| Definition | Lactococcus lactis subsp. cremoris MG1363, complete genome. |
|---|---|
| Accession | NC_009004 |
| Length | 2,529,478 |
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The map label for this gene is menB [H]
Identifier: 125624620
GI number: 125624620
Start: 1811711
End: 1812553
Strand: Direct
Name: menB [H]
Synonym: llmg_1831
Alternate gene names: 125624620
Gene position: 1811711-1812553 (Clockwise)
Preceding gene: 125624619
Following gene: 125624621
Centisome position: 71.62
GC content: 42.47
Gene sequence:
>843_bases ATGTCAAAATTTAACTGGGTTGCCCTTAATCGTAACTACGAAGATATTATTTATGAAACTTATAATGGAATTGCTAAGAT TACCATTAATCGTCCTGAAGTTCGCAATGCTTTTCGTCCAAAAACAGTCGTTGAAATGATTGACGCTTTTAGTATTGCAC GTGATGACACAAATGTCGGTGTCATTATTTTAACCGGTGCTAATCATGGCAAAGGTGAAGATAAAGAAGCCTTTTGTTCT GGTGGCGACCAAAAAGTTCGTGGAAATGGTGGTTATGTTGGTGAAGACCAAATTCCTCGTTTGAATGTTTTAGATTTACA ACATTTGATTCGGATTACGCCAAAACCTGTTATTGCCATGGTCAATGGTTTTGCCATCGGCGGAGGTCATGTTTTACATA TCGTTTGTGACTTGACCATCGCTTCTGAAAATGCTAAATTCGGACAAACTGGTCCACGTGTTGGTTCATTTGATGCTGGT TATGGTGCTGGTTTGCTGGCGGCCATGGTTGGTCAAAAGAAAGCGCGTGAAATCTGGTTCCTCTGCCGTCAATATACTGC CAAAGAAGCAATGGACATGGGCATGGTCAATACAGTTGTACCTTTTGACCGTCTTGAAGAAGAAACTGTTCAATGGGCCG AAGAAATGCTCGCCCTCTCACCAATGGCCCTCCGTATGCTCAAAGGTTCAATGAATGCAGCGACTGACGGACTTGCTGGA CTGCAACAATTTGCGGGAGACGCAACACTCATGTTCTATACCACTGATGAAGCCAAAGAAGGGCGCGACGCTTTCAAAGA AAAACGCAAACCTGATTTTGACCAATTTCCAAAATTCCCATAA
Upstream 100 bases:
>100_bases ATGAAAATAGATAAAATGGAACCTGGGCGGTGCCCAGAACCTCATTTTTCTAATTTTCATAACTTCTAAACGCTCGCCCT CACATCTTAAAGGAGAAATC
Downstream 100 bases:
>100_bases ACTTTTTAAAAATTGCTGATAAAGCGTCATTTTGGCGCTTTTTGTGATTTAAAGTTACTGACAGCTTTTTAAAATTATGA AAAATTACTGACAAGATTTC
Product: naphthoate synthase
Products: NA
Alternate protein names: DHNA-CoA synthase [H]
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MSKFNWVALNRNYEDIIYETYNGIAKITINRPEVRNAFRPKTVVEMIDAFSIARDDTNVGVIILTGANHGKGEDKEAFCS GGDQKVRGNGGYVGEDQIPRLNVLDLQHLIRITPKPVIAMVNGFAIGGGHVLHIVCDLTIASENAKFGQTGPRVGSFDAG YGAGLLAAMVGQKKAREIWFLCRQYTAKEAMDMGMVNTVVPFDRLEEETVQWAEEMLALSPMALRMLKGSMNAATDGLAG LQQFAGDATLMFYTTDEAKEGRDAFKEKRKPDFDQFPKFP
Sequences:
>Translated_280_residues MSKFNWVALNRNYEDIIYETYNGIAKITINRPEVRNAFRPKTVVEMIDAFSIARDDTNVGVIILTGANHGKGEDKEAFCS GGDQKVRGNGGYVGEDQIPRLNVLDLQHLIRITPKPVIAMVNGFAIGGGHVLHIVCDLTIASENAKFGQTGPRVGSFDAG YGAGLLAAMVGQKKAREIWFLCRQYTAKEAMDMGMVNTVVPFDRLEEETVQWAEEMLALSPMALRMLKGSMNAATDGLAG LQQFAGDATLMFYTTDEAKEGRDAFKEKRKPDFDQFPKFP >Mature_279_residues SKFNWVALNRNYEDIIYETYNGIAKITINRPEVRNAFRPKTVVEMIDAFSIARDDTNVGVIILTGANHGKGEDKEAFCSG GDQKVRGNGGYVGEDQIPRLNVLDLQHLIRITPKPVIAMVNGFAIGGGHVLHIVCDLTIASENAKFGQTGPRVGSFDAGY GAGLLAAMVGQKKAREIWFLCRQYTAKEAMDMGMVNTVVPFDRLEEETVQWAEEMLALSPMALRMLKGSMNAATDGLAGL QQFAGDATLMFYTTDEAKEGRDAFKEKRKPDFDQFPKFP
Specific function: Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) [H]
COG id: COG0447
COG function: function code H; Dihydroxynaphthoic acid synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=268, Percent_Identity=33.5820895522388, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI31542718, Length=267, Percent_Identity=28.8389513108614, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI45643119, Length=221, Percent_Identity=27.1493212669683, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI260275230, Length=221, Percent_Identity=27.1493212669683, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI260274832, Length=221, Percent_Identity=27.1493212669683, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI4502327, Length=269, Percent_Identity=28.2527881040892, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI4757966, Length=224, Percent_Identity=25.4464285714286, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI51538581, Length=224, Percent_Identity=25.4464285714286, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI25453481, Length=224, Percent_Identity=25.4464285714286, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI51538573, Length=224, Percent_Identity=25.4464285714286, Blast_Score=69, Evalue=5e-12, Organism=Escherichia