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The map label for this gene is pstD [H]

Identifier: 125624682

GI number: 125624682

Start: 1877477

End: 1878400

Strand: Reverse

Name: pstD [H]

Synonym: llmg_1899

Alternate gene names: 125624682

Gene position: 1878400-1877477 (Counterclockwise)

Preceding gene: 125624683

Following gene: 125624681

Centisome position: 74.26

GC content: 41.99

Gene sequence:

>924_bases
ATGGAAAATTCAAAAATCAAAGAAAAATTGCTTTCAAGCAATAAAAATTCAAGGCTTGAAAAATTTGGTAAGAGTTTGAC
GTTCTTATGTATTGCCCTCATTGTCTTCGTTGTAGGTGCAATCCTCGTCTTTGTTGCTCAAAAAGGTCTGTCAACTTTTT
ATTCAGATGGCGTAAATCCTTTCCGCTTCCTCTTTGGAACCAACTGGTCACCAGGTAATCTTGGACCAGATGGTAAACCT
GCAGTTGGGGCTTTGCCAATGTTTGCGGGTTCATTGATTGTTACGGTACTTTCTGCACTTGTTGCCACACCTTTTGCGAT
TGGTGCAGGAATTTACATGACAGAAATCTCACCAAAATATGGTAAAAAAATCTTGCAACCTGTCATTGAACTCCTTGTAG
GGATTCCGTCAGTAGTTTATGGTTTCATTGGTTTGACCGTTGTCGTGCCTGCCATTCGTAACGTTTTTGGCGGAACAGGT
TTGGGACTTTTGTCAGGTGTGTTTGTGCTCTTTGTCATGATTTTGCCAACTGTAACTTCGATGACCGTGGACGCTATGAA
AGCTGTCCCTTCTTATTATAAAGAAGCATCACTCGGACTTGGTGCCACACGCTGGCAAACGATTTGGCGTGTTCTCTTAC
GTGCGGCTACACCAGGAATTTTGACTGCGGTTATCTTTGGAATGGCGCGTGCCTTTGGTGAAGCTTTGGCTATTCAAATG
GTCGTTGGTAATGCGGTCATGATGCCAAAAGATTTGATTTCACCAGCTTCAACCTTGACATCAATCTTGACTTCAGGAAT
TCCTAATGCAACACCTGGTATTCAATTGAATGCACTTTGGTCGCTTGCCTTACTCCTTTTGATTATGTCACTCTTTTTCA
ACCTCGCAATGCGTGCTATTGCTAAGAAAGGAAGTCTTAAATAA

Upstream 100 bases:

>100_bases
AATAGTCAGCTTTAATATACTTTAAAAATAAAGTTTTAAGTGAAAAAAAATTTTGCATTATCAAATAAAATATAAATCAA
CAAAAAATAGTTAGGTCCTT

Downstream 100 bases:

>100_bases
TGAACGCTAAACGCTCTGACAAGATTGCCACTGGTGTCCTTTACGTCCTTTCTGGCATCATTGTGCTTATCCTCGCTTTT
TTACTGGCATATATTTTAGT

Product: phosphate transport system permease protein pstD

Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MENSKIKEKLLSSNKNSRLEKFGKSLTFLCIALIVFVVGAILVFVAQKGLSTFYSDGVNPFRFLFGTNWSPGNLGPDGKP
AVGALPMFAGSLIVTVLSALVATPFAIGAGIYMTEISPKYGKKILQPVIELLVGIPSVVYGFIGLTVVVPAIRNVFGGTG
LGLLSGVFVLFVMILPTVTSMTVDAMKAVPSYYKEASLGLGATRWQTIWRVLLRAATPGILTAVIFGMARAFGEALAIQM
VVGNAVMMPKDLISPASTLTSILTSGIPNATPGIQLNALWSLALLLLIMSLFFNLAMRAIAKKGSLK

Sequences:

>Translated_307_residues
MENSKIKEKLLSSNKNSRLEKFGKSLTFLCIALIVFVVGAILVFVAQKGLSTFYSDGVNPFRFLFGTNWSPGNLGPDGKP
AVGALPMFAGSLIVTVLSALVATPFAIGAGIYMTEISPKYGKKILQPVIELLVGIPSVVYGFIGLTVVVPAIRNVFGGTG
LGLLSGVFVLFVMILPTVTSMTVDAMKAVPSYYKEASLGLGATRWQTIWRVLLRAATPGILTAVIFGMARAFGEALAIQM
VVGNAVMMPKDLISPASTLTSILTSGIPNATPGIQLNALWSLALLLLIMSLFFNLAMRAIAKKGSLK
>Mature_307_residues
MENSKIKEKLLSSNKNSRLEKFGKSLTFLCIALIVFVVGAILVFVAQKGLSTFYSDGVNPFRFLFGTNWSPGNLGPDGKP
AVGALPMFAGSLIVTVLSALVATPFAIGAGIYMTEISPKYGKKILQPVIELLVGIPSVVYGFIGLTVVVPAIRNVFGGTG
LGLLSGVFVLFVMILPTVTSMTVDAMKAVPSYYKEASLGLGATRWQTIWRVLLRAATPGILTAVIFGMARAFGEALAIQM
VVGNAVMMPKDLISPASTLTSILTSGIPNATPGIQLNALWSLALLLLIMSLFFNLAMRAIAKKGSLK

Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0573

COG function: function code P; ABC-type phosphate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790164, Length=250, Percent_Identity=29.2, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1790163, Length=177, Percent_Identity=28.2485875706215, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR011864 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32520; Mature: 32520

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENSKIKEKLLSSNKNSRLEKFGKSLTFLCIALIVFVVGAILVFVAQKGLSTFYSDGVNP
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
FRFLFGTNWSPGNLGPDGKPAVGALPMFAGSLIVTVLSALVATPFAIGAGIYMTEISPKY
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCHHH
GKKILQPVIELLVGIPSVVYGFIGLTVVVPAIRNVFGGTGLGLLSGVFVLFVMILPTVTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
MTVDAMKAVPSYYKEASLGLGATRWQTIWRVLLRAATPGILTAVIFGMARAFGEALAIQM
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VVGNAVMMPKDLISPASTLTSILTSGIPNATPGIQLNALWSLALLLLIMSLFFNLAMRAI
HHCCHHHCCHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AKKGSLK
HHCCCCC
>Mature Secondary Structure
MENSKIKEKLLSSNKNSRLEKFGKSLTFLCIALIVFVVGAILVFVAQKGLSTFYSDGVNP
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
FRFLFGTNWSPGNLGPDGKPAVGALPMFAGSLIVTVLSALVATPFAIGAGIYMTEISPKY
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCHHH
GKKILQPVIELLVGIPSVVYGFIGLTVVVPAIRNVFGGTGLGLLSGVFVLFVMILPTVTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
MTVDAMKAVPSYYKEASLGLGATRWQTIWRVLLRAATPGILTAVIFGMARAFGEALAIQM
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VVGNAVMMPKDLISPASTLTSILTSGIPNATPGIQLNALWSLALLLLIMSLFFNLAMRAI
HHCCHHHCCHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AKKGSLK
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; phosphate [Periplasm]; H2O [C]

Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760913; 8969508; 9384377 [H]