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The map label for this gene is xerS [H]

Identifier: 125624180

GI number: 125624180

Start: 1334736

End: 1335809

Strand: Reverse

Name: xerS [H]

Synonym: llmg_1361

Alternate gene names: 125624180

Gene position: 1335809-1334736 (Counterclockwise)

Preceding gene: 125624181

Following gene: 125624179

Centisome position: 52.81

GC content: 31.84

Gene sequence:

>1074_bases
ATGCAAAGAGAAACAATAATGAAAAGAATCAATAAAAAGTTAAAAACAATGCCCTATTATATTCAAGAATATTGTAACTC
AAAATTATCCTATCCCTATAGTATTTGTACCATTGATGCCTATCTCAATGATTTTCAGATATTTTTAAAATGGATGATTA
ATGAGAAACTTACGTTTGGCTCTGAAATGCGAGAAATAAAGTTAGATGAATTAAATTCTCTGAAAAAAAGAGATGTAGAA
AACTATTTGAGTTATAGACGATTGGGGTTGATGTGCAAAGAATTCTCTGACAAACAAACTAGCCAAACTACAGTGATTAG
AAATCATGCTGCATTGAGGAGTTTATTTAAATATCTTTCAGAAGAAACAGAAAATGAGTATGGAGATGTTTACCTTGAAA
AAAATGTTATGCGTAAAGTAAAGTTAAAAAAGGTTCGAGATACACTTAATTACAGGGCTTCTAAGTTAAAAGGTAGACTT
TTGCTCGAAAATGATCCTCACGAATTATTAAATTTTGTAGAAAAAAAGTATGAATCTCATACAACTTCAGACGTGATGAG
GTGGAAATTTTTATGCAATAAAAAACGTGACTTAGCTATTCTAGCCTTATTTCTTGCTACTGGAATAAGGAAGTCAGAAT
TGATTGATACAAATGTTGAAGATTTAGTCATTGAAGATAAAGTGACAATAAGTGTATATAGAAAAGAAGGGAAGTTTGAT
GTTGTTGGAGTAGCTCCATTCGCCAAAAGATATTTGATAGAATATCTAGCTCAAAGAGAAAAAGTAGGTCACTTGTTAGA
GGGGAAAGAACCACTATTTGTTACAAAGTATTCAAATCAAATAAAACGGATATCTGATGCCTCTGTAGATAGTGTCGTTA
CGAAATATACTGCCGCTTTTAATGTTAGGGCAACCTCTCATGATTTGAGACACAGTTTTGCTACCAATCTATATCGTGTA
AGTAGGTCTTCAGGGGTCGTAGCGACACAACTAGGTCATAATTCAACCATGACTACTGATTTATACGTTCATTTAGTAGA
TGAAGAAATACAAGAACAATTAGAAAAGCTTTAA

Upstream 100 bases:

>100_bases
TAGCTAAGAAGGACTAGATTAATTCTTATAACATATTATTATATCTTCTCTAAATTATGATTCAGAATGTCTTGCTAAAT
TATCTGATATAATAAATTTT

Downstream 100 bases:

>100_bases
ACAGCTGATTTTTTTGTTTTTTATCTCTTCTATTTGATTTTTAAATTCATATATGCTATAATATGTTTATATGAAAGATG
AACCAAAATTTGAAATTTAT

Product: site-specific tyrosine recombinase XerS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MQRETIMKRINKKLKTMPYYIQEYCNSKLSYPYSICTIDAYLNDFQIFLKWMINEKLTFGSEMREIKLDELNSLKKRDVE
NYLSYRRLGLMCKEFSDKQTSQTTVIRNHAALRSLFKYLSEETENEYGDVYLEKNVMRKVKLKKVRDTLNYRASKLKGRL
LLENDPHELLNFVEKKYESHTTSDVMRWKFLCNKKRDLAILALFLATGIRKSELIDTNVEDLVIEDKVTISVYRKEGKFD
VVGVAPFAKRYLIEYLAQREKVGHLLEGKEPLFVTKYSNQIKRISDASVDSVVTKYTAAFNVRATSHDLRHSFATNLYRV
SRSSGVVATQLGHNSTMTTDLYVHLVDEEIQEQLEKL

