Click here to switch to the map view.

The map label for this gene is yidA [C]

Identifier: 125624303

GI number: 125624303

Start: 1468504

End: 1469319

Strand: Direct

Name: yidA [C]

Synonym: llmg_1497

Alternate gene names: 125624303

Gene position: 1468504-1469319 (Clockwise)

Preceding gene: 125624302

Following gene: 125624304

Centisome position: 58.06

GC content: 38.73

Gene sequence:

>816_bases
ATGATTAAACTCGTTGCTATTGACCTTGACGGAACTTTACTTGACCCAAATCGCCAAATTACTGCCGAAGTAAAATCTGC
TGTTAAAAAAGCCAAAGCGGCTGGTGTTAAAATTGTTATCACAACTGGTCGTCCTTTACCAGGTGTAGTTGACATCCTTA
AGGCACTTGAATTAACTGACCAAAGTGATTATGTCATTACTTACAATGGTGGATTGGTCCAACGTGCAACAGGTGAAGAA
TTTATCAAAGAAACGTTAAGTTCCGAAGATTGGCTAGACCTTGATGCGGCTGCCCGCAAAATTGGTCTCCCTATCCATGC
GATAACCCGCGAAGGAATCTACACTCCGAATCATGATGTTGGAAGATATACCGTTCAAGAAGCTCAAATGGTAAAAATGC
CACTTTATATTCGTCAGCCAGAAGATATCGCTGCTTTAGAAATTGCTAAGGTAATGATGGTTGATGAACAAGAGGCACTT
GATGATGGAATTGCTTATCTTCCCTTTGAATTTTTCGAACGTTACAATGTGGTTAAATCAACACCTTATTATTTAGAATT
TATGAATAAAAAAGCTAGTAAAGGGTCTGCGGTTAAACACTTAGCTGAAAAACTTTCTTTTGATTTAGATGAAGTCATGG
CCATCGGTGATGAAGAAAATGACCGTTCAATGCTTGAAGTTGCTGGTTGTCCCGTTGTAATGGAGAACGGAAAAACCGAA
CTGAAAAAAATCGCTAAGCACATCACAAAATCAAATGCCAAATCTGGTGTTGCTCATGCCATAAATGAATGGGTTTTAAA
AGATTACCAAGCTTAA

Upstream 100 bases:

>100_bases
GCTGACAAGTCTGTCAGTCAACAATTATCACTTGATGATAATCTTTAAGTACTGACCCAAAATTTATTATATTATATAGA
AATTAGAAAGAGATACTCTT

Downstream 100 bases:

>100_bases
TTAGCAAATTTATAAGCATTATTGTTTTCTCATCAACCTTGAAAGGTTATAATAAGATTATAGAAAGATATCACAAGATA
TCAGATAGATAAGTTTATCT

Product: putative hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MIKLVAIDLDGTLLDPNRQITAEVKSAVKKAKAAGVKIVITTGRPLPGVVDILKALELTDQSDYVITYNGGLVQRATGEE
FIKETLSSEDWLDLDAAARKIGLPIHAITREGIYTPNHDVGRYTVQEAQMVKMPLYIRQPEDIAALEIAKVMMVDEQEAL
DDGIAYLPFEFFERYNVVKSTPYYLEFMNKKASKGSAVKHLAEKLSFDLDEVMAIGDEENDRSMLEVAGCPVVMENGKTE
LKKIAKHITKSNAKSGVAHAINEWVLKDYQA

Sequences:

>Translated_271_residues
MIKLVAIDLDGTLLDPNRQITAEVKSAVKKAKAAGVKIVITTGRPLPGVVDILKALELTDQSDYVITYNGGLVQRATGEE
FIKETLSSEDWLDLDAAARKIGLPIHAITREGIYTPNHDVGRYTVQEAQMVKMPLYIRQPEDIAALEIAKVMMVDEQEAL
DDGIAYLPFEFFERYNVVKSTPYYLEFMNKKASKGSAVKHLAEKLSFDLDEVMAIGDEENDRSMLEVAGCPVVMENGKTE
LKKIAKHITKSNAKSGVAHAINEWVLKDYQA
>Mature_271_residues
MIKLVAIDLDGTLLDPNRQITAEVKSAVKKAKAAGVKIVITTGRPLPGVVDILKALELTDQSDYVITYNGGLVQRATGEE
FIKETLSSEDWLDLDAAARKIGLPIHAITREGIYTPNHDVGRYTVQEAQMVKMPLYIRQPEDIAALEIAKVMMVDEQEAL
DDGIAYLPFEFFERYNVVKSTPYYLEFMNKKASKGSAVKHLAEKLSFDLDEVMAIGDEENDRSMLEVAGCPVVMENGKTE
LKKIAKHITKSNAKSGVAHAINEWVLKDYQA

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=268, Percent_Identity=45.1492537313433, Blast_Score=232, Evalue=2e-62,
Organism=Escherichia coli, GI48994981, Length=279, Percent_Identity=29.0322580645161, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI87081741, Length=279, Percent_Identity=26.8817204301075, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 30072; Mature: 30072

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLVAIDLDGTLLDPNRQITAEVKSAVKKAKAAGVKIVITTGRPLPGVVDILKALELTD
CEEEEEEECCCEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHCCC
QSDYVITYNGGLVQRATGEEFIKETLSSEDWLDLDAAARKIGLPIHAITREGIYTPNHDV
CCCEEEEECCCEEECCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCC
GRYTVQEAQMVKMPLYIRQPEDIAALEIAKVMMVDEQEALDDGIAYLPFEFFERYNVVKS
CCEEHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCHHHHHCCCEECCHHHHHHHHHHCC
TPYYLEFMNKKASKGSAVKHLAEKLSFDLDEVMAIGDEENDRSMLEVAGCPVVMENGKTE
CHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHCCCCEEEECCHHH
LKKIAKHITKSNAKSGVAHAINEWVLKDYQA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKLVAIDLDGTLLDPNRQITAEVKSAVKKAKAAGVKIVITTGRPLPGVVDILKALELTD
CEEEEEEECCCEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHCCC
QSDYVITYNGGLVQRATGEEFIKETLSSEDWLDLDAAARKIGLPIHAITREGIYTPNHDV
CCCEEEEECCCEEECCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCC
GRYTVQEAQMVKMPLYIRQPEDIAALEIAKVMMVDEQEALDDGIAYLPFEFFERYNVVKS
CCEEHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCHHHHHCCCEECCHHHHHHHHHHCC
TPYYLEFMNKKASKGSAVKHLAEKLSFDLDEVMAIGDEENDRSMLEVAGCPVVMENGKTE
CHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHCCCCEEEECCHHH
LKKIAKHITKSNAKSGVAHAINEWVLKDYQA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA