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The map label for this gene is tnp712

Identifier: 125623906

GI number: 125623906

Start: 1033755

End: 1034978

Strand: Reverse

Name: tnp712

Synonym: llmg_1075

Alternate gene names: NA

Gene position: 1034978-1033755 (Counterclockwise)

Preceding gene: 125623907

Following gene: 125623905

Centisome position: 40.92

GC content: 39.87

Gene sequence:

>1224_bases
ATGAGAAAAGACATCCTAGAAAGTATAACCGAACATCTTATGACTGGAATTAAACCTAATTTCGCTGATATTGCCAGACG
CTATAATTGTGACTATCGGACGGTCAAACGTTATTATGACCTCGGAAAAGAAAAGACCCTTGAAGAAGCTTCAAAACGAA
GGGTCCCACCGTCACTTATTGAGAACTATAAATCAATCATTGAAGATAAACTCAAGCTTGGCTGCTCTGTGCGCTCAATT
TACTACTTCATCCAACTAAAAGGCTATCAAGGCTCATATACGACCGTCAAACGCTATGCCAGATTGATTCGAGAATCCTG
CAAACATAAAGCAACGATTCGAATTGAAACAACGCCTGGACTTTCTGCTCAAGTCGACTGGAAAGAAAATTTAAAACTGA
TCTCACGCAATGGTGAAGTGTTTACGATTAATATCTTTCTGTATATTCTTGGCTACTCTCGGATGAAGTATCTTCAATTG
ACCGTCGACCGTCTCCAACCCACACTCTTTGAGTGTCTCAATCACGCTTTTGAGAAATTCGGAGGTGTCCCTGAAGAAAT
TTGGTTTGACAATATGAAAACAGTGGTGGACCATTCTAAAAGTCAATTCTCAAATGTTGTTTTCAATGAACGATTCAGGC
AGTATGCAAAAGATGCTGGATTTAAACCCATTGCTTGTCGGCCATTCAGACCTCAAACCAAAGGTAAAGTAGAAGCGCTT
GCGAGAATTGTTGACCGCCTGCTTGTCTTTAACAATGAGTTTGAAGACCTTGAAGAATTACAAGCACTGGTCCAACAATT
GATGGAAGATTTGAATCATAAAGAAATCTCTCAAGCGATTGGAACCTCACCTTCTGAACGTCTTGACCAAGAGGCGTTGA
ATCTCAAGGCTTTTGATTTAGAGCTTCTCAAAGTTTATAGTCAATTGAGTGTTCCTTTGACTCGAAAAGTCTCTAAAGAG
GCACTTGTGATCTTTGAAGGGCGTAAATATTCAGTGCCGGTTAAATATATTGGACAGACCGTAACCTGTGAAAAAGAACA
AGAGGACCTTAAAGTCTATTGTGACCAACGCTTGATTGCTCGTCATCCTTTAAGCGACCGTCCCTTTAATTATCGCCGTG
AAGATTACGTTGAAATTCTTAAATCAGATGTCTTCAAACATCTTGAAGAAGACGAACTAGAGGCTTATGTGGATGAGAAT
CTTCAAGCCTACGATTTATTGTGA

Upstream 100 bases:

>100_bases
CAATGTATTTAAATATTTCTTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAA
ATTGTGATAGGCTTTTCCTT

Downstream 100 bases:

>100_bases
AGGGAGCGCTTATGACAACTTATCATCAATTACTCAACCAATTGGACCATTTAAAACTCGATCGTGTGCGTCAGCTCTTA
CCAGAGTTCTTAGATGAGCA

Product: transposase for insertion sequence element IS712E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MRKDILESITEHLMTGIKPNFADIARRYNCDYRTVKRYYDLGKEKTLEEASKRRVPPSLIENYKSIIEDKLKLGCSVRSI
YYFIQLKGYQGSYTTVKRYARLIRESCKHKATIRIETTPGLSAQVDWKENLKLISRNGEVFTINIFLYILGYSRMKYLQL
TVDRLQPTLFECLNHAFEKFGGVPEEIWFDNMKTVVDHSKSQFSNVVFNERFRQYAKDAGFKPIACRPFRPQTKGKVEAL
ARIVDRLLVFNNEFEDLEELQALVQQLMEDLNHKEISQAIGTSPSERLDQEALNLKAFDLELLKVYSQLSVPLTRKVSKE
ALVIFEGRKYSVPVKYIGQTVTCEKEQEDLKVYCDQRLIARHPLSDRPFNYRREDYVEILKSDVFKHLEEDELEAYVDEN
LQAYDLL

