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The map label for this gene is ykrA [H]

Identifier: 125624611

GI number: 125624611

Start: 1801934

End: 1803322

Strand: Reverse

Name: ykrA [H]

Synonym: llmg_1822

Alternate gene names: 125624611

Gene position: 1803322-1801934 (Counterclockwise)

Preceding gene: 125624613

Following gene: 125624610

Centisome position: 71.29

GC content: 38.95

Gene sequence:

>1389_bases
ATGGATATAAAAGCAGTATTTTTTGATTTAGATGGAACCCTATTTACTTCAACCCGTGGAGTAGCAACGAGTACCCGCAA
AGCCATACAAGAGCTTCGCCAAAAAGATATTTTTGTTGGAATTGCCACAGGACGTGGACCTGCTTTTGTGATGCCTTTGC
TAGAGGATTTAGACTTAGACTTTGCAGTCACTTATAATGGTCAGTATATATTCACCCCCAAAGAAGTCATTTTCCAAAAT
CCTTTAGAACAAAAAACCTTAAAGAAATTAATGAATTATGCGACAGAAAATCATTCGGACATCTCTTTAGGGACGGCACA
TGGTGTGAACGGTTCAGGCTTGTTAAAGTTTGGAGAAACGCGGCTAGCAAGCTTTCTATCAGGAGTCTTGCCCTCTGGAA
CCTCCGGAGTCGCTAGAAACAGTTTCAAACATGTCATTCGCCGCGTTTTACCACAAAATTCAAAACTGGCGGATAACGAA
GAAGAATTTATATATCAGGCTATGATGGTAGCTACAAGAAATGAAACAGCTCGTTTGCAAGAAGCCTTTCCAGAACTTTT
GGTTACCAGAAGTAATCCCTATTCTGTTGATTTAATTTCGGAATCAGGAGGAAAATTGCCAGGGATTCAGCGCTTAGGCG
AACGCTTTGGTTTTAACTTAGAACAAGTGATGTGTTTTGGTGATTCTGAAAATGATTTGACAATGGTTTCTGGTGTGGGT
TGTGGGATTGCTATGGGGAATGCTGTAGCCGAGGTAAAAAAAGTTGCGACTTATGTTACGGATACCAATAACCAAGATGG
AATTGCTAAAGCTCTTGCCTACCATGGTTTAATTCATTATTCAGTTGAAAAAGATTTTGTATCAAAAGATCAAAATTTCA
ATAAAGTTAAAGATTTCCATCGTCTAATGGATGGCAAAACACAAGAAGTTCCAAGAGCTTTTCCGCCAACAGAAGCAGGA
TTCCGTGCTGATTTTAAAGTTGAAGAGATTGTTGAGTTTCTCTATGCTTCCGCTGATGGAAATCAAGAAAAATTCACAGA
ATTAGTCGAAAATTTACATCAAGCAGTGGACAAAGCGGCAGATAAGGTCAAGTCGAAAGAACACAAAGAAGACAGCTTAA
CCGGACAAGTAGATGCGATGATTGATTTACTTTATTTCACTTATGGCTCACTCGTCCTTTCTGGAATTGACCCTTATGAA
ATTTTTAATGCTGTCCATCAAGCAAATATGGGTAAAATTTTCCCAGATGGCCGTCCACATTTTGATCCAGTGACCCATAA
GGTCTTGAAGCCGGAAGATTGGGAAGAAAAATTTGCTCCAGAAGGAAAAATAAAAAAAGAGCTTGAACGGCAAAAAAGAG
TCGCTGCGAAAAAACATAAAACTAAATAA

Upstream 100 bases:

>100_bases
ACTCCAGAAAAAAATAACTAATAAATGAAATAGATTTAAAATTACTGTATAATTTAGATAATAAATGAAAGCTGTATCAG
AGCTAGAAAAGATTTGAGAG

Downstream 100 bases:

>100_bases
AAGCATTCATTCTAATGAAATTAAATTTTATAAAAAACAACTGCTAAAGAAGGTGAAGCGACTGTCTTAGCTGAATCCAC
AGCCATAGCTATTGAAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MDIKAVFFDLDGTLFTSTRGVATSTRKAIQELRQKDIFVGIATGRGPAFVMPLLEDLDLDFAVTYNGQYIFTPKEVIFQN
PLEQKTLKKLMNYATENHSDISLGTAHGVNGSGLLKFGETRLASFLSGVLPSGTSGVARNSFKHVIRRVLPQNSKLADNE
EEFIYQAMMVATRNETARLQEAFPELLVTRSNPYSVDLISESGGKLPGIQRLGERFGFNLEQVMCFGDSENDLTMVSGVG
CGIAMGNAVAEVKKVATYVTDTNNQDGIAKALAYHGLIHYSVEKDFVSKDQNFNKVKDFHRLMDGKTQEVPRAFPPTEAG
FRADFKVEEIVEFLYASADGNQEKFTELVENLHQAVDKAADKVKSKEHKEDSLTGQVDAMIDLLYFTYGSLVLSGIDPYE
IFNAVHQANMGKIFPDGRPHFDPVTHKVLKPEDWEEKFAPEGKIKKELERQKRVAAKKHKTK

