| Definition | Lactococcus lactis subsp. cremoris MG1363, complete genome. |
|---|---|
| Accession | NC_009004 |
| Length | 2,529,478 |
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The map label for this gene is sle1 [H]
Identifier: 125624206
GI number: 125624206
Start: 1362027
End: 1364639
Strand: Reverse
Name: sle1 [H]
Synonym: llmg_1390
Alternate gene names: 125624206
Gene position: 1364639-1362027 (Counterclockwise)
Preceding gene: 125624207
Following gene: 125624205
Centisome position: 53.95
GC content: 38.81
Gene sequence:
>2613_bases ATGGATAAAAGAAGCAAAGAAAACTTTAAAGCTTCGCTCAATGTCCAGAAACGTGTCTCTGATGGAATTGATGCGAATGC CTTTAGAAAACCTCGACAAGCCACACAGCTTAGTAAGCAGACACTTAAAGAAAGCAAAAAAAATCTTAAAGTTCGGCGGA CAAACTACAGGAAGCTTAAAGCTGGTTCAGGTTTACAAGTTGTTGCAGCCAAAAAGAAATATCTTGAAGCAAAAGCTGAT AAAAATGCTTCTAAAGTGGTTTTTAAAAAAGCAAAGAAATCTGATCCAACACGAGCAGCAAACAAAGCGAAAGGCTATGC CAAGAATCAAGCCAAGCAAACAGCAGTCAACCACTTAGTGTTATCGCCTCTTGAAAAAGATGATACTTTAAGAGAAGGTT CAGACCTCTATAGAAAGACTCAACGTACCAAAAGTGGGTTAAAACTTTCTAAGGATGTTGTCACTTCTTCCGCTAAAGCT TCGGTTAATCTTTCAAAGCATACTTACGGTTTAGCCAATCGAAGTGTTAATATGGTTCGAGGTCGTGGGTTTGTCAGAAC TCCTTCTGAATTGGGTTTCAGAAGGCAAGCCGCAAAAAGAATGCGGAACTTTCAAAATAAGCTGAGTGCCGCAAGAAAGG CAAAAAAGGCGGAGCAAGGATTTTCTTTGATTCGGTCAATCTTAAAAGGCCAACAAACCCTGAGTCGTGCGTTTACTTTA ATCGTGACCTCCAAAGGATTACTCGTCGTTCTTGCCGTTATGTTTATATTGTGTCTCTTGGGAATCCTTAACATGGCCTC CTCTGTTCCAACAAAGCAAGATGATTTTCAACTGACAAAGTCTTGGACGTATTTCACAAAACTTGATGCAGAACAATCAG AGGATGGAAATAACTTCTACACGCCTTTGGATGATGTGATGTTTTATATGAATGACCAATTTGAAGATTATAATTTACAA GATCAAGTGCCTGTAGGTTCAAATGGTGCAGCACTTCCGAACCAAAATTATGAACAATATCTTACAGGTCTTTGGTCAGC CTTAAATGGCTCTTCTCCTGATTATAAGCTAACAACAATGGAGGCTTTGGAGACGGATAAGAGTTCTAAATATTATCTAT CTCTTGATGATTATTCAGATTTTAAAGAACGTGTTAATGAAGTAGGTTATGACAGCCTTGATGGTCAACTTCAATTTCCT TATCAAACAGAGAGTTTGGTTATCAATCGTAGATATGGCTACGAACGGAATGGAGAAAAAACTGAACTCCACTCAAGCAT TGATGTTAGTTCAGCACCAGGGCAAGATTTAACTTCACCAATGCACGGAATTGTTAATTCTGTGACTGACCCTAATACAT TGGTCATTTCTGAAGCTGAAAATGCACGGCTGACAATTGTTGGGATTAATAGCGGACGGTTTATTGGAGGTGAAACAGTA GATGCTGGAACACTTCTTGGTAAGGCCACAAAGTCAAGTCTTAATATGACCTATGAAAAATATAATGAAGATGATAAAAA ATGGGCAAAAGTTAATCCAGCATTTTATTTTCCTAAAGTGACCTATACTCAGTTTACCTCTTTAGCTTCAGATAGCTTTG ATCCAGGAAAAAGTGTTTCTGAACGTGCGGAGGCCGTTTATAATTTCTTAACCAAACTTGGCTATAAAAAAGAAGGAATT TGCGCTATCTTAGGTTCTTTTACTGAAGAATCTCAAATCAATCCTAAGCGAGCTGAAGGAGATTATTTATCTCCACCAGT TGGTGCTTCTGGAAATTCTTGGGATGATCCAGCTTGGTTGGCAATGGGTGGGTTGGATATTTACGGAAAATATCCAAACA TCCTTCATAGAGGGTTGGGGTTAGGTCAATGGACAGATACATCTGATGGTTCTGAAAGACACACTTTACTTTTAAATTAT GCCAAAGCAAAAAATAAAAAATGGTACGACTTAGACCTTCAGCTTGATTTTATGCTCAATGGAGATACTCCAGGGAATCA AACCATGTTTAAAAATACCGCTAGTAATGCCGTCTCTTCTTCAATTCCAGAACTGACCAACTACTTCTTGACTTACTGGG