGTGAAGAAGTAAGTTATGATTTAGATGGAGCTCAAGATAGTTGTACTT GTTCAATTTTTCAACAAAATCATCGCTATTGCAAACATATTGCAGCGATTGAAGAGTATTTGAAAAATCAGGACAAGGGC AGTCTAGAGACAAAGGATAAAGAAACTAAAGGAGCCGAAAGAGGGCTTTATAATGAAAATATTGCTTTTCTAGATGCAGT AAATGGAGAAACTCAACTAAATTTCAGTACAGATCAGTATTCTATCGAAGTTCAAATTGAAGATAACAGTCAGCTTTATG ATTATTTTTCAATGGACTACTTTTTATACTTTGATTTAAAGTTGAAAAGTAAAAATTTAGGACGTTCATATGTCATTAAA GATATTCCCTATTTTTTACGAGCGCTTAAAAATTACAGCCAGTATTCATTAGGCTCGTTACACTACATTGATCTCTTCTT TGATAATTTTGATGAGTCCAGTCAGGAATTTTTGAGTTTTCTACTAAAGATTGATGGGAAATCAGACGAGGCTCTGACCA AATCCTTATTTATCAAAAATGGACGCTATCTCAATATCCCCTTCTTGTTTTTGGAAGAAGCCATGGATTTAGTCTCTGCT TTAGAAGTTTATCAGCTTAAAATTATCGGAAGAACAGTTAATTATTTTACATTTATTCCATTGGATAATGATTCAGAAAT TTTTAAATTTAAAGTTGAGAGCCAACAAGATTATATTGAATTGAGCTTATTCAGCGAAGATTATCATAATTTTTATGATT ATTCGCTTCTTTATGATAATAATGTATTCTATAAACTGAACCAAGAACAACGTCGCTTACTCCTTGTCTTAGACAAACAA TTTGCTCAGAAATCAAAAATAAAATTCTCATATTCGGAAAAAGACAAACTTGCTCAAGCACTTCAACAATTATCAACTTT AGGAAAAATTGAAGCACCAGAACATTTTGTTGTCAAACCATTTGATGCAAAGTTCACTTTTGATTTATTAGATGAAAAAA TGCTTAGTTTGGCAATGAAATTTGATTATGGAACTTTTTCTATTGATAGCTTTCATGACTTGGAAACCTTAGAATTTTCA AGGGATTTGCGTAAGGAACAAAAGATTTTTGCTTTAATGGAGCGACTACAATTTGCCAAAGCTTTTAATTCAACTTTAGA AATTACGGAGCATTTGTCAGAGAATTTCTTTTTAAAGATTTTACCTTCTTTTCAAAAGCTTGGTCAAATTGAATTATCAC CAACTTTAAGAAATATGAGAATGGATGAAGTCCCAGAAATTCATATTGATAGCCAAGGAGGCTTGTTAGATATCTCCTTT GATATTCCGCATGTTGAGGATGGCGAATTTGCAAATGTGATTGCTAAATTGCAAGAAAATGCTGAGTTTTACATTAGTGA AAGTGGGAAATTTTATCATTTCAATGAAAAATTCGATCGCCTAAAAGCGGCATTACATGAACTTGATGACCAATTTGTTA TTCAAGGAAGTAGTTTGCATGTTAATATTAATCGTAGTTTCCAAATTTCTAAAATTTTTGAAAAGATTAGTGGTGCCTCT TTTTCTGAGAAATTTAAATCACTTTATCAACATTTAACTCACCCTGAAGAATTTCCCTATGAGAAACCTGAGCATATTAA GGCTTCTTTGCGTTCTTATCAAGAAACAGGTGTTCGTTGGATGAGTATGTTATCCCATTACAATCTAGGAGGAATTCTTG CTGATGATATGGGATTGGGGAAAACCGTTCAAGCTATTACTTTTATCCTCTCAAATCTAAAAAAAGACGAAAGTGTATTA ATTACTGCCCCAGCCAGTCTTACTTACAACTGGGCAAGTGAGTTTGAAAAATTTACTGACGAAATTGATTTTGTCGTGAT TGATGGTAATAAAGCTGACCGGACTAAGGAGATTCAAGAGAATCACCAGATTTATATTACGAGCTATGGTAGCTTTTTGA AAGATTTTGAAGATTATCAAGATAAAAAGTTAAATTACTTACTTTTAGACGAAGCGCAAGTTGTAAAAAATTATAGTAGT AAAACGAATAAATCTCTTTCGGCTCTTAATGTTGAGCATACTTTTGCTCTTTCAGGGACGCCACTTGAAAATCGAATTGA AGAAATTTGGGCAATTTTCCAAGTTGTAATGCCAGGCTTTTTACCAAAGCGTGAAAAATTTAATAAGATGGAACCTTCGG TCATCTCAAGATTGATTCAACCATTTATCATGCGTCGTAAAAAAGGGGATGTACTTGAGGAACTTCCAGATAAAATGGAA ATTACGGTTTACAATCAGTTGGCCGATGACCAAAAAGTGATTTATCTTGCACAACTTGAATTAATGCAAAAACAAGTTTT AGAAATGGATAATGCAGCTTTATCGCGTTCAAGAATCGAAATTTTAGCAGGAATTACCAGATTAAGGCAAATTTGTAATA CACCAGCTTTATTCATGGATGATTACAAGGGAAGTTCAGGTAAGCTTGAACGCTTAAGAGAACTACTGGCTCAAATTAAA GATTCTGGACATCGTCCTTTGATTTTCTCTCAATTTACAAAAGTTTTTCCACATATTGAAAAATTAATGGAAGAACAAGA AATGACTGCTTATAAATTGACAGGCTCTACTCCGATTAAAGACCGACTTTCCATGGTTCAGGCATTTAATGCTGGAAGCC GTGATGCTTTCTTAGTTTCTTTGAAAGCTGGTGGTGTTGGTCTTAATTTGACAAGTGCTGATGTTGTGATTTTAGTCGAT TTGTGGTGGAATCCGGCAGTAGAAGAACAGGCAATTGCGCGTGCCCATCGTATGGGACAAAAAAATACAGTTGAAGTGAT TCGCTTGATTACACAAGGGACAATTGAAGAGAAAATTATGGAAATCCAAGAACGTAAAAAAGACCTGATTGCAAATGTTT TGGAAGGCGATACGGTTGATAAAGTTCTTAGTGAAGCAGAAATTCGGGAAATTCTCGGAGTATAG
Upstream 100 bases:
>100_bases AATTGACAAGAAAGAGGGAAATGCTAGCAAAATAACGGTAATTATGGTATAATATACGCAAAATTTTGAAATAATTAATT CGAGGAAAAAATAAAAAAAT