Sequences:

>Translated_357_residues
MQRETIMKRINKKLKTMPYYIQEYCNSKLSYPYSICTIDAYLNDFQIFLKWMINEKLTFGSEMREIKLDELNSLKKRDVE
NYLSYRRLGLMCKEFSDKQTSQTTVIRNHAALRSLFKYLSEETENEYGDVYLEKNVMRKVKLKKVRDTLNYRASKLKGRL
LLENDPHELLNFVEKKYESHTTSDVMRWKFLCNKKRDLAILALFLATGIRKSELIDTNVEDLVIEDKVTISVYRKEGKFD
VVGVAPFAKRYLIEYLAQREKVGHLLEGKEPLFVTKYSNQIKRISDASVDSVVTKYTAAFNVRATSHDLRHSFATNLYRV
SRSSGVVATQLGHNSTMTTDLYVHLVDEEIQEQLEKL
>Mature_357_residues
MQRETIMKRINKKLKTMPYYIQEYCNSKLSYPYSICTIDAYLNDFQIFLKWMINEKLTFGSEMREIKLDELNSLKKRDVE
NYLSYRRLGLMCKEFSDKQTSQTTVIRNHAALRSLFKYLSEETENEYGDVYLEKNVMRKVKLKKVRDTLNYRASKLKGRL
LLENDPHELLNFVEKKYESHTTSDVMRWKFLCNKKRDLAILALFLATGIRKSELIDTNVEDLVIEDKVTISVYRKEGKFD
VVGVAPFAKRYLIEYLAQREKVGHLLEGKEPLFVTKYSNQIKRISDASVDSVVTKYTAAFNVRATSHDLRHSFATNLYRV
SRSSGVVATQLGHNSTMTTDLYVHLVDEEIQEQLEKL

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerS subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 41851; Mature: 41851

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRETIMKRINKKLKTMPYYIQEYCNSKLSYPYSICTIDAYLNDFQIFLKWMINEKLTFG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCC
SEMREIKLDELNSLKKRDVENYLSYRRLGLMCKEFSDKQTSQTTVIRNHAALRSLFKYLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
EETENEYGDVYLEKNVMRKVKLKKVRDTLNYRASKLKGRLLLENDPHELLNFVEKKYESH
HHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCC
TTSDVMRWKFLCNKKRDLAILALFLATGIRKSELIDTNVEDLVIEDKVTISVYRKEGKFD
CHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCCHHHEEEECCEEEEEEECCCCEE
VVGVAPFAKRYLIEYLAQREKVGHLLEGKEPLFVTKYSNQIKRISDASVDSVVTKYTAAF
EEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHE
NVRATSHDLRHSFATNLYRVSRSSGVVATQLGHNSTMTTDLYVHLVDEEIQEQLEKL
EEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEHHHHEEHHHHHHHHHHHCC
>Mature Secondary Structure
MQRETIMKRINKKLKTMPYYIQEYCNSKLSYPYSICTIDAYLNDFQIFLKWMINEKLTFG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCC
SEMREIKLDELNSLKKRDVENYLSYRRLGLMCKEFSDKQTSQTTVIRNHAALRSLFKYLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
EETENEYGDVYLEKNVMRKVKLKKVRDTLNYRASKLKGRLLLENDPHELLNFVEKKYESH
HHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCC
TTSDVMRWKFLCNKKRDLAILALFLATGIRKSELIDTNVEDLVIEDKVTISVYRKEGKFD
CHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCCHHHEEEECCEEEEEEECCCCEE
VVGVAPFAKRYLIEYLAQREKVGHLLEGKEPLFVTKYSNQIKRISDASVDSVVTKYTAAF
EEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHE
NVRATSHDLRHSFATNLYRVSRSSGVVATQLGHNSTMTTDLYVHLVDEEIQEQLEKL
EEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEHHHHEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]