AAGGAAATCCAGGGGACAAGATTCAGGCACGTGTACAAGCCGCCCAAAATTGGTTCACTTACTTCTCAAATAATGGTGGC TCTGATGCGGATATGAGCGCATCATCAAAAGAACTCTTTGAGAAATATAAAGACAAAATTAAACCTCTCCCTTCTAATAA AGAAACACAACAAGGGCAAGGATGGCCTGGTAATGGCTATGAACCTGGGAATTGTACTTGGTATGTCTTTAATCGTCAAG CTCAAATTGGTCATAATATTAATGGCTATATGGGTAATGGTGGCCAATGGGGTTATAACTATACTAAAACTCCAGGAGCT ACAATTGATTCTAAACCACAAGTGGGAGATGCGGTAAGTTTCTCTCCAGGTGTTGCAGGGTCTAGTTCAGAATATGGTCA CGTGGCTCAAGTTGAAGTTGTCAATCCAGATGGTACATTTTTAGTTTCTGAAATGAACACTTTAGGCCTTTATTCAATGG GCTATCGAATGTTTAAACCAGGAGCAGGAATGACATTTGTTCACTTTAAATAA
Upstream 100 bases:
>100_bases GATTTATGCAGGAGGGGTTGTTGTTCCGTTTGAAAATACGATTCCTGAGGACACTCGTCTCTTTGAAATTATGAATACGG ACTCTAAGGGAGCTTAGAAA
Downstream 100 bases:
>100_bases AGGAGAGAAATGGAAGAAATAACTGAAGAAACACAAGTTTTGCTCAATAAAATTTATCGTGATTTCTTTTTTACCCTACG TTCTAGTTGGTTTAAAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 870; Mature: 870
Protein sequence:
>870_residues MDKRSKENFKASLNVQKRVSDGIDANAFRKPRQATQLSKQTLKESKKNLKVRRTNYRKLKAGSGLQVVAAKKKYLEAKAD KNASKVVFKKAKKSDPTRAANKAKGYAKNQAKQTAVNHLVLSPLEKDDTLREGSDLYRKTQRTKSGLKLSKDVVTSSAKA SVNLSKHTYGLANRSVNMVRGRGFVRTPSELGFRRQAAKRMRNFQNKLSAARKAKKAEQGFSLIRSILKGQQTLSRAFTL IVTSKGLLVVLAVMFILCLLGILNMASSVPTKQDDFQLTKSWTYFTKLDAEQSEDGNNFYTPLDDVMFYMNDQFEDYNLQ DQVPVGSNGAALPNQNYEQYLTGLWSALNGSSPDYKLTTMEALETDKSSKYYLSLDDYSDFKERVNEVGYDSLDGQLQFP YQTESLVINRRYGYERNGEKTELHSSIDVSSAPGQDLTSPMHGIVNSVTDPNTLVISEAENARLTIVGINSGRFIGGETV DAGTLLGKATKSSLNMTYEKYNEDDKKWAKVNPAFYFPKVTYTQFTSLASDSFDPGKSVSERAEAVYNFLTKLGYKKEGI CAILGSFTEESQINPKRAEGDYLSPPVGASGNSWDDPAWLAMGGLDIYGKYPNILHRGLGLGQWTDTSDGSERHTLLLNY AKAKNKKWYDLDLQLDFMLNGDTPGNQTMFKNTASNAVSSSIPELTNYFLTYWEGNPGDKIQARVQAAQNWFTYFSNNGG SDADMSASSKELFEKYKDKIKPLPSNKETQQGQGWPGNGYEPGNCTWYVFNRQAQIGHNINGYMGNGGQWGYNYTKTPGA TIDSKPQVGDAVSFSPGVAGSSSEYGHVAQVEVVNPDGTFLVSEMNTLGLYSMGYRMFKPGAGMTFVHFK
Sequences:
>Translated_870_residues MDKRSKENFKASLNVQKRVSDGIDANAFRKPRQATQLSKQTLKESKKNLKVRRTNYRKLKAGSGLQVVAAKKKYLEAKAD KNASKVVFKKAKKSDPTRAANKAKGYAKNQAKQTAVNHLVLSPLEKDDTLREGSDLYRKTQRTKSGLKLSKDVVTSSAKA SVNLSKHTYGLANRSVNMVRGRGFVRTPSELGFRRQAAKRMRNFQNKLSAARKAKKAEQGFSLIRSILKGQQTLSRAFTL IVTSKGLLVVLAVMFILCLLGILNMASSVPTKQDDFQLTKSWTYFTKLDAEQSEDGNNFYTPLDDVMFYMNDQFEDYNLQ DQVPVGSNGAALPNQNYEQYLTGLWSALNGSSPDYKLTTMEALETDKSSKYYLSLDDYSDFKERVNEVGYDSLDGQLQFP YQTESLVINRRYGYERNGEKTELHSSIDVSSAPGQDLTSPMHGIVNSVTDPNTLVISEAENARLTIVGINSGRFIGGETV DAGTLLGKATKSSLNMTYEKYNEDDKKWAKVNPAFYFPKVTYTQFTSLASDSFDPGKSVSERAEAVYNFLTKLGYKKEGI CAILGSFTEESQINPKRAEGDYLSPPVGASGNSWDDPAWLAMGGLDIYGKYPNILHRGLGLGQWTDTSDGSERHTLLLNY AKAKNKKWYDLDLQLDFMLNGDTPGNQTMFKNTASNAVSSSIPELTNYFLTYWEGNPGDKIQARVQAAQNWFTYFSNNGG SDADMSASSKELFEKYKDKIKPLPSNKETQQGQGWPGNGYEPGNCTWYVFNRQAQIGHNINGYMGNGGQWGYNYTKTPGA