Downstream 100 bases:
>100_bases CTTTAAAAAACTTAGAAATTAAGCTATAATGGATATTGAAACGGTTATCTTAAAGAATCGGATTGGCTTTTAGGAGCTGA CGAGATGACAATAAAAGCTC
Product: SWI/SNF family helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1034; Mature: 1033
Protein sequence:
>1034_residues MSRMMPARVRSEGIALYSKGFLNDPIETDFKLTAEIDGEEVSYDLDGAQDSCTCSIFQQNHRYCKHIAAIEEYLKNQDKG SLETKDKETKGAERGLYNENIAFLDAVNGETQLNFSTDQYSIEVQIEDNSQLYDYFSMDYFLYFDLKLKSKNLGRSYVIK DIPYFLRALKNYSQYSLGSLHYIDLFFDNFDESSQEFLSFLLKIDGKSDEALTKSLFIKNGRYLNIPFLFLEEAMDLVSA LEVYQLKIIGRTVNYFTFIPLDNDSEIFKFKVESQQDYIELSLFSEDYHNFYDYSLLYDNNVFYKLNQEQRRLLLVLDKQ FAQKSKIKFSYSEKDKLAQALQQLSTLGKIEAPEHFVVKPFDAKFTFDLLDEKMLSLAMKFDYGTFSIDSFHDLETLEFS RDLRKEQKIFALMERLQFAKAFNSTLEITEHLSENFFLKILPSFQKLGQIELSPTLRNMRMDEVPEIHIDSQGGLLDISF DIPHVEDGEFANVIAKLQENAEFYISESGKFYHFNEKFDRLKAALHELDDQFVIQGSSLHVNINRSFQISKIFEKISGAS FSEKFKSLYQHLTHPEEFPYEKPEHIKASLRSYQETGVRWMSMLSHYNLGGILADDMGLGKTVQAITFILSNLKKDESVL ITAPASLTYNWASEFEKFTDEIDFVVIDGNKADRTKEIQENHQIYITSYGSFLKDFEDYQDKKLNYLLLDEAQVVKNYSS KTNKSLSALNVEHTFALSGTPLENRIEEIWAIFQVVMPGFLPKREKFNKMEPSVISRLIQPFIMRRKKGDVLEELPDKME ITVYNQLADDQKVIYLAQLELMQKQVLEMDNAALSRSRIEILAGITRLRQICNTPALFMDDYKGSSGKLERLRELLAQIK DSGHRPLIFSQFTKVFPHIEKLMEEQEMTAYKLTGSTPIKDRLSMVQAFNAGSRDAFLVSLKAGGVGLNLTSADVVILVD LWWNPAVEEQAIARAHRMGQKNTVEVIRLITQGTIEEKIMEIQERKKDLIANVLEGDTVDKVLSEAEIREILGV
Sequences:
>Translated_1034_residues MSRMMPARVRSEGIALYSKGFLNDPIETDFKLTAEIDGEEVSYDLDGAQDSCTCSIFQQNHRYCKHIAAIEEYLKNQDKG SLETKDKETKGAERGLYNENIAFLDAVNGETQLNFSTDQYSIEVQIEDNSQLYDYFSMDYFLYFDLKLKSKNLGRSYVIK DIPYFLRALKNYSQYSLGSLHYIDLFFDNFDESSQEFLSFLLKIDGKSDEALTKSLFIKNGRYLNIPFLFLEEAMDLVSA LEVYQLKIIGRTVNYFTFIPLDNDSEIFKFKVESQQDYIELSLFSEDYHNFYDYSLLYDNNVFYKLNQEQRRLLLVLDKQ FAQKSKIKFSYSEKDKLAQALQQLSTLGKIEAPEHFVVKPFDAKFTFDLLDEKMLSLAMKFDYGTFSIDSFHDLETLEFS RDLRKEQKIFALMERLQFAKAFNSTLEITEHLSENFFLKILPSFQKLGQIELSPTLRNMRMDEVPEIHIDSQGGLLDISF DIPHVEDGEFANVIAKLQENAEFYISESGKFYHFNEKFDRLKAALHELDDQFVIQGSSLHVNINRSFQISKIFEKISGAS FSEKFKSLYQHLTHPEEFPYEKPEHIKASLRSYQETGVRWMSMLSHYNLGGILADDMGLGKTVQAITFILSNLKKDESVL ITAPASLTYNWASEFEKFTDEIDFVVIDGNKADRTKEIQENHQIYITSYGSFLKDFEDYQDKKLNYLLLDEAQVVKNYSS KTNKSLSALNVEHTFALSGTPLENRIEEIWAIFQVVMPGFLPKREKFNKMEPSVISRLIQPFIMRRKKGDVLEELPDKME ITVYNQLADDQKVIYLAQLELMQKQVLEMDNAALSRSRIEILAGITRLRQICNTPALFMDDYKGSSGKLERLRELLAQIK DSGHRPLIFSQFTKVFPHIEKLMEEQEMTAYKLTGSTPIKDRLSMVQAFNAGSRDAFLVSLKAGGVGLNLTSADVVILVD LWWNPAVEEQAIARAHRMGQKNTVEVIRLITQGTIEEKIMEIQERKKDLIANVLEGDTVDKVLSEAEIREILGV >Mature_1033_residues SRMMPARVRSEGIALYSKGFLNDPIETDFKLTAEIDGEEVSYDLDGAQDSCTCSIFQQNHRYCKHIAAIEEYLKNQDKGS LETKDKETKGAERGLYNENIAFLDAVNGETQLNFSTDQYSIEVQIEDNSQLYDYFSMDYFLYFDLKLKSKNLGRSYVIKD IPYFLRALKNYSQYSLGSLHYIDLFFDNFDESSQEFLSFLLKIDGKSDEALTKSLFIKNGRYLNIPFLFLEEAMDLVSAL EVYQLKIIGRTVNYFTFIPLDNDSEIFKFKVESQQDYIELSLFSEDYHNFYDYSLLYDNNVFYKLNQEQRRLLLVLDKQF AQKSKIKFSYSEKDKLAQALQQLSTLGKIEAPEHFVVKPFDAKFTFDLLDEKMLSLAMKFDYGTFSIDSFHDLETLEFSR DLRKEQKIFALMERLQFAKAFNSTLEITEHLSENFFLKILPSFQKLGQIELSPTLRNMRMDEVPEIHIDSQGGLLDISFD IPHVEDGEFANVIAKLQENAEFYISESGKFYHFNEKFDRLKAALHELDDQFVIQGSSLHVNINRSFQISKIFEKISGASF SEKFKSLYQHLTHPEEFPYEKPEHIKASLRSYQETGVRWMSMLSHYNLGGILADDMGLGKTVQAITFILSNLKKDESVLI TAPASLTYNWASEFEKFTDEIDFVVIDGNKADRTKEIQENHQIYITSYGSFLKDFEDYQDKKLNYLLLDEAQVVKNYSSK TNKSLSALNVEHTFALSGTPLENRIEEIWAIFQVVMPGFLPKREKFNKMEPSVISRLIQPFIMRRKKGDVLEELPDKMEI TVYNQLADDQKVIYLAQLELMQKQVLEMDNAALSRSRIEILAGITRLRQICNTPALFMDDYKGSSGKLERLRELLAQIKD SGHRPLIFSQFTKVFPHIEKLMEEQEMTAYKLTGSTPIKDRLSMVQAFNAGSRDAFLVSLKAGGVGLNLTSADVVILVDL WWNPAVEEQAIARAHRMGQKNTVEVIRLITQGTIEEKIMEIQERKKDLIANVLEGDTVDKVLSEAEIREILGV
