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The map label for this gene is ydjG [H]

Identifier: 125623933

GI number: 125623933

Start: 1061888

End: 1063039

Strand: Reverse

Name: ydjG [H]

Synonym: llmg_1102

Alternate gene names: 125623933

Gene position: 1063039-1061888 (Counterclockwise)

Preceding gene: 125623934

Following gene: 125623932

Centisome position: 42.03

GC content: 38.11

Gene sequence:

>1152_bases
ATGAGCGAAAGCCAAGTTCTTACACATAAATGTCCAAATTGTGGGGGGCCACTACTATTTGAACCTAAAAATCAAAAATT
CCATTGTGAATATTGTGGCTCAACCTTTACTGAACAAGAAGTTTCTGACTTTGAAGCCAAACAAGAGGCGGCAAAAGTTA
CTGATGACCCCACACCATTCCCAACGGAGCACGATAAAACTAATCAAACCGATGATTTTTCTACTGACGAAACTGTCAGT
AACTCTGAAAGTACTGATGAGACTGCTGATGAAGAAATTGGACTCTTTTTATGTCCTTCTTGCGGTGCCGAAATCGTTAC
TGACGCTACAACTGCTTCAACTTGGTGCTATTATTGCCATAATCCTGTTGTTCTGAACGAACGTTTATCAGGTAAATTCC
TTCCCGAAAAAATACTCCCTTTTCAAATTGAGAGAAAAGCGGCTGAAGAACAATTTTTAGACTGGGTGGGTAAGAAAAAA
TTTGTGCCCAAAGCCTTTTTTGACAAAAAACAAATTCAAAATCTGTCAGGCGTTTATTTTCCTTATTGGGCCGTTGATGC
TGAATTATCTGGTGGAATTTCAGCACAAGCAACCAACTTACGCGTTTGGATTGTCGGAGATACTGAATACACCGAACACT
CCCAGTATGAGATTCAACGTGGTGGAGATACAGCTTTCAAAAATTTAATCAAAAATGCCTTGAAAAAAAATCTGTCAGAT
AAAATGGTTGGTGCTGTTCAACCTTTTGAAATGACTGCTGCTATTCCTTTTAAAAATCAATATCTTTCTGGCTTTTTAAC
CGAAAAAAGAGATATTGAATTTCCTGACATGAAAGAAAATGTAGAACGAGAATTTCGTCAATATGCTGATGGACTGATGG
AATCAACAATTGTTGGCTATACTTCTGTCAGTAACTTACAAAGTAACCAGCAGATTAAAAGTTTAGATGAAGATTATGTT
CTGCTCCCAATCTGGCTAGTGACTTACAAAGAAGCAGGAAATGACCGACTCTTTTACTATGCCATGAATGGTCAAACCGG
TAAAGTTGCCGGACTTTTACCAATTGATAAGAAAAAACTTTGGACAGTTGCGATTGGAATCTTTATGCTCGTCCTTCTTC
TTGGAATCATTGTGGGGTATCTGCTATCATGA

Upstream 100 bases:

>100_bases
GACTAAAAGTCCTGAATAAAACTTTTCATAGCGTAAGAGCTAGTTTTATTTCAATTCTTTTTGGCTGAGCAGAATTCATA
TCATAAAGTAAGGAGAAACG

Downstream 100 bases:

>100_bases
GAAAAAAAATAATTATCTTTTCCCTATTTTTCCTTAGCTTCTTCTTTTTACTGATCACTCCAAAAACTTCTGCGGCAACT
TTTCAGTCGGGAATTGAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MSESQVLTHKCPNCGGPLLFEPKNQKFHCEYCGSTFTEQEVSDFEAKQEAAKVTDDPTPFPTEHDKTNQTDDFSTDETVS
NSESTDETADEEIGLFLCPSCGAEIVTDATTASTWCYYCHNPVVLNERLSGKFLPEKILPFQIERKAAEEQFLDWVGKKK
FVPKAFFDKKQIQNLSGVYFPYWAVDAELSGGISAQATNLRVWIVGDTEYTEHSQYEIQRGGDTAFKNLIKNALKKNLSD
KMVGAVQPFEMTAAIPFKNQYLSGFLTEKRDIEFPDMKENVEREFRQYADGLMESTIVGYTSVSNLQSNQQIKSLDEDYV
LLPIWLVTYKEAGNDRLFYYAMNGQTGKVAGLLPIDKKKLWTVAIGIFMLVLLLGIIVGYLLS

Sequences:

>Translated_383_residues
MSESQVLTHKCPNCGGPLLFEPKNQKFHCEYCGSTFTEQEVSDFEAKQEAAKVTDDPTPFPTEHDKTNQTDDFSTDETVS
NSESTDETADEEIGLFLCPSCGAEIVTDATTASTWCYYCHNPVVLNERLSGKFLPEKILPFQIERKAAEEQFLDWVGKKK
FVPKAFFDKKQIQNLSGVYFPYWAVDAELSGGISAQATNLRVWIVGDTEYTEHSQYEIQRGGDTAFKNLIKNALKKNLSD
KMVGAVQPFEMTAAIPFKNQYLSGFLTEKRDIEFPDMKENVEREFRQYADGLMESTIVGYTSVSNLQSNQQIKSLDEDYV
LLPIWLVTYKEAGNDRLFYYAMNGQTGKVAGLLPIDKKKLWTVAIGIFMLVLLLGIIVGYLLS
>Mature_382_residues
SESQVLTHKCPNCGGPLLFEPKNQKFHCEYCGSTFTEQEVSDFEAKQEAAKVTDDPTPFPTEHDKTNQTDDFSTDETVSN
SESTDETADEEIGLFLCPSCGAEIVTDATTASTWCYYCHNPVVLNERLSGKFLPEKILPFQIERKAAEEQFLDWVGKKKF
VPKAFFDKKQIQNLSGVYFPYWAVDAELSGGISAQATNLRVWIVGDTEYTEHSQYEIQRGGDTAFKNLIKNALKKNLSDK
MVGAVQPFEMTAAIPFKNQYLSGFLTEKRDIEFPDMKENVEREFRQYADGLMESTIVGYTSVSNLQSNQQIKSLDEDYVL
LPIWLVTYKEAGNDRLFYYAMNGQTGKVAGLLPIDKKKLWTVAIGIFMLVLLLGIIVGYLLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004039
- InterPro:   IPR013137 [H]

Pfam domain/function: PF08271 TFIIB_Zn_Ribbon [H]

EC number: NA

Molecular weight: Translated: 43205; Mature: 43074

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESQVLTHKCPNCGGPLLFEPKNQKFHCEYCGSTFTEQEVSDFEAKQEAAKVTDDPTPF
CCCCCCHHHCCCCCCCCEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PTEHDKTNQTDDFSTDETVSNSESTDETADEEIGLFLCPSCGAEIVTDATTASTWCYYCH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEECCCCCCHHHCCCCCCCEEEEEEC
NPVVLNERLSGKFLPEKILPFQIERKAAEEQFLDWVGKKKFVPKAFFDKKQIQNLSGVYF
CCEEECCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHHHCCCCCCC
PYWAVDAELSGGISAQATNLRVWIVGDTEYTEHSQYEIQRGGDTAFKNLIKNALKKNLSD
EEEEEECHHCCCCEEEECEEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCHH
KMVGAVQPFEMTAAIPFKNQYLSGFLTEKRDIEFPDMKENVEREFRQYADGLMESTIVGY
HHHCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCH
TSVSNLQSNQQIKSLDEDYVLLPIWLVTYKEAGNDRLFYYAMNGQTGKVAGLLPIDKKKL
HHHHHCCCCHHHHHCCCCEEEEEEEEEEEEECCCCEEEEEEECCCCCCEEEECCCCCHHH
WTVAIGIFMLVLLLGIIVGYLLS
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SESQVLTHKCPNCGGPLLFEPKNQKFHCEYCGSTFTEQEVSDFEAKQEAAKVTDDPTPF
CCCCCHHHCCCCCCCCEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PTEHDKTNQTDDFSTDETVSNSESTDETADEEIGLFLCPSCGAEIVTDATTASTWCYYCH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEECCCCCCHHHCCCCCCCEEEEEEC
NPVVLNERLSGKFLPEKILPFQIERKAAEEQFLDWVGKKKFVPKAFFDKKQIQNLSGVYF
CCEEECCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHHHCCCCCCC
PYWAVDAELSGGISAQATNLRVWIVGDTEYTEHSQYEIQRGGDTAFKNLIKNALKKNLSD
EEEEEECHHCCCCEEEECEEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCHH
KMVGAVQPFEMTAAIPFKNQYLSGFLTEKRDIEFPDMKENVEREFRQYADGLMESTIVGY
HHHCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCH
TSVSNLQSNQQIKSLDEDYVLLPIWLVTYKEAGNDRLFYYAMNGQTGKVAGLLPIDKKKL
HHHHHCCCCHHHHHCCCCEEEEEEEEEEEEECCCCEEEEEEECCCCCCEEEECCCCCHHH
WTVAIGIFMLVLLLGIIVGYLLS
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9455482; 9384377 [H]