TIDSKPQVGDAVSFSPGVAGSSSEYGHVAQVEVVNPDGTFLVSEMNTLGLYSMGYRMFKPGAGMTFVHFK >Mature_870_residues MDKRSKENFKASLNVQKRVSDGIDANAFRKPRQATQLSKQTLKESKKNLKVRRTNYRKLKAGSGLQVVAAKKKYLEAKAD KNASKVVFKKAKKSDPTRAANKAKGYAKNQAKQTAVNHLVLSPLEKDDTLREGSDLYRKTQRTKSGLKLSKDVVTSSAKA SVNLSKHTYGLANRSVNMVRGRGFVRTPSELGFRRQAAKRMRNFQNKLSAARKAKKAEQGFSLIRSILKGQQTLSRAFTL IVTSKGLLVVLAVMFILCLLGILNMASSVPTKQDDFQLTKSWTYFTKLDAEQSEDGNNFYTPLDDVMFYMNDQFEDYNLQ DQVPVGSNGAALPNQNYEQYLTGLWSALNGSSPDYKLTTMEALETDKSSKYYLSLDDYSDFKERVNEVGYDSLDGQLQFP YQTESLVINRRYGYERNGEKTELHSSIDVSSAPGQDLTSPMHGIVNSVTDPNTLVISEAENARLTIVGINSGRFIGGETV DAGTLLGKATKSSLNMTYEKYNEDDKKWAKVNPAFYFPKVTYTQFTSLASDSFDPGKSVSERAEAVYNFLTKLGYKKEGI CAILGSFTEESQINPKRAEGDYLSPPVGASGNSWDDPAWLAMGGLDIYGKYPNILHRGLGLGQWTDTSDGSERHTLLLNY AKAKNKKWYDLDLQLDFMLNGDTPGNQTMFKNTASNAVSSSIPELTNYFLTYWEGNPGDKIQARVQAAQNWFTYFSNNGG SDADMSASSKELFEKYKDKIKPLPSNKETQQGQGWPGNGYEPGNCTWYVFNRQAQIGHNINGYMGNGGQWGYNYTKTPGA TIDSKPQVGDAVSFSPGVAGSSSEYGHVAQVEVVNPDGTFLVSEMNTLGLYSMGYRMFKPGAGMTFVHFK
Specific function: Peptidoglycan hydrolase involved in the splitting of the septum during cell division [H]
COG id: COG3942
COG function: function code R; Surface antigen
Gene ontology:
Cell location: Secreted. Cell surface (By similarity) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 peptidase C51 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007921 - InterPro: IPR018392 - InterPro: IPR002482 [H]
Pfam domain/function: PF05257 CHAP; PF01476 LysM [H]
EC number: =3.5.1.28 [H]
Molecular weight: Translated: 96608; Mature: 96608
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS50911 CHAP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKRSKENFKASLNVQKRVSDGIDANAFRKPRQATQLSKQTLKESKKNLKVRRTNYRKLK CCCCCCCCCEEECCHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHCCEEEECCCEEEE AGSGLQVVAAKKKYLEAKADKNASKVVFKKAKKSDPTRAANKAKGYAKNQAKQTAVNHLV CCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHH LSPLEKDDTLREGSDLYRKTQRTKSGLKLSKDVVTSSAKASVNLSKHTYGLANRSVNMVR HCCCCCCCCHHCCHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEECHHHHHHCCCCEEEEE GRGFVRTPSELGFRRQAAKRMRNFQNKLSAARKAKKAEQGFSLIRSILKGQQTLSRAFTL CCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE IVTSKGLLVVLAVMFILCLLGILNMASSVPTKQDDFQLTKSWTYFTKLDAEQSEDGNNFY EEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCEEEEEEECCCCCCCCCCCC TPLDDVMFYMNDQFEDYNLQDQVPVGSNGAALPNQNYEQYLTGLWSALNGSSPDYKLTTM CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEH EALETDKSSKYYLSLDDYSDFKERVNEVGYDSLDGQLQFPYQTESLVINRRYGYERNGEK HHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCH TELHSSIDVSSAPGQDLTSPMHGIVNSVTDPNTLVISEAENARLTIVGINSGRFIGGETV HHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCEECCCCC DAGTLLGKATKSSLNMTYEKYNEDDKKWAKVNPAFYFPKVTYTQFTSLASDSFDPGKSVS