Specific function: Unknown
COG id: COG0553
COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SWIM-type zinc finger [H]
Homologues:
Organism=Homo sapiens, GI164419749, Length=474, Percent_Identity=33.9662447257384, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI21071058, Length=488, Percent_Identity=32.7868852459016, Blast_Score=248, Evalue=3e-65, Organism=Homo sapiens, GI21071044, Length=486, Percent_Identity=33.1275720164609, Blast_Score=241, Evalue=4e-63, Organism=Homo sapiens, GI148612870, Length=456, Percent_Identity=33.5526315789474, Blast_Score=237, Evalue=4e-62, Organism=Homo sapiens, GI27477070, Length=528, Percent_Identity=32.0075757575758, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI192807316, Length=502, Percent_Identity=30.4780876494024, Blast_Score=221, Evalue=3e-57, Organism=Homo sapiens, GI192807320, Length=502, Percent_Identity=30.4780876494024, Blast_Score=221, Evalue=3e-57, Organism=Homo sapiens, GI192807314, Length=502, Percent_Identity=30.4780876494024, Blast_Score=221, Evalue=3e-57, Organism=Homo sapiens, GI192807318, Length=502, Percent_Identity=30.4780876494024, Blast_Score=221, Evalue=3e-57, Organism=Homo sapiens, GI192807323, Length=502, Percent_Identity=30.4780876494024, Blast_Score=221, Evalue=4e-57, Organism=Homo sapiens, GI48255898, Length=501, Percent_Identity=30.3393213572854, Blast_Score=221, Evalue=4e-57, Organism=Homo sapiens, GI192807312, Length=502, Percent_Identity=30.4780876494024, Blast_Score=220, Evalue=4e-57, Organism=Homo sapiens, GI21071056, Length=502, Percent_Identity=30.4780876494024, Blast_Score=220, Evalue=4e-57, Organism=Homo sapiens, GI48255900, Length=501, Percent_Identity=30.3393213572854, Blast_Score=220, Evalue=4e-57, Organism=Homo sapiens, GI21914927, Length=535, Percent_Identity=28.5981308411215, Blast_Score=214, Evalue=3e-55, Organism=Homo sapiens, GI24308089, Length=478, Percent_Identity=31.5899581589958, Blast_Score=213, Evalue=6e-55, Organism=Homo sapiens, GI4557565, Length=487, Percent_Identity=30.8008213552361, Blast_Score=212, Evalue=1e-54, Organism=Homo sapiens, GI190358534, Length=514, Percent_Identity=30.1556420233463, Blast_Score=212, Evalue=2e-54, Organism=Homo sapiens, GI190358536, Length=516, Percent_Identity=30.0387596899225, Blast_Score=211, Evalue=3e-54, Organism=Homo sapiens, GI190358532, Length=516, Percent_Identity=30.0387596899225, Blast_Score=211, Evalue=3e-54, Organism=Homo sapiens, GI52630322, Length=506, Percent_Identity=30.6324110671937, Blast_Score=208, Evalue=3e-53, Organism=Homo sapiens, GI158420731, Length=506, Percent_Identity=30.6324110671937, Blast_Score=207, Evalue=4e-53, Organism=Homo sapiens, GI52630326, Length=506, Percent_Identity=30.6324110671937, Blast_Score=207, Evalue=4e-53, Organism=Homo