Click here to switch to the map view.

The map label for this gene is glgA [H]

Identifier: 125624660

GI number: 125624660

Start: 1853810

End: 1855282

Strand: Reverse

Name: glgA [H]

Synonym: llmg_1872

Alternate gene names: 125624660

Gene position: 1855282-1853810 (Counterclockwise)

Preceding gene: 125624661

Following gene: 125624659

Centisome position: 73.35

GC content: 35.23

Gene sequence:

>1473_bases
ATGGCAATTAGAGAAATGAAAAGAGAAAAAATGAAAGTTTTATTTGCGTCAAGTGAGTGTGCTCCCTTTTTCAAAACGGG
AGGACTTGGTGATGTAGCGGGAGCACTTCCAAAAGAGTTGGCTAAGAAAAGTGAGATTTCTTCTGTTGGTGTGATTTTAC
CTTATTTCAAAAATGAAATGAAAGAAGAATATCGTTCACTACTCGTCGATGAATTTTATGATTTTGTTGATGTAGGTTGG
CGGCATGAATATGTTGGAGTTAAAACCTTAGTAAAAGATAATGTAAAATATTATTTTTTAGATAATGAGCATTATTTTGG
TCGAGGGCAGATTTACGGTTATGGTGATGATGGAGAACGTTTTGCCTTTTTCGATTTAGCCGTTTGTCAGCTCTTAGAAA
AATTAGATTTTATTCCTGACATTTTGCATGTAAATGACTGGCAAACAGCCATGATTCCATTTTTACTTAAAGAAAAATAT
AAGTGGATTAACGCTTATTCCGATATACAGTCAGTTTTGACTATTCATAATATAGAATTTCAAGGTGTGATGCAAGGAGA
TGCCCTGACTGAACTATTCGGAATGGGAATGGAACGGTATTTTGAAGGGGTTGTTCGCCATAATGGAATGCTAAATATGT
TGAAAACAGGTATTTTGTATGCAGACCGGGTTAACACTGTCTCGCCTACGTATGCAAAGGAAATTCAAACATCAGAATTT
GGTGGTGGATTGGAAGGCGTTTTGCAGTATGTGAAAGGAAAGATTTCTGGGATTTTAAATGGGATTGATTATGAGATTTA
TGACCCAGAAAAAGATAAACAAATCTCATATCATTTCAATTCACTGGACCTTACAGGCAAAGCAAAGATGAAGGCAGAAT
TACAAAAAAGAGCATTTTTACCGATAAATCCTGATATTCCAGTAATTGGTATGGTTTCACGATTAACCAATCAAAAAGGA
TTTGATTTAGTGTTAAGCCAATTGGAAGAGCTTTTGAAAGAAGAGGTTCAAATTGTCTTACTAGGAACAGGTTTTCCAGA
ACTAGAAGAAGGATTTAAATATTTCGCACAAAAGTATCCTGATAAACTGTCGGCGAATATTGCTTTTGATTTGCAATTTG
CTCAAGAAATATATGCTGGTTCAGATCTATTTTTGATGCCATCGGCTTTTGAACCCTGTGGGTTATCTCAAATGATTGCT
ATGAGATATGGAACTTTACCGATTGTCCACGAGATAGGCGGACTAAGAGATACCGTAATTCCATTCAATCCTGTTACGAA
AGAGGGGACTGGTTTCGGTTTTATAGATTTTGACAGAGATATTTTATTAGAAACAATTAAACGTGCACTAGAAGTTTATA
AAAAGGAGCCAAAGACTTTAAACCGGATAATTGTATCCGCAATGGAACAAGATTTTTCGTGGGAAACGAAAGCACAGCAA
TACATTGAACTTTATCAAACAATATTAAAGTAA

Upstream 100 bases:

>100_bases
CAATAGTTATTCCAAAAGGCACCGTTGTGACTGCAGATATTTTATAAATATAAAAATAGCGCTGATATTCTTTATCGGCG
CTCTTGAGTAAACGTAAAAA

Downstream 100 bases:

>100_bases
CGCAAGCGTTTGCGTTGAGTACTAAAATGTGATAAAATTCTTTTTAAAATAAATGATGTTTGATTTTAAAAAAGGAGCGA
CGAGTGAAACTTTCTAAAAA

Product: glycogen synthase

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase [H]

Number of amino acids: Translated: 490; Mature: 489

Protein sequence:

>490_residues
MAIREMKREKMKVLFASSECAPFFKTGGLGDVAGALPKELAKKSEISSVGVILPYFKNEMKEEYRSLLVDEFYDFVDVGW
RHEYVGVKTLVKDNVKYYFLDNEHYFGRGQIYGYGDDGERFAFFDLAVCQLLEKLDFIPDILHVNDWQTAMIPFLLKEKY
KWINAYSDIQSVLTIHNIEFQGVMQGDALTELFGMGMERYFEGVVRHNGMLNMLKTGILYADRVNTVSPTYAKEIQTSEF
GGGLEGVLQYVKGKISGILNGIDYEIYDPEKDKQISYHFNSLDLTGKAKMKAELQKRAFLPINPDIPVIGMVSRLTNQKG
FDLVLSQLEELLKEEVQIVLLGTGFPELEEGFKYFAQKYPDKLSANIAFDLQFAQEIYAGSDLFLMPSAFEPCGLSQMIA
MRYGTLPIVHEIGGLRDTVIPFNPVTKEGTGFGFIDFDRDILLETIKRALEVYKKEPKTLNRIIVSAMEQDFSWETKAQQ
YIELYQTILK

Sequences:

>Translated_490_residues
MAIREMKREKMKVLFASSECAPFFKTGGLGDVAGALPKELAKKSEISSVGVILPYFKNEMKEEYRSLLVDEFYDFVDVGW
RHEYVGVKTLVKDNVKYYFLDNEHYFGRGQIYGYGDDGERFAFFDLAVCQLLEKLDFIPDILHVNDWQTAMIPFLLKEKY
KWINAYSDIQSVLTIHNIEFQGVMQGDALTELFGMGMERYFEGVVRHNGMLNMLKTGILYADRVNTVSPTYAKEIQTSEF
GGGLEGVLQYVKGKISGILNGIDYEIYDPEKDKQISYHFNSLDLTGKAKMKAELQKRAFLPINPDIPVIGMVSRLTNQKG
FDLVLSQLEELLKEEVQIVLLGTGFPELEEGFKYFAQKYPDKLSANIAFDLQFAQEIYAGSDLFLMPSAFEPCGLSQMIA
MRYGTLPIVHEIGGLRDTVIPFNPVTKEGTGFGFIDFDRDILLETIKRALEVYKKEPKTLNRIIVSAMEQDFSWETKAQQ
YIELYQTILK
>Mature_489_residues
AIREMKREKMKVLFASSECAPFFKTGGLGDVAGALPKELAKKSEISSVGVILPYFKNEMKEEYRSLLVDEFYDFVDVGWR
HEYVGVKTLVKDNVKYYFLDNEHYFGRGQIYGYGDDGERFAFFDLAVCQLLEKLDFIPDILHVNDWQTAMIPFLLKEKYK
WINAYSDIQSVLTIHNIEFQGVMQGDALTELFGMGMERYFEGVVRHNGMLNMLKTGILYADRVNTVSPTYAKEIQTSEFG
GGLEGVLQYVKGKISGILNGIDYEIYDPEKDKQISYHFNSLDLTGKAKMKAELQKRAFLPINPDIPVIGMVSRLTNQKGF
DLVLSQLEELLKEEVQIVLLGTGFPELEEGFKYFAQKYPDKLSANIAFDLQFAQEIYAGSDLFLMPSAFEPCGLSQMIAM
RYGTLPIVHEIGGLRDTVIPFNPVTKEGTGFGFIDFDRDILLETIKRALEVYKKEPKTLNRIIVSAMEQDFSWETKAQQY
IELYQTILK

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose [H]

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789836, Length=494, Percent_Identity=34.8178137651822, Blast_Score=282, Evalue=3e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.21 [H]

Molecular weight: Translated: 55972; Mature: 55841

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIREMKREKMKVLFASSECAPFFKTGGLGDVAGALPKELAKKSEISSVGVILPYFKNEM
CCHHHHHHHHHHEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHH
KEEYRSLLVDEFYDFVDVGWRHEYVGVKTLVKDNVKYYFLDNEHYFGRGQIYGYGDDGER
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCEEECCCEEEEECCCCCE
FAFFDLAVCQLLEKLDFIPDILHVNDWQTAMIPFLLKEKYKWINAYSDIQSVLTIHNIEF
EEHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
QGVMQGDALTELFGMGMERYFEGVVRHNGMLNMLKTGILYADRVNTVSPTYAKEIQTSEF
EEEECCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHCCEEECCCCCCCCHHHHHCCHHHC
GGGLEGVLQYVKGKISGILNGIDYEIYDPEKDKQISYHFNSLDLTGKAKMKAELQKRAFL
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCC
PINPDIPVIGMVSRLTNQKGFDLVLSQLEELLKEEVQIVLLGTGFPELEEGFKYFAQKYP
CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCC
DKLSANIAFDLQFAQEIYAGSDLFLMPSAFEPCGLSQMIAMRYGTLPIVHEIGGLRDTVI
CHHCCCEEEEHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCC
PFNPVTKEGTGFGFIDFDRDILLETIKRALEVYKKEPKTLNRIIVSAMEQDFSWETKAQQ
CCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHH
YIELYQTILK
HHHHHHHHHC
>Mature Secondary Structure 
AIREMKREKMKVLFASSECAPFFKTGGLGDVAGALPKELAKKSEISSVGVILPYFKNEM
CHHHHHHHHHHEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHH
KEEYRSLLVDEFYDFVDVGWRHEYVGVKTLVKDNVKYYFLDNEHYFGRGQIYGYGDDGER
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCEEECCCEEEEECCCCCE
FAFFDLAVCQLLEKLDFIPDILHVNDWQTAMIPFLLKEKYKWINAYSDIQSVLTIHNIEF
EEHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
QGVMQGDALTELFGMGMERYFEGVVRHNGMLNMLKTGILYADRVNTVSPTYAKEIQTSEF
EEEECCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHCCEEECCCCCCCCHHHHHCCHHHC
GGGLEGVLQYVKGKISGILNGIDYEIYDPEKDKQISYHFNSLDLTGKAKMKAELQKRAFL
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCC
PINPDIPVIGMVSRLTNQKGFDLVLSQLEELLKEEVQIVLLGTGFPELEEGFKYFAQKYP
CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCC
DKLSANIAFDLQFAQEIYAGSDLFLMPSAFEPCGLSQMIAMRYGTLPIVHEIGGLRDTVI
CHHCCCEEEEHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCC
PFNPVTKEGTGFGFIDFDRDILLETIKRALEVYKKEPKTLNRIIVSAMEQDFSWETKAQQ
CCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHH
YIELYQTILK
HHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]