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The map label for this gene is ftsY [H]

Identifier: 125624534

GI number: 125624534

Start: 1725640

End: 1727019

Strand: Reverse

Name: ftsY [H]

Synonym: llmg_1744

Alternate gene names: 125624534

Gene position: 1727019-1725640 (Counterclockwise)

Preceding gene: 125624535

Following gene: 125624533

Centisome position: 68.28

GC content: 36.16

Gene sequence:

>1380_bases
ATGGGACTTTTTGACCGACTCTTCGGAAAGAAGAAACAAGAGGAAACTAATCATGATGTGCCTGTCAGTGAAAATCAGTC
TAGTGAAATCACTGAAGCAGTCAAGAATGAAAAAGAAAATGAAACTGCTAAACGGCCTGAGGTAACTGAAAAGCCAGTAA
AAGTAGAAAAAGTTACTGACGAGTCTGTCAGTAAAATGATTGATGTTAAGCCAGAAATTACGGATGAACCTGTCAGTGAA
AATGAACCTATTATTTCTGAAAAGGTTGAAGTAGAAGTTACTGACGAACAAATTGTTAAACCAGAAAATGATGAAAAATT
AGAAAAAATTACTGACGAAAAAGTAATCTCTGAAACTACAGAAGTGACTGAGAAAAAAGTTACTGACGAAGATGAGGAAG
AAGAGATTATCATTGATATTGATGCTCTGGCTAATATTTTCACTCAATCACGTGAGGAAACTGAGAAAAAATATGAACAG
TCATTAACTTTAACTCGTAAGACTTTTTCTGACGGCTTTAATGAACTTTTTGCTAACTTCCGGACAGTTGATGAAGAATT
CTTTGAAGAACTTGAAGAAACATTAATTATGTCAGATGTCGGTGTGGATTTGGCAATGGAAGTGACTGAAGAATTGCGCA
AGGAAGCAAAATTAGTTAATGCTAAATCAACAGATGACTTGCGTCAATTGATTATTGAAAAAATTGTTGATAAGTTTGAC
GGTGAAAAATTACCGACAAAATTGGATATCCAATCGGATGGATTAAGTGTTTTCCTTTTTGTTGGGGTAAATGGTGTTGG
TAAAACAACGACCATTGGTAAATTAGCTGCTCGTTATAAAAATGAAGGCAAAAAAGTACTCTTAGCAGCTGCGGATACTT
TCCGGGCAGGTGCTATTGACCAATTAGTTGAATGGGGAAATCGTTCAGGCGTTGAAGTAGTCACAAAACCAGCTGGTTCA
GATCCAGCGGCAGTCGTTTTTGACGCTCTCGCAAAAGCTAAAGCTGAAAATTATGATATTTTACTTGTGGATACTGCAGG
ACGTTTGCAAAATAAAGATAATTTGATGAAAGAGCTGGAAAAAATTGGTAAAGTGATTAAACGAGAAATTCCAGATGCTC
CGCATGAAACGATTTTGGCACTTGATGCAACAACAGGCCAAAATGCCATTCAACAAGCCAAAGAATTTTCAGCAGTTACT
CCAATTACAGGAATTGCTCTGACTAAACTTGACGGTTCGGCAAAAGGTGGGATTGTCTTGTCAATCGTTCAAAGTCTTAA
AATTCCAGTTAAATTGATTGGTTTAGGTGAAAAGCTTAATGATTTACAAGATTTTGATGAAGAATTTTTCGTCAGAGGGC
TTTTCAAAGAGCTTTTATAA

Upstream 100 bases:

>100_bases
ATTTTAGGGCTTGCATTTTTAAGAAAAAAATTAAATTAAAATCTTTCATTATATGAATGAACTTTATCATCAAAATGTGA
TATTTTATTAAGGAGAAAAA

Downstream 100 bases:

>100_bases
AATATAAAATAAGAAGTAAAAAAAGTTTTGTTCAGTTTGGGCAATGCTTTTTTACTTGTCAACGGTTCCATTAAAATAAA
GCCGATGAGCGTTTGAAAAA

Product: signal recognition particle-docking protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MGLFDRLFGKKKQEETNHDVPVSENQSSEITEAVKNEKENETAKRPEVTEKPVKVEKVTDESVSKMIDVKPEITDEPVSE
NEPIISEKVEVEVTDEQIVKPENDEKLEKITDEKVISETTEVTEKKVTDEDEEEEIIIDIDALANIFTQSREETEKKYEQ
SLTLTRKTFSDGFNELFANFRTVDEEFFEELEETLIMSDVGVDLAMEVTEELRKEAKLVNAKSTDDLRQLIIEKIVDKFD
GEKLPTKLDIQSDGLSVFLFVGVNGVGKTTTIGKLAARYKNEGKKVLLAAADTFRAGAIDQLVEWGNRSGVEVVTKPAGS
DPAAVVFDALAKAKAENYDILLVDTAGRLQNKDNLMKELEKIGKVIKREIPDAPHETILALDATTGQNAIQQAKEFSAVT
PITGIALTKLDGSAKGGIVLSIVQSLKIPVKLIGLGEKLNDLQDFDEEFFVRGLFKELL

Sequences:

>Translated_459_residues
MGLFDRLFGKKKQEETNHDVPVSENQSSEITEAVKNEKENETAKRPEVTEKPVKVEKVTDESVSKMIDVKPEITDEPVSE
NEPIISEKVEVEVTDEQIVKPENDEKLEKITDEKVISETTEVTEKKVTDEDEEEEIIIDIDALANIFTQSREETEKKYEQ
SLTLTRKTFSDGFNELFANFRTVDEEFFEELEETLIMSDVGVDLAMEVTEELRKEAKLVNAKSTDDLRQLIIEKIVDKFD
GEKLPTKLDIQSDGLSVFLFVGVNGVGKTTTIGKLAARYKNEGKKVLLAAADTFRAGAIDQLVEWGNRSGVEVVTKPAGS
DPAAVVFDALAKAKAENYDILLVDTAGRLQNKDNLMKELEKIGKVIKREIPDAPHETILALDATTGQNAIQQAKEFSAVT
PITGIALTKLDGSAKGGIVLSIVQSLKIPVKLIGLGEKLNDLQDFDEEFFVRGLFKELL
>Mature_458_residues
GLFDRLFGKKKQEETNHDVPVSENQSSEITEAVKNEKENETAKRPEVTEKPVKVEKVTDESVSKMIDVKPEITDEPVSEN
EPIISEKVEVEVTDEQIVKPENDEKLEKITDEKVISETTEVTEKKVTDEDEEEEIIIDIDALANIFTQSREETEKKYEQS
LTLTRKTFSDGFNELFANFRTVDEEFFEELEETLIMSDVGVDLAMEVTEELRKEAKLVNAKSTDDLRQLIIEKIVDKFDG
EKLPTKLDIQSDGLSVFLFVGVNGVGKTTTIGKLAARYKNEGKKVLLAAADTFRAGAIDQLVEWGNRSGVEVVTKPAGSD
PAAVVFDALAKAKAENYDILLVDTAGRLQNKDNLMKELEKIGKVIKREIPDAPHETILALDATTGQNAIQQAKEFSAVTP
ITGIALTKLDGSAKGGIVLSIVQSLKIPVKLIGLGEKLNDLQDFDEEFFVRGLFKELL