sapiens, GI118421089, Length=464, Percent_Identity=32.9741379310345, Blast_Score=202, Evalue=2e-51, Organism=Homo sapiens, GI51599156, Length=517, Percent_Identity=31.3346228239845, Blast_Score=197, Evalue=4e-50, Organism=Homo sapiens, GI6912622, Length=503, Percent_Identity=29.6222664015905, Blast_Score=197, Evalue=4e-50, Organism=Homo sapiens, GI54112403, Length=502, Percent_Identity=29.6812749003984, Blast_Score=192, Evalue=2e-48, Organism=Homo sapiens, GI114326455, Length=480, Percent_Identity=29.7916666666667, Blast_Score=191, Evalue=3e-48, Organism=Homo sapiens, GI282165704, Length=480, Percent_Identity=29.7916666666667, Blast_Score=190, Evalue=8e-48, Organism=Homo sapiens, GI95147342, Length=481, Percent_Identity=30.5613305613306, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI29244924, Length=502, Percent_Identity=29.4820717131474, Blast_Score=187, Evalue=5e-47, Organism=Homo sapiens, GI68299795, Length=469, Percent_Identity=31.5565031982942, Blast_Score=186, Evalue=1e-46, Organism=Homo sapiens, GI58331268, Length=533, Percent_Identity=28.8930581613508, Blast_Score=185, Evalue=2e-46, Organism=Homo sapiens, GI58219008, Length=548, Percent_Identity=28.2846715328467, Blast_Score=176, Evalue=8e-44, Organism=Homo sapiens, GI216548193, Length=516, Percent_Identity=29.4573643410853, Blast_Score=172, Evalue=1e-42, Organism=Homo sapiens, GI216548186, Length=516, Percent_Identity=29.4573643410853, Blast_Score=172, Evalue=1e-42, Organism=Homo sapiens, GI40807471, Length=606, Percent_Identity=26.0726072607261, Blast_Score=163, Evalue=1e-39, Organism=Homo sapiens, GI38708321, Length=341, Percent_Identity=32.258064516129, Blast_Score=161, Evalue=4e-39, Organism=Homo sapiens, GI146219843, Length=303, Percent_Identity=30.03300330033, Blast_Score=147, Evalue=7e-35, Organism=Homo sapiens, GI187761314, Length=431, Percent_Identity=27.6102088167053, Blast_Score=125, Evalue=3e-28, Organism=Homo sapiens, GI21071060, Length=431, Percent_Identity=27.6102088167053, Blast_Score=125, Evalue=3e-28, Organism=Homo sapiens, GI56549696, Length=315, Percent_Identity=29.5238095238095, Blast_Score=123, Evalue=1e-27, Organism=Homo sapiens, GI62860046, Length=466, Percent_Identity=23.6051502145923, Blast_Score=115, Evalue=3e-25, Organism=Homo sapiens, GI21071052, Length=174, Percent_Identity=37.3563218390805, Blast_Score=105, Evalue=2e-22, Organism=Homo sapiens, GI21071054, Length=174, Percent_Identity=37.3563218390805, Blast_Score=105, Evalue=2e-22, Organism=Homo sapiens, GI20336205, Length=191, Percent_Identity=31.9371727748691, Blast_Score=81, Evalue=4e-15, Organism=Homo sapiens, GI20336209, Length=191, Percent_Identity=31.9371727748691, Blast_Score=81, Evalue=4e-15, Organism=Homo sapiens, GI168823443, Length=154, Percent_Identity=30.5194805194805, Blast_Score=76, Evalue=2e-13, Organism=Caenorhabditis elegans, GI25144179, Length=453, Percent_Identity=35.0993377483444, Blast_Score=254, Evalue=2e-67, Organism=Caenorhabditis elegans, GI17539642, Length=491, Percent_Identity=32.9938900203666, Blast_Score=240, Evalue=2e-63, Organism=Caenorhabditis