Sequences:

>Translated_462_residues
MDIKAVFFDLDGTLFTSTRGVATSTRKAIQELRQKDIFVGIATGRGPAFVMPLLEDLDLDFAVTYNGQYIFTPKEVIFQN
PLEQKTLKKLMNYATENHSDISLGTAHGVNGSGLLKFGETRLASFLSGVLPSGTSGVARNSFKHVIRRVLPQNSKLADNE
EEFIYQAMMVATRNETARLQEAFPELLVTRSNPYSVDLISESGGKLPGIQRLGERFGFNLEQVMCFGDSENDLTMVSGVG
CGIAMGNAVAEVKKVATYVTDTNNQDGIAKALAYHGLIHYSVEKDFVSKDQNFNKVKDFHRLMDGKTQEVPRAFPPTEAG
FRADFKVEEIVEFLYASADGNQEKFTELVENLHQAVDKAADKVKSKEHKEDSLTGQVDAMIDLLYFTYGSLVLSGIDPYE
IFNAVHQANMGKIFPDGRPHFDPVTHKVLKPEDWEEKFAPEGKIKKELERQKRVAAKKHKTK
>Mature_462_residues
MDIKAVFFDLDGTLFTSTRGVATSTRKAIQELRQKDIFVGIATGRGPAFVMPLLEDLDLDFAVTYNGQYIFTPKEVIFQN
PLEQKTLKKLMNYATENHSDISLGTAHGVNGSGLLKFGETRLASFLSGVLPSGTSGVARNSFKHVIRRVLPQNSKLADNE
EEFIYQAMMVATRNETARLQEAFPELLVTRSNPYSVDLISESGGKLPGIQRLGERFGFNLEQVMCFGDSENDLTMVSGVG
CGIAMGNAVAEVKKVATYVTDTNNQDGIAKALAYHGLIHYSVEKDFVSKDQNFNKVKDFHRLMDGKTQEVPRAFPPTEAG
FRADFKVEEIVEFLYASADGNQEKFTELVENLHQAVDKAADKVKSKEHKEDSLTGQVDAMIDLLYFTYGSLVLSGIDPYE
IFNAVHQANMGKIFPDGRPHFDPVTHKVLKPEDWEEKFAPEGKIKKELERQKRVAAKKHKTK

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=286, Percent_Identity=27.6223776223776, Blast_Score=99, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 51492; Mature: 51492

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKAVFFDLDGTLFTSTRGVATSTRKAIQELRQKDIFVGIATGRGPAFVMPLLEDLDLD
CCCEEEEEECCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCCCCEEHHHHHHHCCCC
FAVTYNGQYIFTPKEVIFQNPLEQKTLKKLMNYATENHSDISLGTAHGVNGSGLLKFGET
EEEEECCEEEECCHHHHHCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEHHHH
RLASFLSGVLPSGTSGVARNSFKHVIRRVLPQNSKLADNEEEFIYQAMMVATRNETARLQ
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH
EAFPELLVTRSNPYSVDLISESGGKLPGIQRLGERFGFNLEQVMCFGDSENDLTMVSGVG
HHHHHHEEECCCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHEEEECCCCCCEEEEECCC
CGIAMGNAVAEVKKVATYVTDTNNQDGIAKALAYHGLIHYSVEKDFVSKDQNFNKVKDFH
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEHHHHHHHCCCCHHHHHHHH
RLMDGKTQEVPRAFPPTEAGFRADFKVEEIVEFLYASADGNQEKFTELVENLHQAVDKAA
HHHCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
DKVKSKEHKEDSLTGQVDAMIDLLYFTYGSLVLSGIDPYEIFNAVHQANMGKIFPDGRPH
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC
FDPVTHKVLKPEDWEEKFAPEGKIKKELERQKRVAAKKHKTK
CCHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDIKAVFFDLDGTLFTSTRGVATSTRKAIQELRQKDIFVGIATGRGPAFVMPLLEDLDLD
CCCEEEEEECCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCCCCEEHHHHHHHCCCC
FAVTYNGQYIFTPKEVIFQNPLEQKTLKKLMNYATENHSDISLGTAHGVNGSGLLKFGET
EEEEECCEEEECCHHHHHCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEHHHH
RLASFLSGVLPSGTSGVARNSFKHVIRRVLPQNSKLADNEEEFIYQAMMVATRNETARLQ
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH
EAFPELLVTRSNPYSVDLISESGGKLPGIQRLGERFGFNLEQVMCFGDSENDLTMVSGVG
HHHHHHEEECCCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHEEEECCCCCCEEEEECCC
CGIAMGNAVAEVKKVATYVTDTNNQDGIAKALAYHGLIHYSVEKDFVSKDQNFNKVKDFH
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEHHHHHHHCCCCHHHHHHHH
RLMDGKTQEVPRAFPPTEAGFRADFKVEEIVEFLYASADGNQEKFTELVENLHQAVDKAA
HHHCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
DKVKSKEHKEDSLTGQVDAMIDLLYFTYGSLVLSGIDPYEIFNAVHQANMGKIFPDGRPH
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC
FDPVTHKVLKPEDWEEKFAPEGKIKKELERQKRVAAKKHKTK
CCHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]