Specific function: Required for normal cell growth and morphogenesis; translocation of at least 1 protein is impaired in its absence [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=290, Percent_Identity=32.4137931034483, Blast_Score=143, Evalue=4e-34,
Organism=Homo sapiens, GI226371618, Length=200, Percent_Identity=37.5, Blast_Score=139, Evalue=6e-33,
Organism=Homo sapiens, GI23308697, Length=308, Percent_Identity=29.8701298701299, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI295424842, Length=308, Percent_Identity=29.8701298701299, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=34.8148148148148, Blast_Score=89, Evalue=7e-18,
Organism=Escherichia coli, GI1789874, Length=299, Percent_Identity=44.8160535117057, Blast_Score=249, Evalue=3e-67,
Organism=Escherichia coli, GI1788963, Length=200, Percent_Identity=41, Blast_Score=140, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI17539958, Length=276, Percent_Identity=31.8840579710145, Blast_Score=135, Evalue=6e-32,
Organism=Caenorhabditis elegans, GI193206261, Length=296, Percent_Identity=29.3918918918919, Blast_Score=108, Evalue=5e-24,
Organism=Saccharomyces cerevisiae, GI6325345, Length=200, Percent_Identity=41, Blast_Score=153, Evalue=7e-38,
Organism=Saccharomyces cerevisiae, GI6320498, Length=227, Percent_Identity=30.3964757709251, Blast_Score=88, Evalue=3e-18,
Organism=Drosophila melanogaster, GI17647949, Length=200, Percent_Identity=36.5, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI24641198, Length=222, Percent_Identity=32.4324324324324, Blast_Score=97, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 51065; Mature: 50934

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFDRLFGKKKQEETNHDVPVSENQSSEITEAVKNEKENETAKRPEVTEKPVKVEKVTD
CCHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCEEECCCH
ESVSKMIDVKPEITDEPVSENEPIISEKVEVEVTDEQIVKPENDEKLEKITDEKVISETT
HHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHCCCCCHHHHHHHHHHHHHHHHH
EVTEKKVTDEDEEEEIIIDIDALANIFTQSREETEKKYEQSLTLTRKTFSDGFNELFANF
HHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTVDEEFFEELEETLIMSDVGVDLAMEVTEELRKEAKLVNAKSTDDLRQLIIEKIVDKFD
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
GEKLPTKLDIQSDGLSVFLFVGVNGVGKTTTIGKLAARYKNEGKKVLLAAADTFRAGAID
CCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHCCCHHH
QLVEWGNRSGVEVVTKPAGSDPAAVVFDALAKAKAENYDILLVDTAGRLQNKDNLMKELE
HHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHH
KIGKVIKREIPDAPHETILALDATTGQNAIQQAKEFSAVTPITGIALTKLDGSAKGGIVL
HHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHH
SIVQSLKIPVKLIGLGEKLNDLQDFDEEFFVRGLFKELL
HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
GLFDRLFGKKKQEETNHDVPVSENQSSEITEAVKNEKENETAKRPEVTEKPVKVEKVTD
CHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCEEECCCH
ESVSKMIDVKPEITDEPVSENEPIISEKVEVEVTDEQIVKPENDEKLEKITDEKVISETT
HHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHCCCCCHHHHHHHHHHHHHHHHH
EVTEKKVTDEDEEEEIIIDIDALANIFTQSREETEKKYEQSLTLTRKTFSDGFNELFANF
HHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTVDEEFFEELEETLIMSDVGVDLAMEVTEELRKEAKLVNAKSTDDLRQLIIEKIVDKFD
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
GEKLPTKLDIQSDGLSVFLFVGVNGVGKTTTIGKLAARYKNEGKKVLLAAADTFRAGAID
CCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHCCCHHH
QLVEWGNRSGVEVVTKPAGSDPAAVVFDALAKAKAENYDILLVDTAGRLQNKDNLMKELE
HHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHH
KIGKVIKREIPDAPHETILALDATTGQNAIQQAKEFSAVTPITGIALTKLDGSAKGGIVL
HHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHH
SIVQSLKIPVKLIGLGEKLNDLQDFDEEFFVRGLFKELL
HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584053; 9384377; 8654983 [H]