elegans, GI17551114, Length=493, Percent_Identity=33.0628803245436, Blast_Score=234, Evalue=1e-61, Organism=Caenorhabditis elegans, GI32563629, Length=458, Percent_Identity=34.061135371179, Blast_Score=224, Evalue=3e-58, Organism=Caenorhabditis elegans, GI193204424, Length=538, Percent_Identity=30.2973977695167, Blast_Score=222, Evalue=9e-58, Organism=Caenorhabditis elegans, GI17569817, Length=507, Percent_Identity=31.163708086785, Blast_Score=213, Evalue=4e-55, Organism=Caenorhabditis elegans, GI17562600, Length=508, Percent_Identity=31.496062992126, Blast_Score=206, Evalue=8e-53, Organism=Caenorhabditis elegans, GI71988744, Length=528, Percent_Identity=28.5984848484849, Blast_Score=203, Evalue=5e-52, Organism=Caenorhabditis elegans, GI193203140, Length=512, Percent_Identity=30.6640625, Blast_Score=187, Evalue=2e-47, Organism=Caenorhabditis elegans, GI71991518, Length=503, Percent_Identity=27.2365805168986, Blast_Score=187, Evalue=3e-47, Organism=Caenorhabditis elegans, GI71995707, Length=485, Percent_Identity=29.6907216494845, Blast_Score=180, Evalue=4e-45, Organism=Caenorhabditis elegans, GI17508659, Length=521, Percent_Identity=27.6391554702495, Blast_Score=176, Evalue=7e-44, Organism=Caenorhabditis elegans, GI115534248, Length=300, Percent_Identity=31, Blast_Score=150, Evalue=4e-36, Organism=Caenorhabditis elegans, GI193203249, Length=173, Percent_Identity=41.6184971098266, Blast_Score=128, Evalue=1e-29, Organism=Caenorhabditis elegans, GI25148960, Length=433, Percent_Identity=25.8660508083141, Blast_Score=122, Evalue=9e-28, Organism=Caenorhabditis elegans, GI17552194, Length=433, Percent_Identity=25.8660508083141, Blast_Score=122, Evalue=1e-27, Organism=Caenorhabditis elegans, GI25148958, Length=433, Percent_Identity=25.8660508083141, Blast_Score=122, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17540630, Length=185, Percent_Identity=38.3783783783784, Blast_Score=119, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17561718, Length=127, Percent_Identity=47.244094488189, Blast_Score=112, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17538806, Length=174, Percent_Identity=29.8850574712644, Blast_Score=85, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71980419, Length=284, Percent_Identity=26.056338028169, Blast_Score=79, Evalue=9e-15, Organism=Saccharomyces cerevisiae, GI6325175, Length=539, Percent_Identity=33.7662337662338, Blast_Score=269, Evalue=2e-72, Organism=Saccharomyces cerevisiae, GI6324879, Length=482, Percent_Identity=32.9875518672199, Blast_Score=235, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6322065, Length=484, Percent_Identity=34.0909090909091, Blast_Score=234, Evalue=6e-62, Organism=Saccharomyces cerevisiae, GI6319722, Length=496, Percent_Identity=31.8548387096774, Blast_Score=232, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6324864, Length=495, Percent_Identity=31.5151515151515, Blast_Score=228, Evalue=3e-60, Organism=Saccharomyces