coli, GI1788597, Length=277, Percent_Identity=63.5379061371841, Blast_Score=360, Evalue=1e-101, Organism=Escherichia coli, GI1787659, Length=263, Percent_Identity=30.7984790874525, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI221142681, Length=265, Percent_Identity=30.188679245283, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI87082183, Length=270, Percent_Identity=27.4074074074074, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1787660, Length=267, Percent_Identity=29.2134831460674, Blast_Score=77, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17554946, Length=254, Percent_Identity=32.2834645669291, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI25145438, Length=253, Percent_Identity=32.4110671936759, Blast_Score=107, Evalue=9e-24, Organism=Caenorhabditis elegans, GI17540714, Length=232, Percent_Identity=27.5862068965517, Blast_Score=81, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17549921, Length=224, Percent_Identity=25.8928571428571, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17560910, Length=197, Percent_Identity=28.9340101522843, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17535521, Length=209, Percent_Identity=25.3588516746411, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI20129971, Length=277, Percent_Identity=31.7689530685921, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI24653477, Length=277, Percent_Identity=31.7689530685921, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI24653139, Length=258, Percent_Identity=29.4573643410853, Blast_Score=94, Evalue=7e-20, Organism=Drosophila melanogaster, GI21357171, Length=195, Percent_Identity=30.2564102564103, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI19922422, Length=266, Percent_Identity=24.4360902255639, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI24650670, Length=193, Percent_Identity=31.0880829015544, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 - InterPro: IPR010198 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.1.3.36 [H]
Molecular weight: Translated: 30895; Mature: 30764
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFNWVALNRNYEDIIYETYNGIAKITINRPEVRNAFRPKTVVEMIDAFSIARDDTNVG CCCCEEEEECCCHHHHHHHHCCCEEEEEECCHHHHHCCCHHHHHHHHHHHHHHCCCCCEE VIILTGANHGKGEDKEAFCSGGDQKVRGNGGYVGEDQIPRLNVLDLQHLIRITPKPVIAM EEEEECCCCCCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCHHEEE VNGFAIGGGHVLHIVCDLTIASENAKFGQTGPRVGSFDAGYGAGLLAAMVGQKKAREIWF ECCEEECCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHH LCRQYTAKEAMDMGMVNTVVPFDRLEEETVQWAEEMLALSPMALRMLKGSMNAATDGLAG HHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LQQFAGDATLMFYTTDEAKEGRDAFKEKRKPDFDQFPKFP HHHHCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHCCCCC >Mature Secondary Structure SKFNWVALNRNYEDIIYETYNGIAKITINRPEVRNAFRPKTVVEMIDAFSIARDDTNVG CCCEEEEECCCHHHHHHHHCCCEEEEEECCHHHHHCCCHHHHHHHHHHHHHHCCCCCEE VIILTGANHGKGEDKEAFCSGGDQKVRGNGGYVGEDQIPRLNVLDLQHLIRITPKPVIAM EEEEECCCCCCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCHHEEE VNGFAIGGGHVLHIVCDLTIASENAKFGQTGPRVGSFDAGYGAGLLAAMVGQKKAREIWF ECCEEECCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHH LCRQYTAKEAMDMGMVNTVVPFDRLEEETVQWAEEMLALSPMALRMLKGSMNAATDGLAG HHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LQQFAGDATLMFYTTDEAKEGRDAFKEKRKPDFDQFPKFP HHHHCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1629163; 8566759; 9387221; 9384377 [H]