Sequences:

>Translated_407_residues
MRKDILESITEHLMTGIKPNFADIARRYNCDYRTVKRYYDLGKEKTLEEASKRRVPPSLIENYKSIIEDKLKLGCSVRSI
YYFIQLKGYQGSYTTVKRYARLIRESCKHKATIRIETTPGLSAQVDWKENLKLISRNGEVFTINIFLYILGYSRMKYLQL
TVDRLQPTLFECLNHAFEKFGGVPEEIWFDNMKTVVDHSKSQFSNVVFNERFRQYAKDAGFKPIACRPFRPQTKGKVEAL
ARIVDRLLVFNNEFEDLEELQALVQQLMEDLNHKEISQAIGTSPSERLDQEALNLKAFDLELLKVYSQLSVPLTRKVSKE
ALVIFEGRKYSVPVKYIGQTVTCEKEQEDLKVYCDQRLIARHPLSDRPFNYRREDYVEILKSDVFKHLEEDELEAYVDEN
LQAYDLL
>Mature_407_residues
MRKDILESITEHLMTGIKPNFADIARRYNCDYRTVKRYYDLGKEKTLEEASKRRVPPSLIENYKSIIEDKLKLGCSVRSI
YYFIQLKGYQGSYTTVKRYARLIRESCKHKATIRIETTPGLSAQVDWKENLKLISRNGEVFTINIFLYILGYSRMKYLQL
TVDRLQPTLFECLNHAFEKFGGVPEEIWFDNMKTVVDHSKSQFSNVVFNERFRQYAKDAGFKPIACRPFRPQTKGKVEAL
ARIVDRLLVFNNEFEDLEELQALVQQLMEDLNHKEISQAIGTSPSERLDQEALNLKAFDLELLKVYSQLSVPLTRKVSKE
ALVIFEGRKYSVPVKYIGQTVTCEKEQEDLKVYCDQRLIARHPLSDRPFNYRREDYVEILKSDVFKHLEEDELEAYVDEN
LQAYDLL

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017894
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 47745; Mature: 47745

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKDILESITEHLMTGIKPNFADIARRYNCDYRTVKRYYDLGKEKTLEEASKRRVPPSLI
CCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCCHHHH
ENYKSIIEDKLKLGCSVRSIYYFIQLKGYQGSYTTVKRYARLIRESCKHKATIRIETTPG
HHHHHHHHHHHHHCCCHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCC
LSAQVDWKENLKLISRNGEVFTINIFLYILGYSRMKYLQLTVDRLQPTLFECLNHAFEKF
CCEECCHHHCCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGVPEEIWFDNMKTVVDHSKSQFSNVVFNERFRQYAKDAGFKPIACRPFRPQTKGKVEAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHH
ARIVDRLLVFNNEFEDLEELQALVQQLMEDLNHKEISQAIGTSPSERLDQEALNLKAFDL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCHHHHH
ELLKVYSQLSVPLTRKVSKEALVIFEGRKYSVPVKYIGQTVTCEKEQEDLKVYCDQRLIA
HHHHHHHHHCCCHHHHCCCCEEEEECCCCEECCHHHCCCCCCCCCCHHHHHHHHHHHHHH
RHPLSDRPFNYRREDYVEILKSDVFKHLEEDELEAYVDENLQAYDLL
HCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure
MRKDILESITEHLMTGIKPNFADIARRYNCDYRTVKRYYDLGKEKTLEEASKRRVPPSLI
CCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCCHHHH
ENYKSIIEDKLKLGCSVRSIYYFIQLKGYQGSYTTVKRYARLIRESCKHKATIRIETTPG
HHHHHHHHHHHHHCCCHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCC
LSAQVDWKENLKLISRNGEVFTINIFLYILGYSRMKYLQLTVDRLQPTLFECLNHAFEKF
CCEECCHHHCCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGVPEEIWFDNMKTVVDHSKSQFSNVVFNERFRQYAKDAGFKPIACRPFRPQTKGKVEAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHH
ARIVDRLLVFNNEFEDLEELQALVQQLMEDLNHKEISQAIGTSPSERLDQEALNLKAFDL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCHHHHH
ELLKVYSQLSVPLTRKVSKEALVIFEGRKYSVPVKYIGQTVTCEKEQEDLKVYCDQRLIA
HHHHHHHHHCCCHHHHCCCCEEEEECCCCEECCHHHCCCCCCCCCCHHHHHHHHHHHHHH
RHPLSDRPFNYRREDYVEILKSDVFKHLEEDELEAYVDENLQAYDLL
HCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2174857 [H]