cerevisiae, GI6321012, Length=479, Percent_Identity=32.3590814196242, Blast_Score=219, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6322495, Length=522, Percent_Identity=29.3103448275862, Blast_Score=209, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6321153, Length=542, Percent_Identity=28.0442804428044, Blast_Score=199, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6319547, Length=495, Percent_Identity=30.1010101010101, Blast_Score=187, Evalue=9e-48, Organism=Saccharomyces cerevisiae, GI6321275, Length=499, Percent_Identity=27.8557114228457, Blast_Score=170, Evalue=9e-43, Organism=Saccharomyces cerevisiae, GI6321289, Length=334, Percent_Identity=29.940119760479, Blast_Score=157, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6320541, Length=316, Percent_Identity=27.5316455696203, Blast_Score=139, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6319300, Length=273, Percent_Identity=29.6703296703297, Blast_Score=120, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6323060, Length=146, Percent_Identity=41.7808219178082, Blast_Score=110, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6319590, Length=156, Percent_Identity=37.8205128205128, Blast_Score=106, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6324765, Length=163, Percent_Identity=33.1288343558282, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI281361889, Length=521, Percent_Identity=32.2456813819578, Blast_Score=239, Evalue=5e-63, Organism=Drosophila melanogaster, GI24653134, Length=467, Percent_Identity=32.762312633833, Blast_Score=238, Evalue=2e-62, Organism=Drosophila melanogaster, GI24653132, Length=467, Percent_Identity=32.762312633833, Blast_Score=238, Evalue=2e-62, Organism=Drosophila melanogaster, GI17737463, Length=467, Percent_Identity=32.762312633833, Blast_Score=238, Evalue=2e-62, Organism=Drosophila melanogaster, GI24664914, Length=502, Percent_Identity=30.4780876494024, Blast_Score=229, Evalue=6e-60, Organism=Drosophila melanogaster, GI17985967, Length=502, Percent_Identity=30.4780876494024, Blast_Score=229, Evalue=6e-60, Organism=Drosophila melanogaster, GI24664907, Length=502, Percent_Identity=30.4780876494024, Blast_Score=229, Evalue=7e-60, Organism=Drosophila melanogaster, GI28574896, Length=502, Percent_Identity=30.4780876494024, Blast_Score=229, Evalue=7e-60, Organism=Drosophila melanogaster, GI85724914, Length=548, Percent_Identity=28.6496350364964, Blast_Score=204, Evalue=2e-52, Organism=Drosophila melanogaster, GI24666729, Length=475, Percent_Identity=31.3684210526316, Blast_Score=202, Evalue=1e-51, Organism=Drosophila melanogaster, GI17137266, Length=462, Percent_Identity=33.3333333333333, Blast_Score=201, Evalue=2e-51, Organism=Drosophila melanogaster, GI281366478, Length=505, Percent_Identity=30.2970297029703, Blast_Score=195, Evalue=1e-49, Organism=Drosophila melanogaster, GI24667055, Length=505, Percent_Identity=30.2970297029703, Blast_Score=195, Evalue=1e-49, Organism=Drosophila melanogaster, GI62472261, Length=505, Percent_Identity=30.2970297029703, Blast_Score=195, Evalue=1e-49, Organism=Drosophila melanogaster, GI24583161, Length=548, Percent_Identity=28.8321167883212, Blast_Score=193, Evalue=4e-49, Organism=Drosophila melanogaster, GI17986031, Length=508, Percent_Identity=31.6929133858268, Blast_Score=187, Evalue=4e-47, Organism=Drosophila