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The map label for this gene is ecsB [H]

Identifier: 125625035

GI number: 125625035

Start: 2228437

End: 2229456

Strand: Reverse

Name: ecsB [H]

Synonym: llmg_2270

Alternate gene names: 125625035

Gene position: 2229456-2228437 (Counterclockwise)

Preceding gene: 125625036

Following gene: 125625026

Centisome position: 88.14

GC content: 32.84

Gene sequence:

>1020_bases
ATGAATGAAATTTTTAAAAAACGTCGTAACCTTTGGTACCAACAAAATATAAAGTATCTTCGCTATGTTTTTAATGATCA
TTTTGTTTTGTTCTTAATGATTTTATTGGGCGCTTTAGTGGTGCAATATGTTAATTTTTTACAAGTTCATCATTTGAATT
TGTGGGGGAAGATTATTTTGGTGGTTTTTGTCAGTTTGCTTAGCCAAGTTTTAGGACGCTTAGCAACGTTTATCGAAGCC
CCCGATAAGGTTTTTTTACTGACAAAAGAATTGGAAGTTCGAGCTTATTTAATTAAATGTTTGATTCGTTCATTAATTCT
TCCAGCAATTGTATCAGGGCTTTTGGTTCTGATTGCGGCACCTTTATTAAAATTTAATCCTATTTTCTTGATTCTCTGGT
TTTTGGTTCTTGTTGGGATTAAAGCTGGCTTACTGGCTTATCAAATTTGGCGCTTTCAAAATAGTGGACTTTTAGATTGG
TCGGGATTGATTGATTTAGAGGAAGCGCGAAAAACGGGAACTTTGCGACTATTTTCATTATTTACAAATGTTAAAGGGCT
CAAATCGCACAGTCATCGTCGAAAATACCTTGATTTTTTACTGACAAAAACAAAAAGAACTTACGAATATCTATTTACAC
GAAGTTTTTTACGGTCAGGAGATTATCTGGGCTTAACGATTCGCCTCCTTATTTTGTCAATTTTATCAATGATTTTTGTC
AAGAATGGTATTGTTGCCATTGTTATGGTGGTAGTCTTTAATTACTTGCTTATTTTTCAGCTTTTATCTTTACAAACGGC
TTTTGATTATCAACTTTTGACGAGAATCTATCCATTGAAAAAAGCGGCAAAAACGGCCGGTTTACGCATGATTATTTTTA
GAGTAATGATGTTTGTGACGATTGTTGAATTAGTGCTATCATTAATTTTTGTTCGACCGTTTTTCTTGACACTTGTGATT
TTATTGGTGAACTTTTTGCTGACTAAATTCTATGTCAGATTCCGATTAAAAAATAAATAA

Upstream 100 bases:

>100_bases
CAATTTAATCAACCAAAAGCAAGCTTAGATGAGATTTATCTTGCTTTAACAAAGGGGAATATTCCAAACTCTAAAGAAGT
TGTAGAGGCAGGAAAGACGC

Downstream 100 bases:

>100_bases
AAAATGCTGACAGAAATTCTGTCAGTATTTTTTTATAAATTAATAATTTTTGTACCGTGAACGTAGTTTGTTCCAGTCAA
TTGAGCAAGTTCTTCAAAGT

Product: ABC-type transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MNEIFKKRRNLWYQQNIKYLRYVFNDHFVLFLMILLGALVVQYVNFLQVHHLNLWGKIILVVFVSLLSQVLGRLATFIEA
PDKVFLLTKELEVRAYLIKCLIRSLILPAIVSGLLVLIAAPLLKFNPIFLILWFLVLVGIKAGLLAYQIWRFQNSGLLDW
SGLIDLEEARKTGTLRLFSLFTNVKGLKSHSHRRKYLDFLLTKTKRTYEYLFTRSFLRSGDYLGLTIRLLILSILSMIFV
KNGIVAIVMVVVFNYLLIFQLLSLQTAFDYQLLTRIYPLKKAAKTAGLRMIIFRVMMFVTIVELVLSLIFVRPFFLTLVI
LLVNFLLTKFYVRFRLKNK

Sequences:

>Translated_339_residues
MNEIFKKRRNLWYQQNIKYLRYVFNDHFVLFLMILLGALVVQYVNFLQVHHLNLWGKIILVVFVSLLSQVLGRLATFIEA
PDKVFLLTKELEVRAYLIKCLIRSLILPAIVSGLLVLIAAPLLKFNPIFLILWFLVLVGIKAGLLAYQIWRFQNSGLLDW
SGLIDLEEARKTGTLRLFSLFTNVKGLKSHSHRRKYLDFLLTKTKRTYEYLFTRSFLRSGDYLGLTIRLLILSILSMIFV
KNGIVAIVMVVVFNYLLIFQLLSLQTAFDYQLLTRIYPLKKAAKTAGLRMIIFRVMMFVTIVELVLSLIFVRPFFLTLVI
LLVNFLLTKFYVRFRLKNK
>Mature_339_residues
MNEIFKKRRNLWYQQNIKYLRYVFNDHFVLFLMILLGALVVQYVNFLQVHHLNLWGKIILVVFVSLLSQVLGRLATFIEA
PDKVFLLTKELEVRAYLIKCLIRSLILPAIVSGLLVLIAAPLLKFNPIFLILWFLVLVGIKAGLLAYQIWRFQNSGLLDW
SGLIDLEEARKTGTLRLFSLFTNVKGLKSHSHRRKYLDFLLTKTKRTYEYLFTRSFLRSGDYLGLTIRLLILSILSMIFV
KNGIVAIVMVVVFNYLLIFQLLSLQTAFDYQLLTRIYPLKKAAKTAGLRMIIFRVMMFVTIVELVLSLIFVRPFFLTLVI
LLVNFLLTKFYVRFRLKNK

Specific function: Presumed to form part of an ABC-transporter, it may form a transport channel [H]

COG id: COG4473

COG function: function code U; Predicted ABC-type exoprotein transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010288 [H]

Pfam domain/function: PF05975 EcsB [H]

EC number: NA

Molecular weight: Translated: 39673; Mature: 39673

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEIFKKRRNLWYQQNIKYLRYVFNDHFVLFLMILLGALVVQYVNFLQVHHLNLWGKIIL
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVFVSLLSQVLGRLATFIEAPDKVFLLTKELEVRAYLIKCLIRSLILPAIVSGLLVLIAA
HHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLLKFNPIFLILWFLVLVGIKAGLLAYQIWRFQNSGLLDWSGLIDLEEARKTGTLRLFSL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHCCCHHHHHHH
FTNVKGLKSHSHRRKYLDFLLTKTKRTYEYLFTRSFLRSGDYLGLTIRLLILSILSMIFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
KNGIVAIVMVVVFNYLLIFQLLSLQTAFDYQLLTRIYPLKKAAKTAGLRMIIFRVMMFVT
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVELVLSLIFVRPFFLTLVILLVNFLLTKFYVRFRLKNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNEIFKKRRNLWYQQNIKYLRYVFNDHFVLFLMILLGALVVQYVNFLQVHHLNLWGKIIL
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVFVSLLSQVLGRLATFIEAPDKVFLLTKELEVRAYLIKCLIRSLILPAIVSGLLVLIAA
HHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLLKFNPIFLILWFLVLVGIKAGLLAYQIWRFQNSGLLDWSGLIDLEEARKTGTLRLFSL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHCCCHHHHHHH
FTNVKGLKSHSHRRKYLDFLLTKTKRTYEYLFTRSFLRSGDYLGLTIRLLILSILSMIFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
KNGIVAIVMVVVFNYLLIFQLLSLQTAFDYQLLTRIYPLKKAAKTAGLRMIIFRVMMFVT
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVELVLSLIFVRPFFLTLVILLVNFLLTKFYVRFRLKNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8581172; 9579061; 9384377 [H]