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The map label for this gene is yidA [C]

Identifier: 125624070

GI number: 125624070

Start: 1216780

End: 1217592

Strand: Direct

Name: yidA [C]

Synonym: llmg_1245

Alternate gene names: 125624070

Gene position: 1216780-1217592 (Clockwise)

Preceding gene: 125624069

Following gene: 125624071

Centisome position: 48.1

GC content: 32.1

Gene sequence:

>813_bases
ATGATTCCAAAAATGATTTTTATGGATATTGATGGAACCTTAGTGGATGCAAATATGAAAATATCAGCCCTTGATAAAGA
CAGTATTTGTCAACTTATTGATCAAGGGACTCATGTATATCTTGCGACAGGTAGAAAATATCGAGCAGCAAAAGCTGTTG
CAAAAAATCTGCATTCACAAGTGAAAGTGATTGCTTCAAATGGTTGTGTTTATGATTGTGAGCAAAAATTAATAAAAAAT
CCATTGAATCTTGAAGCCTTAATTGAAGCTTTTGAAATTTGTCAAAGAAAAAATGTTTCCTTGTTTTTCTTTGGTCTGTC
AGAAACTTTTTATAGTAAAGACTTGCCGGATTACTTCAAAAATGAGGATAAAGGAAGATTAGTTTCAGAAGGAGAAAGAG
AATTTATCAAAATTTCTAACCTATATGATTTACAAAAGTTTTCAAATCTGATAATAAATGGAATCATAATTTCTGAGGAT
AATTTTGAAATTTTAGAAGAAATAAAAACCGAATTAGAAGTATCAGAGAATTTATCTGTTTCCTCGTCAGCCATAAATAA
TCTTGAATTGACCCCAAAATCAGTAACTAAGGCGACAGCAATCTCAGCCTTGCAAGATTATTATGGAGTAAATAAAGAAG
AGACAGTAGCCTTTGGTGATGGGATGAATGACCTTGAAATGTTTGGGCAAGTTCATTATTCGGTGGCGATGGGAAATGCC
TCAGAACTTGTTAAAAAAGAAGCCACTTATGAAACTTTGTCTAATCTAGACAGTGGAATTAGTCATTTCCTCAAATTTTT
AAGCAGTCAATAA

Upstream 100 bases:

>100_bases
ATGCCATTTGTTATCTTTTCAAATAAACTTGCACAAAAAGAAATGGTTGCCACAGAAGACTAAAGACAAAGCGATAAAAG
TTGATTTATAAAGGAGAAAT

Downstream 100 bases:

>100_bases
ATTTTGTTTTAAGTCTAGAAATAACATAAAAAATCTATCACAGAACTTTCTATGATAGATTTTTTATTAAGTGAAGATTT
ATTTTTGATAAATTGGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MIPKMIFMDIDGTLVDANMKISALDKDSICQLIDQGTHVYLATGRKYRAAKAVAKNLHSQVKVIASNGCVYDCEQKLIKN
PLNLEALIEAFEICQRKNVSLFFFGLSETFYSKDLPDYFKNEDKGRLVSEGEREFIKISNLYDLQKFSNLIINGIIISED
NFEILEEIKTELEVSENLSVSSSAINNLELTPKSVTKATAISALQDYYGVNKEETVAFGDGMNDLEMFGQVHYSVAMGNA
SELVKKEATYETLSNLDSGISHFLKFLSSQ

Sequences:

>Translated_270_residues
MIPKMIFMDIDGTLVDANMKISALDKDSICQLIDQGTHVYLATGRKYRAAKAVAKNLHSQVKVIASNGCVYDCEQKLIKN
PLNLEALIEAFEICQRKNVSLFFFGLSETFYSKDLPDYFKNEDKGRLVSEGEREFIKISNLYDLQKFSNLIINGIIISED
NFEILEEIKTELEVSENLSVSSSAINNLELTPKSVTKATAISALQDYYGVNKEETVAFGDGMNDLEMFGQVHYSVAMGNA
SELVKKEATYETLSNLDSGISHFLKFLSSQ
>Mature_270_residues
MIPKMIFMDIDGTLVDANMKISALDKDSICQLIDQGTHVYLATGRKYRAAKAVAKNLHSQVKVIASNGCVYDCEQKLIKN
PLNLEALIEAFEICQRKNVSLFFFGLSETFYSKDLPDYFKNEDKGRLVSEGEREFIKISNLYDLQKFSNLIINGIIISED
NFEILEEIKTELEVSENLSVSSSAINNLELTPKSVTKATAISALQDYYGVNKEETVAFGDGMNDLEMFGQVHYSVAMGNA
SELVKKEATYETLSNLDSGISHFLKFLSSQ

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=282, Percent_Identity=26.5957446808511, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI48994981, Length=271, Percent_Identity=23.9852398523985, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787043, Length=259, Percent_Identity=25.0965250965251, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1786982, Length=268, Percent_Identity=20.1492537313433, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87081790, Length=267, Percent_Identity=25.0936329588015, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 30209; Mature: 30209

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPKMIFMDIDGTLVDANMKISALDKDSICQLIDQGTHVYLATGRKYRAAKAVAKNLHSQ
CCCCEEEEECCCEEEECCEEEEECCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHH
VKVIASNGCVYDCEQKLIKNPLNLEALIEAFEICQRKNVSLFFFGLSETFYSKDLPDYFK
EEEEECCCCEEHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCCCHHHC
NEDKGRLVSEGEREFIKISNLYDLQKFSNLIINGIIISEDNFEILEEIKTELEVSENLSV
CCCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCC
SSSAINNLELTPKSVTKATAISALQDYYGVNKEETVAFGDGMNDLEMFGQVHYSVAMGNA
CHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHEEEECCH
SELVKKEATYETLSNLDSGISHFLKFLSSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIPKMIFMDIDGTLVDANMKISALDKDSICQLIDQGTHVYLATGRKYRAAKAVAKNLHSQ
CCCCEEEEECCCEEEECCEEEEECCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHH
VKVIASNGCVYDCEQKLIKNPLNLEALIEAFEICQRKNVSLFFFGLSETFYSKDLPDYFK
EEEEECCCCEEHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCCCHHHC
NEDKGRLVSEGEREFIKISNLYDLQKFSNLIINGIIISEDNFEILEEIKTELEVSENLSV
CCCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCC
SSSAINNLELTPKSVTKATAISALQDYYGVNKEETVAFGDGMNDLEMFGQVHYSVAMGNA
CHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHEEEECCH
SELVKKEATYETLSNLDSGISHFLKFLSSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]