melanogaster, GI221330583, Length=510, Percent_Identity=31.5686274509804, Blast_Score=187, Evalue=5e-47, Organism=Drosophila melanogaster, GI17136368, Length=500, Percent_Identity=28, Blast_Score=172, Evalue=1e-42, Organism=Drosophila melanogaster, GI24648168, Length=325, Percent_Identity=32.3076923076923, Blast_Score=152, Evalue=9e-37, Organism=Drosophila melanogaster, GI24656962, Length=303, Percent_Identity=29.3729372937294, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI24656966, Length=303, Percent_Identity=29.3729372937294, Blast_Score=144, Evalue=3e-34, Organism=Drosophila melanogaster, GI28573600, Length=300, Percent_Identity=29.3333333333333, Blast_Score=140, Evalue=7e-33, Organism=Drosophila melanogaster, GI85724912, Length=319, Percent_Identity=27.5862068965517, Blast_Score=121, Evalue=3e-27, Organism=Drosophila melanogaster, GI24644932, Length=158, Percent_Identity=34.1772151898734, Blast_Score=100, Evalue=6e-21, Organism=Drosophila melanogaster, GI281361297, Length=159, Percent_Identity=32.7044025157233, Blast_Score=85, Evalue=3e-16, Organism=Drosophila melanogaster, GI21356675, Length=124, Percent_Identity=32.258064516129, Blast_Score=81, Evalue=4e-15, Organism=Drosophila melanogaster, GI24650076, Length=124, Percent_Identity=32.258064516129, Blast_Score=81, Evalue=4e-15, Organism=Drosophila melanogaster, GI62484263, Length=123, Percent_Identity=34.1463414634146, Blast_Score=77, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000330 - InterPro: IPR007527 [H]
Pfam domain/function: PF00271 Helicase_C; PF00176 SNF2_N; PF04434 SWIM [H]
EC number: NA
Molecular weight: Translated: 119446; Mature: 119315
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS50966 ZF_SWIM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRMMPARVRSEGIALYSKGFLNDPIETDFKLTAEIDGEEVSYDLDGAQDSCTCSIFQQN CCCCCCCHHHHCCEEEEECCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCEEHHHHHH HRYCKHIAAIEEYLKNQDKGSLETKDKETKGAERGLYNENIAFLDAVNGETQLNFSTDQY HHHHHHHHHHHHHHCCCCCCCCCCCCCHHCHHHCCCCCCCEEEEEECCCCEEEEECCCEE SIEVQIEDNSQLYDYFSMDYFLYFDLKLKSKNLGRSYVIKDIPYFLRALKNYSQYSLGSL EEEEEECCCCCEEHHCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCE HYIDLFFDNFDESSQEFLSFLLKIDGKSDEALTKSLFIKNGRYLNIPFLFLEEAMDLVSA EEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHH LEVYQLKIIGRTVNYFTFIPLDNDSEIFKFKVESQQDYIELSLFSEDYHNFYDYSLLYDN HHHHHEEEEEEEEEEEEEEEECCCCCEEEEEECCCCCEEEEEEEHHHHCCCCCEEEEECC NVFYKLNQEQRRLLLVLDKQFAQKSKIKFSYSEKDKLAQALQQLSTLGKIEAPEHFVVKP CEEEEECHHHCCEEEEECHHHHHHHCEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEC FDAKFTFDLLDEKMLSLAMKFDYGTFSIDSFHDLETLEFSRDLRKEQKIFALMERLQFAK CCCCEEHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AFNSTLEITEHLSENFFLKILPSFQKLGQIELSPTLRNMRMDEVPEIHIDSQGGLLDISF HHHHHHHHHHHHCCCCEEEECHHHHHCCCEEECHHHHCCCCCCCCEEEECCCCCEEEEEE DIPHVEDGEFANVIAKLQENAEFYISESGKFYHFNEKFDRLKAALHELDDQFVIQGSSLH CCCCCCCCHHHHHHHHHHCCCEEEEECCCCEEECHHHHHHHHHHHHHCCCCEEEECCEEE VNINRSFQISKIFEKISGASFSEKFKSLYQHLTHPEEFPYEKPEHIKASLRSYQETGVRW EEECCCEEHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH MSMLSHYNLGGILADDMGLGKTVQAITFILSNLKKDESVLITAPASLTYNWASEFEKFTD HHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHHHHC EIDFVVIDGNKADRTKEIQENHQIYITSYGSFLKDFEDYQDKKLNYLLLDEAQVVKNYSS CCCEEEECCCCCCCCHHHHCCCEEEEEECHHHHHHHHHHHCCCCCEEEECCHHHHHHHHH KTNKSLSALNVEHTFALSGTPLENRIEEIWAIFQVVMPGFLPKREKFNKMEPSVISRLIQ HCCCCHHEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHH PFIMRRKKGDVLEELPDKMEITVYNQLADDQKVIYLAQLELMQKQVLEMDNAALSRSRIE HHHHHCCCCCHHHHCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH ILAGITRLRQICNTPALFMDDYKGSSGKLERLRELLAQIKDSGHRPLIFSQFTKVFPHIE HHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH KLMEEQEMTAYKLTGSTPIKDRLSMVQAFNAGSRDAFLVSLKAGGVGLNLTSADVVILVD HHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCEEEEEE LWWNPAVEEQAIARAHRMGQKNTVEVIRLITQGTIEEKIMEIQERKKDLIANVLEGDTVD ECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHH KVLSEAEIREILGV HHHHHHHHHHHHCC >Mature Secondary Structure SRMMPARVRSEGIALYSKGFLNDPIETDFKLTAEIDGEEVSYDLDGAQDSCTCSIFQQN CCCCCCHHHHCCEEEEECCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCEEHHHHHH HRYCKHIAAIEEYLKNQDKGSLETKDKETKGAERGLYNENIAFLDAVNGETQLNFSTDQY HHHHHHHHHHHHHHCCCCCCCCCCCCCHHCHHHCCCCCCCEEEEEECCCCEEEEECCCEE SIEVQIEDNSQLYDYFSMDYFLYFDLKLKSKNLGRSYVIKDIPYFLRALKNYSQYSLGSL EEEEEECCCCCEEHHCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCE HYIDLFFDNFDESSQEFLSFLLKIDGKSDEALTKSLFIKNGRYLNIPFLFLEEAMDLVSA EEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHH LEVYQLKIIGRTVNYFTFIPLDNDSEIFKFKVESQQDYIELSLFSEDYHNFYDYSLLYDN HHHHHEEEEEEEEEEEEEEEECCCCCEEEEEECCCCCEEEEEEEHHHHCCCCCEEEEECC NVFYKLNQEQRRLLLVLDKQFAQKSKIKFSYSEKDKLAQALQQLSTLGKIEAPEHFVVKP CEEEEECHHHCCEEEEECHHHHHHHCEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEC FDAKFTFDLLDEKMLSLAMKFDYGTFSIDSFHDLETLEFSRDLRKEQKIFALMERLQFAK CCCCEEHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AFNSTLEITEHLSENFFLKILPSFQKLGQIELSPTLRNMRMDEVPEIHIDSQGGLLDISF HHHHHHHHHHHHCCCCEEEECHHHHHCCCEEECHHHHCCCCCCCCEEEECCCCCEEEEEE DIPHVEDGEFANVIAKLQENAEFYISESGKFYHFNEKFDRLKAALHELDDQFVIQGSSLH CCCCCCCCHHHHHHHHHHCCCEEEEECCCCEEECHHHHHHHHHHHHHCCCCEEEECCEEE VNINRSFQISKIFEKISGASFSEKFKSLYQHLTHPEEFPYEKPEHIKASLRSYQETGVRW EEECCCEEHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH MSMLSHYNLGGILADDMGLGKTVQAITFILSNLKKDESVLITAPASLTYNWASEFEKFTD HHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHHHHC EIDFVVIDGNKADRTKEIQENHQIYITSYGSFLKDFEDYQDKKLNYLLLDEAQVVKNYSS CCCEEEECCCCCCCCHHHHCCCEEEEEECHHHHHHHHHHHCCCCCEEEECCHHHHHHHHH KTNKSLSALNVEHTFALSGTPLENRIEEIWAIFQVVMPGFLPKREKFNKMEPSVISRLIQ HCCCCHHEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHH PFIMRRKKGDVLEELPDKMEITVYNQLADDQKVIYLAQLELMQKQVLEMDNAALSRSRIE HHHHHCCCCCHHHHCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH ILAGITRLRQICNTPALFMDDYKGSSGKLERLRELLAQIKDSGHRPLIFSQFTKVFPHIE HHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH KLMEEQEMTAYKLTGSTPIKDRLSMVQAFNAGSRDAFLVSLKAGGVGLNLTSADVVILVD HHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCEEEEEE LWWNPAVEEQAIARAHRMGQKNTVEVIRLITQGTIEEKIMEIQERKKDLIANVLEGDTVD ECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHH KVLSEAEIREILGV HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7569993; 8253680 [H]