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The map label for this gene is ps460

Identifier: 125624855

GI number: 125624855

Start: 2065277

End: 2065738

Strand: Reverse

Name: ps460

Synonym: llmg_2083

Alternate gene names: NA

Gene position: 2065738-2065277 (Counterclockwise)

Preceding gene: 125624856

Following gene: 125624854

Centisome position: 81.67

GC content: 35.93

Gene sequence:

>462_bases
ATGGATCAAAATTTAATGACAATCTTTAGCGGCGTTTTAACTTTAGTAGGAACAGTAGTGTCTTACTTCATCTCACAAGC
AGCTAAAAAGCATAGCAATGTAAAAAATATCGATGCTTTAGCTAAATTGGCAAATCAAGGAGTGACTTGGGCAGAAAAGA
ACTTCAACGAGAATCCTGAGAAGTTGTCTGAAGCTATTAACTATGTGACAGAAGAGGCTAAACGAATTAAAATAAAAACC
AATCCCGCTCAGATTGAAGCTCAGATTGAAACATCATTAGCTCAGTTGAAAAAGAATTTCACTTCTGACCCGATTAAAAC
TGTTAAAGAGGTTACTGAAAAAGCAGTTGAAGTTACTGGTCAAGTTGCTCAAGCAACGCAGAAAGCGGCTGACATTATTT
TTCCAATTATTGAAGAAGTAGAAAAATCAGAATCAACAGAACCAACAGAACAAGGAGAATGA

Upstream 100 bases:

>100_bases
CTTTTGGAAATTGATTTTCGGAATTGGCGGAGCTTCAGCGGCCATATATACGATTATCATGGAAGTTATAAAATTAATTA
AATAAAAGAGGAAAAATAAA

Downstream 100 bases:

>100_bases
TATGAACGGAATTGACATTTCCAGCTATCAAGCAGAATTAAATGCTGGAATTGTTCCCTCAGATTTCGTCATTATAAAGG
CCACAGAGGGAACTAACTAT

Product: bacteriophage holin

Products: NA

Alternate protein names: Phage Holin

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MDQNLMTIFSGVLTLVGTVVSYFISQAAKKHSNVKNIDALAKLANQGVTWAEKNFNENPEKLSEAINYVTEEAKRIKIKT
NPAQIEAQIETSLAQLKKNFTSDPIKTVKEVTEKAVEVTGQVAQATQKAADIIFPIIEEVEKSESTEPTEQGE

Sequences:

>Translated_153_residues
MDQNLMTIFSGVLTLVGTVVSYFISQAAKKHSNVKNIDALAKLANQGVTWAEKNFNENPEKLSEAINYVTEEAKRIKIKT
NPAQIEAQIETSLAQLKKNFTSDPIKTVKEVTEKAVEVTGQVAQATQKAADIIFPIIEEVEKSESTEPTEQGE
>Mature_153_residues
MDQNLMTIFSGVLTLVGTVVSYFISQAAKKHSNVKNIDALAKLANQGVTWAEKNFNENPEKLSEAINYVTEEAKRIKIKT
NPAQIEAQIETSLAQLKKNFTSDPIKTVKEVTEKAVEVTGQVAQATQKAADIIFPIIEEVEKSESTEPTEQGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16852; Mature: 16852

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQNLMTIFSGVLTLVGTVVSYFISQAAKKHSNVKNIDALAKLANQGVTWAEKNFNENPE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHCCCCCHH
KLSEAINYVTEEAKRIKIKTNPAQIEAQIETSLAQLKKNFTSDPIKTVKEVTEKAVEVTG
HHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
QVAQATQKAADIIFPIIEEVEKSESTEPTEQGE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDQNLMTIFSGVLTLVGTVVSYFISQAAKKHSNVKNIDALAKLANQGVTWAEKNFNENPE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHCCCCCHH
KLSEAINYVTEEAKRIKIKTNPAQIEAQIETSLAQLKKNFTSDPIKTVKEVTEKAVEVTG
HHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
QVAQATQKAADIIFPIIEEVEKSESTEPTEQGE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA