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The map label for this gene is ps501 [H]

Identifier: 125625033

GI number: 125625033

Start: 2226384

End: 2227565

Strand: Direct

Name: ps501 [H]

Synonym: llmg_2268

Alternate gene names: 125625033

Gene position: 2226384-2227565 (Clockwise)

Preceding gene: 125625032

Following gene: 125625034

Centisome position: 88.02

GC content: 35.62

Gene sequence:

>1182_bases
ATGAATATTAAAGAATATACAAAAAAAGACGGTACAAAGGTGTACCGCACTAACGTTTATTTGGGTGTGGATAATCTCAC
AGGTAAGCAAGTACGAACAAGTGTAACTGCTAAAAGTAAAAAGATGTGTGAAACTAAAGCACATCAAGCTATAAATGATT
TTATCAATAATGGGTCAACAATTGCAAGGGAAAAAGTCGTCTTTGATAACTTCGAGGCTTTGGCTTTGAGCTGGTTTGAA
AGTTATAAGCTGACAGTTAAGGAAAATAGTATAAGTGTTGCTGATAATTACTTACGTAATTATATACTGCCTCCTATTGG
CTCGTACAAGCTCTCTAAGATAACGCCAATGTTATTGCAGGAACTTGTCAATAAATGGGCTAATAACGCAAATACAGCCG
AAATAATCAACGGTAAGCGTGAGCGAGGTAAATGTAAGGATTATAAGCTACTTCTTAACTTTATAAAACGTATCCTTGAT
TATGGTATGCAATTAGGAGCTATCGAGGACAATTCAGCTATAAAGGTTTTCCCTCCTAAGTTAAAGACAAGGACAGTTAA
AAAGATTAAGTATTTTGATAATGAGGAGCTAAAACAATTCTTGTTGTATCTTGATACTTTAGAACCAAGCACGGACAATC
GAAAGAGTAAGACTTTATACAAACTACTTCTTGCAACTGGCTTACGTGTAGGGGAGGCTATGGCTCTTTCTTGGTCTGAT
ATTGATTTTAACAACCATTATCTCAGTGTGTCTAAAACTCTAATTCAACAAAGCAATTTGATACAGGATAGCGCAAAGAC
AAAAGAGAGTAATCGTTCTGTGTTTTTGGATAACGACACTCTTGAAAGTTTAAAAGAATGGCGGAAATATCAAAATGACG
GTGCTATATCCTTGCATGACTCTTTAGTCTTCTCATATCATCAAAAAATGAGGTCTTATGAAATAGAGAGACAGAAATTA
GTGAGACACTTCAAAAATGCTGGAGTACCTAACATTGGCTTTCACGGTTTCCGTCATACTCACGCTAGTCTTTTGATGAA
CAACGATGTTAACCCTAAAGAGATACAAAGACGATTAGGACATGCAGATTATGCTATCACAATGAATACATATAGCCACC
TTGCCAAAAGTAAAGAAAAAGAGACCGCTGAAAAGTTCAGCAGTATCTTAAAAGCATTATGA

Upstream 100 bases:

>100_bases
CCGGTTAACTAAATAATCGTATAAGCTCTAATAATAATATTTCTCAATCCTCGTACATGCCTTGCCTGACATTAGTACAA
AATGGAAAGGAAGAAATAAT

Downstream 100 bases:

>100_bases
TTTTTTGGTCGAACGTAGTAAAAAGCGTTAAAATTTGTGTTTATAATCTCTACAACCCTTATATATCAAGGATTTAAGCT
CTATATTTTAACATAGTTCT

Product: phage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MNIKEYTKKDGTKVYRTNVYLGVDNLTGKQVRTSVTAKSKKMCETKAHQAINDFINNGSTIAREKVVFDNFEALALSWFE
SYKLTVKENSISVADNYLRNYILPPIGSYKLSKITPMLLQELVNKWANNANTAEIINGKRERGKCKDYKLLLNFIKRILD
YGMQLGAIEDNSAIKVFPPKLKTRTVKKIKYFDNEELKQFLLYLDTLEPSTDNRKSKTLYKLLLATGLRVGEAMALSWSD
IDFNNHYLSVSKTLIQQSNLIQDSAKTKESNRSVFLDNDTLESLKEWRKYQNDGAISLHDSLVFSYHQKMRSYEIERQKL
VRHFKNAGVPNIGFHGFRHTHASLLMNNDVNPKEIQRRLGHADYAITMNTYSHLAKSKEKETAEKFSSILKAL

Sequences:

>Translated_393_residues
MNIKEYTKKDGTKVYRTNVYLGVDNLTGKQVRTSVTAKSKKMCETKAHQAINDFINNGSTIAREKVVFDNFEALALSWFE
SYKLTVKENSISVADNYLRNYILPPIGSYKLSKITPMLLQELVNKWANNANTAEIINGKRERGKCKDYKLLLNFIKRILD
YGMQLGAIEDNSAIKVFPPKLKTRTVKKIKYFDNEELKQFLLYLDTLEPSTDNRKSKTLYKLLLATGLRVGEAMALSWSD
IDFNNHYLSVSKTLIQQSNLIQDSAKTKESNRSVFLDNDTLESLKEWRKYQNDGAISLHDSLVFSYHQKMRSYEIERQKL
VRHFKNAGVPNIGFHGFRHTHASLLMNNDVNPKEIQRRLGHADYAITMNTYSHLAKSKEKETAEKFSSILKAL
>Mature_393_residues
MNIKEYTKKDGTKVYRTNVYLGVDNLTGKQVRTSVTAKSKKMCETKAHQAINDFINNGSTIAREKVVFDNFEALALSWFE
SYKLTVKENSISVADNYLRNYILPPIGSYKLSKITPMLLQELVNKWANNANTAEIINGKRERGKCKDYKLLLNFIKRILD
YGMQLGAIEDNSAIKVFPPKLKTRTVKKIKYFDNEELKQFLLYLDTLEPSTDNRKSKTLYKLLLATGLRVGEAMALSWSD
IDFNNHYLSVSKTLIQQSNLIQDSAKTKESNRSVFLDNDTLESLKEWRKYQNDGAISLHDSLVFSYHQKMRSYEIERQKL
VRHFKNAGVPNIGFHGFRHTHASLLMNNDVNPKEIQRRLGHADYAITMNTYSHLAKSKEKETAEKFSSILKAL

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 45232; Mature: 45232

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKEYTKKDGTKVYRTNVYLGVDNLTGKQVRTSVTAKSKKMCETKAHQAINDFINNGST
CCCHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
IAREKVVFDNFEALALSWFESYKLTVKENSISVADNYLRNYILPPIGSYKLSKITPMLLQ
HHHHHHHHCCHHHHHHHHHHHEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
ELVNKWANNANTAEIINGKRERGKCKDYKLLLNFIKRILDYGMQLGAIEDNSAIKVFPPK
HHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEECCC
LKTRTVKKIKYFDNEELKQFLLYLDTLEPSTDNRKSKTLYKLLLATGLRVGEAMALSWSD
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECC
IDFNNHYLSVSKTLIQQSNLIQDSAKTKESNRSVFLDNDTLESLKEWRKYQNDGAISLHD
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEHH
SLVFSYHQKMRSYEIERQKLVRHFKNAGVPNIGFHGFRHTHASLLMNNDVNPKEIQRRLG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCC
HADYAITMNTYSHLAKSKEKETAEKFSSILKAL
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIKEYTKKDGTKVYRTNVYLGVDNLTGKQVRTSVTAKSKKMCETKAHQAINDFINNGST
CCCHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
IAREKVVFDNFEALALSWFESYKLTVKENSISVADNYLRNYILPPIGSYKLSKITPMLLQ
HHHHHHHHCCHHHHHHHHHHHEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
ELVNKWANNANTAEIINGKRERGKCKDYKLLLNFIKRILDYGMQLGAIEDNSAIKVFPPK
HHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEECCC
LKTRTVKKIKYFDNEELKQFLLYLDTLEPSTDNRKSKTLYKLLLATGLRVGEAMALSWSD
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECC
IDFNNHYLSVSKTLIQQSNLIQDSAKTKESNRSVFLDNDTLESLKEWRKYQNDGAISLHD
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEHH
SLVFSYHQKMRSYEIERQKLVRHFKNAGVPNIGFHGFRHTHASLLMNNDVNPKEIQRRLG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCC
HADYAITMNTYSHLAKSKEKETAEKFSSILKAL
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]