CHHHHHHHHHHHHHCCHHHHCCCCCHHHEECCCCEECCCCHHHHHHHHHCCCCCCCCHHH ERAEAVYNFLTKLGYKKEGICAILGSFTEESQINPKRAEGDYLSPPVGASGNSWDDPAWL HHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE AMGGLDIYGKYPNILHRGLGLGQWTDTSDGSERHTLLLNYAKAKNKKWYDLDLQLDFMLN EECCEEEECCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHCCCEEEEEEEEEEEEEC GDTPGNQTMFKNTASNAVSSSIPELTNYFLTYWEGNPGDKIQARVQAAQNWFTYFSNNGG CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCC SDADMSASSKELFEKYKDKIKPLPSNKETQQGQGWPGNGYEPGNCTWYVFNRQAQIGHNI CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHCCCCC NGYMGNGGQWGYNYTKTPGATIDSKPQVGDAVSFSPGVAGSSSEYGHVAQVEVVNPDGTF CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCE LVSEMNTLGLYSMGYRMFKPGAGMTFVHFK EEECCCHHHHHHHCCEEECCCCCEEEEEEC >Mature Secondary Structure MDKRSKENFKASLNVQKRVSDGIDANAFRKPRQATQLSKQTLKESKKNLKVRRTNYRKLK CCCCCCCCCEEECCHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHCCEEEECCCEEEE AGSGLQVVAAKKKYLEAKADKNASKVVFKKAKKSDPTRAANKAKGYAKNQAKQTAVNHLV CCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHH LSPLEKDDTLREGSDLYRKTQRTKSGLKLSKDVVTSSAKASVNLSKHTYGLANRSVNMVR HCCCCCCCCHHCCHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEECHHHHHHCCCCEEEEE GRGFVRTPSELGFRRQAAKRMRNFQNKLSAARKAKKAEQGFSLIRSILKGQQTLSRAFTL CCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE IVTSKGLLVVLAVMFILCLLGILNMASSVPTKQDDFQLTKSWTYFTKLDAEQSEDGNNFY EEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCEEEEEEECCCCCCCCCCCC TPLDDVMFYMNDQFEDYNLQDQVPVGSNGAALPNQNYEQYLTGLWSALNGSSPDYKLTTM CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEH EALETDKSSKYYLSLDDYSDFKERVNEVGYDSLDGQLQFPYQTESLVINRRYGYERNGEK HHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCH TELHSSIDVSSAPGQDLTSPMHGIVNSVTDPNTLVISEAENARLTIVGINSGRFIGGETV HHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCEECCCCC DAGTLLGKATKSSLNMTYEKYNEDDKKWAKVNPAFYFPKVTYTQFTSLASDSFDPGKSVS CHHHHHHHHHHHHHCCHHHHCCCCCHHHEECCCCEECCCCHHHHHHHHHCCCCCCCCHHH ERAEAVYNFLTKLGYKKEGICAILGSFTEESQINPKRAEGDYLSPPVGASGNSWDDPAWL HHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE AMGGLDIYGKYPNILHRGLGLGQWTDTSDGSERHTLLLNYAKAKNKKWYDLDLQLDFMLN EECCEEEECCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHCCCEEEEEEEEEEEEEC GDTPGNQTMFKNTASNAVSSSIPELTNYFLTYWEGNPGDKIQARVQAAQNWFTYFSNNGG CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCC SDADMSASSKELFEKYKDKIKPLPSNKETQQGQGWPGNGYEPGNCTWYVFNRQAQIGHNI CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHCCCCC NGYMGNGGQWGYNYTKTPGATIDSKPQVGDAVSFSPGVAGSSSEYGHVAQVEVVNPDGTF CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCE LVSEMNTLGLYSMGYRMFKPGAGMTFVHFK EEECCCHHHHHHHCCEEECCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA