Click here to switch to the map view.

The map label for this gene is ypaA [H]

Identifier: 125623912

GI number: 125623912

Start: 1038629

End: 1038982

Strand: Direct

Name: ypaA [H]

Synonym: llmg_1081

Alternate gene names: 125623912

Gene position: 1038629-1038982 (Clockwise)

Preceding gene: 125623911

Following gene: 125623915

Centisome position: 41.06

GC content: 33.62

Gene sequence:

>354_bases
ATGATATCACTTATACTTATTATTATTGTGGCTTTGGAGCATTTGCTTTTTGGTTATATTGAGATGTTTGGGGCGACCGG
TTTACCGGCTAAGGCTTTTGGTTTTGAAGAGGCAGAGTTAAAAAATAAAACATTACAGGTCGCTTTATCTAATCAAGGAA
TTTATAATGTGGGACTTGGTTTGTTGATTATTGCTTTGACAATAGCTAATGCAAGTATTCCTGTATTAAGTTTGACAATG
ATTTTTGTTGTTTTGGTTGGTATTTATGGCGCCTTAACCGTTACGAAAAAAATATTTATAGTTCAAGCTCTCCCTGCTCT
TATCAGCTTAATTTTACTCTTTCTGTCAGTATAA

Upstream 100 bases:

>100_bases
GATAAAACCAGTAAGTACAATGATTTTCATCAGTATTTACCGGTTTTTTTATTTTTTTAATTTATATAATCTTGCTATAA
TTTAAATTAAGGAGATTTTT

Downstream 100 bases:

>100_bases
TTTTATCTTAAATTACTGACAAAAATAAAAAACCGTTGCATCAGCGGTTTTTTTATTTATTATCCCCTAAATAACAAATG
AGTGAGCATTAATATTCATC

Product: putative secreted protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MISLILIIIVALEHLLFGYIEMFGATGLPAKAFGFEEAELKNKTLQVALSNQGIYNVGLGLLIIALTIANASIPVLSLTM
IFVVLVGIYGALTVTKKIFIVQALPALISLILLFLSV

Sequences:

>Translated_117_residues
MISLILIIIVALEHLLFGYIEMFGATGLPAKAFGFEEAELKNKTLQVALSNQGIYNVGLGLLIIALTIANASIPVLSLTM
IFVVLVGIYGALTVTKKIFIVQALPALISLILLFLSV
>Mature_117_residues
MISLILIIIVALEHLLFGYIEMFGATGLPAKAFGFEEAELKNKTLQVALSNQGIYNVGLGLLIIALTIANASIPVLSLTM
IFVVLVGIYGALTVTKKIFIVQALPALISLILLFLSV

Specific function: Unknown

COG id: COG3759

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009732 [H]

Pfam domain/function: PF06993 DUF1304 [H]

EC number: NA

Molecular weight: Translated: 12501; Mature: 12501

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLILIIIVALEHLLFGYIEMFGATGLPAKAFGFEEAELKNKTLQVALSNQGIYNVGLG
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHCCHHEEEEECCCCCHHHHHH
LLIIALTIANASIPVLSLTMIFVVLVGIYGALTVTKKIFIVQALPALISLILLFLSV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MISLILIIIVALEHLLFGYIEMFGATGLPAKAFGFEEAELKNKTLQVALSNQGIYNVGLG
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHCCHHEEEEECCCCCHHHHHH
LLIIALTIANASIPVLSLTMIFVVLVGIYGALTVTKKIFIVQALPALISLILLFLSV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1400208; 11337471 [H]